RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 U3KPZ7 1027 aaPredicted RBP20.61■□□□□ 0.89
FAM3A-222ENST00000621967 CACNA1SQ13698 1873 aa20.61■□□□□ 0.89
FAM3A-222ENST00000621967 PPEF1O14829 653 aaPredicted RBP20.61■□□□□ 0.89
FAM3A-222ENST00000621967 ATG9AQ7Z3C6 839 aa20.61■□□□□ 0.89
FAM3A-222ENST00000621967 TICAM2Q86XR7 235 aa20.61■□□□□ 0.89
FAM3A-222ENST00000621967 KIAA1551Q9HCM1 1747 aa20.6■□□□□ 0.89
FAM3A-222ENST00000621967 KRT85P78386 507 aa20.6■□□□□ 0.89
FAM3A-222ENST00000621967 METTL24Q5JXM2 366 aa20.6■□□□□ 0.89
FAM3A-222ENST00000621967 GPR108Q9NPR9 543 aa20.6■□□□□ 0.89
FAM3A-222ENST00000621967 MROH5Q6ZUA9 1318 aa20.59■□□□□ 0.89
FAM3A-222ENST00000621967 MCMDC2Q4G0Z9 681 aa20.59■□□□□ 0.89
FAM3A-222ENST00000621967 TMC4Q7Z404 712 aa20.59■□□□□ 0.89
FAM3A-222ENST00000621967 FHDC1Q9C0D6 1143 aaPredicted RBP20.59■□□□□ 0.89
FAM3A-222ENST00000621967 RIPOR2Q9Y4F9 1068 aa20.59■□□□□ 0.89
FAM3A-222ENST00000621967 TTC6Q86TZ1 520 aa20.59■□□□□ 0.89
FAM3A-222ENST00000621967 KBTBD3Q8NAB2 608 aa20.59■□□□□ 0.89
FAM3A-222ENST00000621967 TMX4Q9H1E5 349 aaPredicted RBP20.59■□□□□ 0.89
FAM3A-222ENST00000621967 TTLL6Q8N841 843 aa20.58■□□□□ 0.88
FAM3A-222ENST00000621967 GTF3C6Q969F1 213 aa20.58■□□□□ 0.88
FAM3A-222ENST00000621967 NEK1Q96PY6 1258 aa20.58■□□□□ 0.88
FAM3A-222ENST00000621967 DNAJC2Q99543 621 aaKnown RBP20.58■□□□□ 0.88
FAM3A-222ENST00000621967 PIM2Q9P1W9 311 aa20.58■□□□□ 0.88
FAM3A-222ENST00000621967 CEP126Q9P2H0 1117 aa20.58■□□□□ 0.88
FAM3A-222ENST00000621967 NDUFB9Q9Y6M9 179 aa20.58■□□□□ 0.88
FAM3A-222ENST00000621967 GOLGB1Q14789 3259 aaKnown RBP20.57■□□□□ 0.88
FAM3A-222ENST00000621967 MYH7P12883 1935 aa20.57■□□□□ 0.88
FAM3A-222ENST00000621967 CYP21A2P08686 494 aa20.57■□□□□ 0.88
FAM3A-222ENST00000621967 KCNA3P22001 575 aa20.57■□□□□ 0.88
FAM3A-222ENST00000621967 CHRNDQ07001 517 aa20.57■□□□□ 0.88
FAM3A-222ENST00000621967 NLGN2Q8NFZ4 835 aa20.57■□□□□ 0.88
FAM3A-222ENST00000621967 USP25Q9UHP3 1055 aa20.57■□□□□ 0.88
FAM3A-222ENST00000621967 MINPP1Q9UNW1 487 aa20.57■□□□□ 0.88
FAM3A-222ENST00000621967 GIMAP6Q6P9H5 292 aa20.56■□□□□ 0.88
FAM3A-222ENST00000621967 CCDC129Q6ZRS4 1044 aa20.56■□□□□ 0.88
FAM3A-222ENST00000621967 SEC62Q99442 399 aaKnown RBP20.56■□□□□ 0.88
FAM3A-222ENST00000621967 ATP6V0A2Q9Y487 856 aa20.56■□□□□ 0.88
FAM3A-222ENST00000621967 CHGBP05060 677 aa20.55■□□□□ 0.88
FAM3A-222ENST00000621967 HELBQ8NG08 1087 aaPredicted RBP20.55■□□□□ 0.88
FAM3A-222ENST00000621967 ANKRD2Q9GZV1 360 aa20.55■□□□□ 0.88
FAM3A-222ENST00000621967 WWC3Q9ULE0 1092 aa20.55■□□□□ 0.88
FAM3A-222ENST00000621967 SLX4Q8IY92 1834 aa20.55■□□□□ 0.88
FAM3A-222ENST00000621967 PTMAP06454 111 aaKnown RBP20.55■□□□□ 0.88
FAM3A-222ENST00000621967 FERMT3Q86UX7 667 aa20.55■□□□□ 0.88
FAM3A-222ENST00000621967 SP8Q8IXZ3 490 aa20.55■□□□□ 0.88
FAM3A-222ENST00000621967 SCAND2PQ9GZW5 306 aaPredicted RBP20.55■□□□□ 0.88
FAM3A-222ENST00000621967 ANKIB1Q9P2G1 1089 aa20.55■□□□□ 0.88
FAM3A-222ENST00000621967 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.55■□□□□ 0.88
FAM3A-222ENST00000621967 PDE8BO95263 885 aa20.54■□□□□ 0.88
FAM3A-222ENST00000621967 DALRD3Q5D0E6 543 aaKnown RBP20.54■□□□□ 0.88
FAM3A-222ENST00000621967 HELLSQ9NRZ9 838 aa20.54■□□□□ 0.88
FAM3A-222ENST00000621967 ZNF219Q9P2Y4 722 aaPredicted RBP20.54■□□□□ 0.88
FAM3A-222ENST00000621967 LRRC37AA6NMS7 1700 aa20.54■□□□□ 0.88
FAM3A-222ENST00000621967 BRCA1P38398 1863 aaKnown RBP20.53■□□□□ 0.88
FAM3A-222ENST00000621967 KDM4AO75164 1064 aa20.53■□□□□ 0.88
FAM3A-222ENST00000621967 ADCY5O95622 1261 aa20.53■□□□□ 0.88
FAM3A-222ENST00000621967 STK3Q13188 491 aa20.53■□□□□ 0.88
FAM3A-222ENST00000621967 Q6ZUG5 572 aa20.53■□□□□ 0.88
FAM3A-222ENST00000621967 AKAP2Q9Y2D5 859 aa20.53■□□□□ 0.88
FAM3A-222ENST00000621967 A0A1B0GUL6 1792 aa20.53■□□□□ 0.88
FAM3A-222ENST00000621967 TPRNQ4KMQ1 711 aa20.53■□□□□ 0.88
FAM3A-222ENST00000621967 FAM173BQ6P4H8 233 aa20.53■□□□□ 0.88
FAM3A-222ENST00000621967 SLC51AQ86UW1 340 aa20.53■□□□□ 0.88
FAM3A-222ENST00000621967 VGLL2Q8N8G2 317 aa20.53■□□□□ 0.88
FAM3A-222ENST00000621967 SYT17Q9BSW7 474 aa20.53■□□□□ 0.88
FAM3A-222ENST00000621967 DSCC1Q9BVC3 393 aa20.53■□□□□ 0.88
FAM3A-222ENST00000621967 PAG1Q9NWQ8 432 aa20.53■□□□□ 0.88
FAM3A-222ENST00000621967 XDHP47989 1333 aa20.52■□□□□ 0.88
FAM3A-222ENST00000621967 HMGB1P09429 215 aaKnown RBP20.52■□□□□ 0.88
FAM3A-222ENST00000621967 PUM3Q15397 648 aaKnown RBP20.52■□□□□ 0.88
FAM3A-222ENST00000621967 STOX1Q6ZVD7 989 aa20.52■□□□□ 0.88
FAM3A-222ENST00000621967 ZMYM1Q5SVZ6 1142 aa20.51■□□□□ 0.87
FAM3A-222ENST00000621967 SMARCC2Q8TAQ2 1214 aa20.51■□□□□ 0.87
FAM3A-222ENST00000621967 C21orf2O43822 256 aa20.51■□□□□ 0.87
FAM3A-222ENST00000621967 JAK2O60674 1132 aa20.51■□□□□ 0.87
FAM3A-222ENST00000621967 CCDC192P0DO97 292 aa20.51■□□□□ 0.87
FAM3A-222ENST00000621967 LIG1P18858 919 aa20.51■□□□□ 0.87
FAM3A-222ENST00000621967 ATP2B3Q16720 1220 aa20.51■□□□□ 0.87
FAM3A-222ENST00000621967 OLFM4Q6UX06 510 aa20.51■□□□□ 0.87
FAM3A-222ENST00000621967 BCS1LQ9Y276 419 aa20.51■□□□□ 0.87
FAM3A-222ENST00000621967 GOLIM4O00461 696 aa20.5■□□□□ 0.87
FAM3A-222ENST00000621967 GPSM2P81274 684 aa20.5■□□□□ 0.87
FAM3A-222ENST00000621967 KIAA2012Q0VF49 1180 aa20.5■□□□□ 0.87
FAM3A-222ENST00000621967 RESTQ13127 1097 aa20.5■□□□□ 0.87
FAM3A-222ENST00000621967 CC2D2BQ6DHV5 1058 aa20.5■□□□□ 0.87
FAM3A-222ENST00000621967 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.5■□□□□ 0.87
FAM3A-222ENST00000621967 LEO1Q8WVC0 666 aaPredicted RBP20.5■□□□□ 0.87
FAM3A-222ENST00000621967 NEUROD6Q96NK8 337 aa20.5■□□□□ 0.87
FAM3A-222ENST00000621967 LLPHQ9BRT6 129 aaKnown RBP20.5■□□□□ 0.87
FAM3A-222ENST00000621967 AGXT2Q9BYV1 514 aa20.5■□□□□ 0.87
FAM3A-222ENST00000621967 NUP62CLQ9H1M0 184 aa20.5■□□□□ 0.87
FAM3A-222ENST00000621967 A0A1B0GUL7 405 aa20.49■□□□□ 0.87
FAM3A-222ENST00000621967 RRP9O43818 475 aaKnown RBP20.49■□□□□ 0.87
FAM3A-222ENST00000621967 PFKFB2O60825 505 aa20.49■□□□□ 0.87
FAM3A-222ENST00000621967 SPATA32Q96LK8 384 aa20.49■□□□□ 0.87
FAM3A-222ENST00000621967 TIMM10P62072 90 aa20.49■□□□□ 0.87
FAM3A-222ENST00000621967 MAP3K11Q16584 847 aa20.49■□□□□ 0.87
FAM3A-222ENST00000621967 SOGA3Q5TF21 947 aa20.49■□□□□ 0.87
FAM3A-222ENST00000621967 DPP8Q6V1X1 898 aaPredicted RBP20.49■□□□□ 0.87
FAM3A-222ENST00000621967 RBM43Q6ZSC3 357 aaKnown RBP20.49■□□□□ 0.87
FAM3A-222ENST00000621967 DHX32Q7L7V1 743 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms