RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 IL15P40933 162 aaPredicted RBP18.26■□□□□ 0.51
NPHP4-211ENST00000622020 NCAPHQ15003 741 aa18.26■□□□□ 0.51
NPHP4-211ENST00000622020 TERF2Q15554 542 aa18.26■□□□□ 0.51
NPHP4-211ENST00000622020 CCDC82Q8N4S0 544 aa18.26■□□□□ 0.51
NPHP4-211ENST00000622020 SENP2Q9HC62 589 aa18.26■□□□□ 0.51
NPHP4-211ENST00000622020 NEDD4P46934 1319 aa18.26■□□□□ 0.51
NPHP4-211ENST00000622020 UBASH3AP57075 661 aa18.26■□□□□ 0.51
NPHP4-211ENST00000622020 ANTXR2P58335 489 aa18.26■□□□□ 0.51
NPHP4-211ENST00000622020 MICU3Q86XE3 530 aa18.26■□□□□ 0.51
NPHP4-211ENST00000622020 OSBPL5Q9H0X9 879 aaPredicted RBP18.26■□□□□ 0.51
NPHP4-211ENST00000622020 PDILTQ8N807 584 aa18.25■□□□□ 0.51
NPHP4-211ENST00000622020 TRERF1Q96PN7 1200 aa18.25■□□□□ 0.51
NPHP4-211ENST00000622020 SYKP43405 635 aa18.25■□□□□ 0.51
NPHP4-211ENST00000622020 NLRP12P59046 1061 aa18.25■□□□□ 0.51
NPHP4-211ENST00000622020 TPM4P67936 248 aa18.25■□□□□ 0.51
NPHP4-211ENST00000622020 SYNE4Q8N205 404 aa18.25■□□□□ 0.51
NPHP4-211ENST00000622020 H7C1W4 665 aa18.25■□□□□ 0.51
NPHP4-211ENST00000622020 ZNF213O14771 459 aa18.25■□□□□ 0.51
NPHP4-211ENST00000622020 TAF7LQ5H9L4 462 aa18.25■□□□□ 0.51
NPHP4-211ENST00000622020 XAGE2Q96GT9 111 aa18.25■□□□□ 0.51
NPHP4-211ENST00000622020 FOXN1O15353 648 aa18.24■□□□□ 0.51
NPHP4-211ENST00000622020 ATP2B1P20020 1258 aa18.24■□□□□ 0.51
NPHP4-211ENST00000622020 CCDC158Q5M9N0 1113 aa18.24■□□□□ 0.51
NPHP4-211ENST00000622020 AXDND1Q5T1B0 1012 aaPredicted RBP18.24■□□□□ 0.51
NPHP4-211ENST00000622020 FAM89AQ96GI7 184 aa18.24■□□□□ 0.51
NPHP4-211ENST00000622020 A0A1W2PQ27 194 aa18.24■□□□□ 0.51
NPHP4-211ENST00000622020 A0A1W2PQ64 194 aa18.24■□□□□ 0.51
NPHP4-211ENST00000622020 A0A1W2PQD8 194 aa18.24■□□□□ 0.51
NPHP4-211ENST00000622020 POLR3GO15318 223 aaPredicted RBP18.24■□□□□ 0.51
NPHP4-211ENST00000622020 CLCN6P51797 869 aa18.24■□□□□ 0.51
NPHP4-211ENST00000622020 KIF23Q02241 960 aaPredicted RBP18.24■□□□□ 0.51
NPHP4-211ENST00000622020 ATL3Q6DD88 541 aa18.24■□□□□ 0.51
NPHP4-211ENST00000622020 ALG1Q9BT22 464 aa18.24■□□□□ 0.51
NPHP4-211ENST00000622020 CCDC57Q2TAC2 916 aa18.23■□□□□ 0.51
NPHP4-211ENST00000622020 POLR3EQ9NVU0 708 aa18.23■□□□□ 0.51
NPHP4-211ENST00000622020 FANCLQ9NW38 375 aa18.23■□□□□ 0.51
NPHP4-211ENST00000622020 SEC31AO94979 1220 aaKnown RBP18.23■□□□□ 0.51
NPHP4-211ENST00000622020 GABPB1Q06547 395 aaPredicted RBP18.23■□□□□ 0.51
NPHP4-211ENST00000622020 CCDC150Q8NCX0 1101 aa18.23■□□□□ 0.51
NPHP4-211ENST00000622020 DCAF5Q96JK2 942 aa18.23■□□□□ 0.51
NPHP4-211ENST00000622020 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.23■□□□□ 0.51
NPHP4-211ENST00000622020 GPAA1O43292 621 aa18.23■□□□□ 0.51
NPHP4-211ENST00000622020 NCOA7Q8NI08 942 aa18.23■□□□□ 0.51
NPHP4-211ENST00000622020 IMPACTQ9P2X3 320 aa18.23■□□□□ 0.51
NPHP4-211ENST00000622020 FANCGO15287 622 aa18.22■□□□□ 0.51
NPHP4-211ENST00000622020 NRDCO43847 1150 aa18.22■□□□□ 0.51
NPHP4-211ENST00000622020 DHX16O60231 1041 aaKnown RBP18.22■□□□□ 0.51
NPHP4-211ENST00000622020 VPS37DQ86XT2 251 aa18.22■□□□□ 0.51
NPHP4-211ENST00000622020 CARD6Q9BX69 1037 aa18.22■□□□□ 0.51
NPHP4-211ENST00000622020 C5P01031 1676 aa18.22■□□□□ 0.51
NPHP4-211ENST00000622020 MEGF6O75095 1541 aa18.22■□□□□ 0.51
NPHP4-211ENST00000622020 ZNF827Q17R98 1081 aa18.22■□□□□ 0.51
NPHP4-211ENST00000622020 SHC4Q6S5L8 630 aa18.22■□□□□ 0.51
NPHP4-211ENST00000622020 HSD3B7Q9H2F3 369 aa18.22■□□□□ 0.51
NPHP4-211ENST00000622020 MRC1P22897 1456 aa18.21■□□□□ 0.51
NPHP4-211ENST00000622020 LAMA4Q16363 1823 aa18.21■□□□□ 0.51
NPHP4-211ENST00000622020 YEATS4O95619 227 aa18.21■□□□□ 0.51
NPHP4-211ENST00000622020 PROSER2Q86WR7 435 aaPredicted RBP18.21■□□□□ 0.51
NPHP4-211ENST00000622020 MB21D2Q8IYB1 491 aaPredicted RBP18.21■□□□□ 0.51
NPHP4-211ENST00000622020 MNS1Q8NEH6 495 aa18.21■□□□□ 0.51
NPHP4-211ENST00000622020 UBXN4Q92575 508 aa18.21■□□□□ 0.51
NPHP4-211ENST00000622020 B4E1Z4 1266 aa18.21■□□□□ 0.51
NPHP4-211ENST00000622020 IDH1O75874 414 aaKnown RBP18.21■□□□□ 0.51
NPHP4-211ENST00000622020 LONRF3Q496Y0 759 aa18.21■□□□□ 0.51
NPHP4-211ENST00000622020 NFXL1Q6ZNB6 911 aa18.21■□□□□ 0.51
NPHP4-211ENST00000622020 GTF2E1P29083 439 aaPredicted RBP18.2■□□□□ 0.5
NPHP4-211ENST00000622020 CDC27P30260 824 aa18.2■□□□□ 0.5
NPHP4-211ENST00000622020 CMTR1Q8N1G2 835 aaKnown RBP18.2■□□□□ 0.5
NPHP4-211ENST00000622020 ZSWIM4Q9H7M6 989 aa18.2■□□□□ 0.5
NPHP4-211ENST00000622020 CMA1P23946 247 aa18.2■□□□□ 0.5
NPHP4-211ENST00000622020 KRT40Q6A162 431 aa18.2■□□□□ 0.5
NPHP4-211ENST00000622020 CYB5R4Q7L1T6 521 aa18.2■□□□□ 0.5
NPHP4-211ENST00000622020 FOXP4Q8IVH2 680 aaPredicted RBP18.2■□□□□ 0.5
NPHP4-211ENST00000622020 TRMT44Q8IYL2 757 aaKnown RBP18.2■□□□□ 0.5
NPHP4-211ENST00000622020 TOP1P11387 765 aaKnown RBP18.2■□□□□ 0.5
NPHP4-211ENST00000622020 METAP2P50579 478 aaKnown RBP eCLIP18.2■□□□□ 0.5
NPHP4-211ENST00000622020 ADKP55263 362 aaKnown RBP18.2■□□□□ 0.5
NPHP4-211ENST00000622020 ETF1P62495 437 aaKnown RBP18.2■□□□□ 0.5
NPHP4-211ENST00000622020 TRDNQ13061 729 aa18.2■□□□□ 0.5
NPHP4-211ENST00000622020 RFX7Q2KHR2 1363 aa18.19■□□□□ 0.5
NPHP4-211ENST00000622020 PDE4BQ07343 736 aa18.19■□□□□ 0.5
NPHP4-211ENST00000622020 MAPK8IP2Q13387 824 aaPredicted RBP18.19■□□□□ 0.5
NPHP4-211ENST00000622020 KIF2AO00139 706 aaPredicted RBP18.19■□□□□ 0.5
NPHP4-211ENST00000622020 SLC39A14Q15043 492 aa18.19■□□□□ 0.5
NPHP4-211ENST00000622020 SLC9C2Q5TAH2 1124 aa18.19■□□□□ 0.5
NPHP4-211ENST00000622020 BRAPQ7Z569 592 aa18.19■□□□□ 0.5
NPHP4-211ENST00000622020 GRAMD1CQ8IYS0 662 aa18.19■□□□□ 0.5
NPHP4-211ENST00000622020 CNNM3Q8NE01 707 aa18.19■□□□□ 0.5
NPHP4-211ENST00000622020 L2HGDHQ9H9P8 463 aa18.19■□□□□ 0.5
NPHP4-211ENST00000622020 PCDHA5Q9Y5H7 936 aa18.19■□□□□ 0.5
NPHP4-211ENST00000622020 GPTP24298 496 aa18.18■□□□□ 0.5
NPHP4-211ENST00000622020 TBC1D10CQ8IV04 446 aa18.18■□□□□ 0.5
NPHP4-211ENST00000622020 ZCCHC17Q9NP64 241 aaKnown RBP18.18■□□□□ 0.5
NPHP4-211ENST00000622020 RGPD5Q99666 1765 aa18.18■□□□□ 0.5
NPHP4-211ENST00000622020 PSDA5PKW4 1024 aaPredicted RBP18.18■□□□□ 0.5
NPHP4-211ENST00000622020 CDK11BP21127 795 aaKnown RBP18.18■□□□□ 0.5
NPHP4-211ENST00000622020 GRIN1Q05586 938 aa18.18■□□□□ 0.5
NPHP4-211ENST00000622020 NOL10Q9BSC4 688 aaKnown RBP18.18■□□□□ 0.5
NPHP4-211ENST00000622020 DESI2Q9BSY9 194 aa18.18■□□□□ 0.5
NPHP4-211ENST00000622020 TOMM22Q9NS69 142 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms