RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 MAPKAPK5Q8IW41 473 aa14.75□□□□□ -0.05
SCAMP1-207ENST00000621999 AKT1S1Q96B36 256 aa14.75□□□□□ -0.05
SCAMP1-207ENST00000621999 MARF1Q9Y4F3 1742 aaKnown RBP14.75□□□□□ -0.05
SCAMP1-207ENST00000621999 TBC1D16Q8TBP0 767 aa14.75□□□□□ -0.05
SCAMP1-207ENST00000621999 STX8Q9UNK0 236 aa14.75□□□□□ -0.05
SCAMP1-207ENST00000621999 KCPQ6ZWJ8 1503 aa14.75□□□□□ -0.05
SCAMP1-207ENST00000621999 HMGB1P09429 215 aaKnown RBP14.75□□□□□ -0.05
SCAMP1-207ENST00000621999 DIXDC1Q155Q3 683 aa14.75□□□□□ -0.05
SCAMP1-207ENST00000621999 TGFBRAP1Q8WUH2 860 aa14.75□□□□□ -0.05
SCAMP1-207ENST00000621999 SDR42E1Q8WUS8 393 aa14.75□□□□□ -0.05
SCAMP1-207ENST00000621999 LMOD1P29536 600 aaPredicted RBP14.74□□□□□ -0.05
SCAMP1-207ENST00000621999 TM4SF1P30408 202 aa14.74□□□□□ -0.05
SCAMP1-207ENST00000621999 TEKT1Q969V4 418 aa14.74□□□□□ -0.05
SCAMP1-207ENST00000621999 PRDM1O75626 825 aa14.74□□□□□ -0.05
SCAMP1-207ENST00000621999 CYP2E1P05181 493 aaPredicted RBP14.74□□□□□ -0.05
SCAMP1-207ENST00000621999 DLGAP5Q15398 846 aa14.74□□□□□ -0.05
SCAMP1-207ENST00000621999 CCDC83Q8IWF9 413 aa14.74□□□□□ -0.05
SCAMP1-207ENST00000621999 DDX11Q96FC9 970 aa14.74□□□□□ -0.05
SCAMP1-207ENST00000621999 SCN11AQ9UI33 1791 aa14.74□□□□□ -0.05
SCAMP1-207ENST00000621999 PTH1RQ03431 593 aa14.74□□□□□ -0.05
SCAMP1-207ENST00000621999 COA1Q9GZY4 146 aa14.74□□□□□ -0.05
SCAMP1-207ENST00000621999 MAST3O60307 1309 aa14.74□□□□□ -0.05
SCAMP1-207ENST00000621999 USP54Q70EL1 1684 aa14.74□□□□□ -0.05
SCAMP1-207ENST00000621999 SEMA3EO15041 775 aa14.74□□□□□ -0.05
SCAMP1-207ENST00000621999 PRDX5P30044 214 aa14.74□□□□□ -0.05
SCAMP1-207ENST00000621999 CCT2P78371 535 aaKnown RBP14.74□□□□□ -0.05
SCAMP1-207ENST00000621999 TMEM67Q5HYA8 995 aa14.74□□□□□ -0.05
SCAMP1-207ENST00000621999 CCDC144CPQ8IYA2 1237 aa14.74□□□□□ -0.05
SCAMP1-207ENST00000621999 BRF1Q92994 677 aa14.74□□□□□ -0.05
SCAMP1-207ENST00000621999 VPS53Q5VIR6 699 aa14.73□□□□□ -0.05
SCAMP1-207ENST00000621999 USP40Q9NVE5 1235 aa14.73□□□□□ -0.05
SCAMP1-207ENST00000621999 MCM5P33992 734 aa14.73□□□□□ -0.05
SCAMP1-207ENST00000621999 NWD2Q9ULI1 1742 aa14.72□□□□□ -0.05
SCAMP1-207ENST00000621999 KLRK1P26718 216 aa14.72□□□□□ -0.05
SCAMP1-207ENST00000621999 DYNLL1P63167 89 aaKnown RBP14.72□□□□□ -0.05
SCAMP1-207ENST00000621999 UPF1Q92900 1129 aaKnown RBP eCLIP14.72□□□□□ -0.05
SCAMP1-207ENST00000621999 SF3A1Q15459 793 aaKnown RBP14.72□□□□□ -0.05
SCAMP1-207ENST00000621999 ZNF589Q86UQ0 364 aaPredicted RBP14.72□□□□□ -0.05
SCAMP1-207ENST00000621999 ESR2Q92731 530 aa14.72□□□□□ -0.05
SCAMP1-207ENST00000621999 OSBP2Q969R2 916 aa14.72□□□□□ -0.05
SCAMP1-207ENST00000621999 PUS7LQ9H0K6 701 aaKnown RBP14.72□□□□□ -0.05
SCAMP1-207ENST00000621999 CHMP5Q9NZZ3 219 aa14.72□□□□□ -0.05
SCAMP1-207ENST00000621999 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.72□□□□□ -0.05
SCAMP1-207ENST00000621999 DOT1LQ8TEK3 1739 aa14.72□□□□□ -0.05
SCAMP1-207ENST00000621999 RGL2O15211 777 aa14.71□□□□□ -0.05
SCAMP1-207ENST00000621999 TSPY3P0CV98 308 aa14.71□□□□□ -0.05
SCAMP1-207ENST00000621999 TSPY8P0CW00 308 aa14.71□□□□□ -0.05
SCAMP1-207ENST00000621999 BTDP43251 543 aa14.71□□□□□ -0.05
SCAMP1-207ENST00000621999 UBE3CQ15386 1083 aa14.71□□□□□ -0.05
SCAMP1-207ENST00000621999 ZRSR1Q15695 479 aaKnown RBP14.71□□□□□ -0.05
SCAMP1-207ENST00000621999 MICU3Q86XE3 530 aa14.71□□□□□ -0.05
SCAMP1-207ENST00000621999 ZKSCAN3Q9BRR0 538 aa14.71□□□□□ -0.05
SCAMP1-207ENST00000621999 SLC12A7Q9Y666 1083 aa14.71□□□□□ -0.05
SCAMP1-207ENST00000621999 ZSCAN31Q96LW9 406 aaPredicted RBP14.71□□□□□ -0.05
SCAMP1-207ENST00000621999 TBC1D2Q9BYX2 928 aa14.71□□□□□ -0.05
SCAMP1-207ENST00000621999 GLI3P10071 1580 aa14.71□□□□□ -0.05
SCAMP1-207ENST00000621999 USP17L12C9JPN9 530 aa14.71□□□□□ -0.05
SCAMP1-207ENST00000621999 USP17L21D6R901 530 aa14.71□□□□□ -0.05
SCAMP1-207ENST00000621999 ECE2O60344 883 aa14.71□□□□□ -0.05
SCAMP1-207ENST00000621999 HSPD1P10809 573 aaKnown RBP14.71□□□□□ -0.05
SCAMP1-207ENST00000621999 CTDSPL2Q05D32 466 aa14.71□□□□□ -0.05
SCAMP1-207ENST00000621999 STYK1Q6J9G0 422 aa14.71□□□□□ -0.05
SCAMP1-207ENST00000621999 LIMCH1Q9UPQ0 1083 aa14.71□□□□□ -0.05
SCAMP1-207ENST00000621999 USP17L3A6NCW0 530 aa14.71□□□□□ -0.06
SCAMP1-207ENST00000621999 USP17L4A6NCW7 530 aa14.71□□□□□ -0.06
SCAMP1-207ENST00000621999 H7C1D1 291 aa14.71□□□□□ -0.06
SCAMP1-207ENST00000621999 SLC27A2O14975 620 aa14.71□□□□□ -0.06
SCAMP1-207ENST00000621999 ATP2B1P20020 1258 aa14.71□□□□□ -0.06
SCAMP1-207ENST00000621999 ADD2P35612 726 aa14.71□□□□□ -0.06
SCAMP1-207ENST00000621999 MECOMQ03112 1051 aa14.71□□□□□ -0.06
SCAMP1-207ENST00000621999 USP17L1Q7RTZ2 530 aa14.71□□□□□ -0.06
SCAMP1-207ENST00000621999 WTIPA6NIX2 430 aaPredicted RBP14.7□□□□□ -0.06
SCAMP1-207ENST00000621999 GOLGA8BA8MQT2 603 aa14.7□□□□□ -0.06
SCAMP1-207ENST00000621999 MARCH6O60337 910 aa14.7□□□□□ -0.06
SCAMP1-207ENST00000621999 ZMYM1Q5SVZ6 1142 aa14.7□□□□□ -0.06
SCAMP1-207ENST00000621999 TRIM22Q8IYM9 498 aa14.7□□□□□ -0.06
SCAMP1-207ENST00000621999 KRT23Q9C075 422 aa14.7□□□□□ -0.06
SCAMP1-207ENST00000621999 CABP5Q9NP86 173 aa14.7□□□□□ -0.06
SCAMP1-207ENST00000621999 SAFBQ15424 915 aaKnown RBP eCLIP14.7□□□□□ -0.06
SCAMP1-207ENST00000621999 B4E1Z4 1266 aa14.7□□□□□ -0.06
SCAMP1-207ENST00000621999 PRC1O43663 620 aa14.7□□□□□ -0.06
SCAMP1-207ENST00000621999 CHGBP05060 677 aa14.7□□□□□ -0.06
SCAMP1-207ENST00000621999 ANAPC15P60006 121 aa14.7□□□□□ -0.06
SCAMP1-207ENST00000621999 DPY19L2Q6NUT2 758 aa14.7□□□□□ -0.06
SCAMP1-207ENST00000621999 PODNQ7Z5L7 613 aa14.7□□□□□ -0.06
SCAMP1-207ENST00000621999 TTC6Q86TZ1 520 aa14.7□□□□□ -0.06
SCAMP1-207ENST00000621999 TXNRD3Q86VQ6 643 aa14.7□□□□□ -0.06
SCAMP1-207ENST00000621999 Q6ZUG5 572 aa14.69□□□□□ -0.06
SCAMP1-207ENST00000621999 PATL2C9JE40 543 aaKnown RBP14.69□□□□□ -0.06
SCAMP1-207ENST00000621999 PRKAB2O43741 272 aa14.69□□□□□ -0.06
SCAMP1-207ENST00000621999 NECAB1Q8N987 351 aa14.69□□□□□ -0.06
SCAMP1-207ENST00000621999 CNNM2Q9H8M5 875 aa14.69□□□□□ -0.06
SCAMP1-207ENST00000621999 M0R2C6 588 aa14.69□□□□□ -0.06
SCAMP1-207ENST00000621999 FGAP02671 866 aa14.69□□□□□ -0.06
SCAMP1-207ENST00000621999 TNIP1Q15025 636 aa14.69□□□□□ -0.06
SCAMP1-207ENST00000621999 CLRN2A0PK11 232 aa14.69□□□□□ -0.06
SCAMP1-207ENST00000621999 LARP1BQ659C4 914 aaKnown RBP14.69□□□□□ -0.06
SCAMP1-207ENST00000621999 IFNL3Q8IZI9 196 aa14.69□□□□□ -0.06
SCAMP1-207ENST00000621999 POLLQ9UGP5 575 aa14.69□□□□□ -0.06
SCAMP1-207ENST00000621999 ATP6V1DQ9Y5K8 247 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms