RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 TEX11Q8IYF3 940 aa13□□□□□ -0.33
CLTC-215ENST00000621829 RANBP1P43487 201 aa12.99□□□□□ -0.33
CLTC-215ENST00000621829 TRPC3Q13507 836 aa12.99□□□□□ -0.33
CLTC-215ENST00000621829 NCOA7Q8NI08 942 aa12.99□□□□□ -0.33
CLTC-215ENST00000621829 DPH6Q7L8W6 267 aa12.99□□□□□ -0.33
CLTC-215ENST00000621829 SPATS2Q86XZ4 545 aaKnown RBP12.99□□□□□ -0.33
CLTC-215ENST00000621829 TTC21AQ8NDW8 1320 aa12.99□□□□□ -0.33
CLTC-215ENST00000621829 ZNF644Q9H582 1327 aaPredicted RBP12.99□□□□□ -0.33
CLTC-215ENST00000621829 INF2Q27J81 1249 aa12.99□□□□□ -0.33
CLTC-215ENST00000621829 RAPGEF1Q13905 1077 aa12.99□□□□□ -0.33
CLTC-215ENST00000621829 KRT71Q3SY84 523 aa12.99□□□□□ -0.33
CLTC-215ENST00000621829 ZNF530Q6P9A1 599 aaPredicted RBP12.99□□□□□ -0.33
CLTC-215ENST00000621829 ESYT1Q9BSJ8 1104 aa12.98□□□□□ -0.33
CLTC-215ENST00000621829 TTF2Q9UNY4 1162 aaKnown RBP12.98□□□□□ -0.33
CLTC-215ENST00000621829 MYL5Q02045 173 aa12.98□□□□□ -0.33
CLTC-215ENST00000621829 CCT6BQ92526 530 aa12.98□□□□□ -0.33
CLTC-215ENST00000621829 LRRC27Q9C0I9 530 aa12.98□□□□□ -0.33
CLTC-215ENST00000621829 I3L4J1 428 aa12.98□□□□□ -0.33
CLTC-215ENST00000621829 ANKRD20A3Q5VUR7 823 aa12.98□□□□□ -0.33
CLTC-215ENST00000621829 GPIHBP1Q8IV16 184 aa12.98□□□□□ -0.33
CLTC-215ENST00000621829 VCX3AQ9NNX9 186 aa12.98□□□□□ -0.33
CLTC-215ENST00000621829 AK2P54819 239 aa12.98□□□□□ -0.33
CLTC-215ENST00000621829 PAK2Q13177 524 aa12.98□□□□□ -0.33
CLTC-215ENST00000621829 MYD88Q99836 296 aa12.98□□□□□ -0.33
CLTC-215ENST00000621829 MAK16Q9BXY0 300 aaKnown RBP12.98□□□□□ -0.33
CLTC-215ENST00000621829 MAP3K12Q12852 859 aa12.98□□□□□ -0.33
CLTC-215ENST00000621829 GAS8O95995 478 aa12.98□□□□□ -0.33
CLTC-215ENST00000621829 PLIN2Q99541 437 aa12.98□□□□□ -0.33
CLTC-215ENST00000621829 DDX41Q9UJV9 622 aaKnown RBP12.98□□□□□ -0.33
CLTC-215ENST00000621829 LEO1Q8WVC0 666 aaPredicted RBP12.97□□□□□ -0.33
CLTC-215ENST00000621829 RNF41Q9H4P4 317 aaPredicted RBP12.97□□□□□ -0.33
CLTC-215ENST00000621829 SERPINB6P35237 376 aa12.97□□□□□ -0.33
CLTC-215ENST00000621829 MFSD6Q6ZSS7 791 aa12.97□□□□□ -0.33
CLTC-215ENST00000621829 TCP11Q8WWU5 503 aa12.97□□□□□ -0.33
CLTC-215ENST00000621829 IRAK4Q9NWZ3 460 aa12.97□□□□□ -0.33
CLTC-215ENST00000621829 LARSQ9P2J5 1176 aaKnown RBP12.97□□□□□ -0.33
CLTC-215ENST00000621829 PCDHB15Q9Y5E8 787 aa12.97□□□□□ -0.33
CLTC-215ENST00000621829 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.97□□□□□ -0.33
CLTC-215ENST00000621829 SNX16P57768 344 aa12.97□□□□□ -0.33
CLTC-215ENST00000621829 FANCCQ00597 558 aa12.97□□□□□ -0.33
CLTC-215ENST00000621829 CHST3Q7LGC8 479 aa12.97□□□□□ -0.33
CLTC-215ENST00000621829 NUTM2AQ8IVF1 878 aaPredicted RBP12.97□□□□□ -0.33
CLTC-215ENST00000621829 HINFPQ9BQA5 517 aa12.97□□□□□ -0.33
CLTC-215ENST00000621829 GOLGA8KD6RF30 607 aa12.97□□□□□ -0.33
CLTC-215ENST00000621829 PDE6BP35913 854 aa12.97□□□□□ -0.33
CLTC-215ENST00000621829 IGHMBP2P38935 993 aaKnown RBP12.97□□□□□ -0.33
CLTC-215ENST00000621829 TAF7Q15545 349 aaPredicted RBP12.97□□□□□ -0.33
CLTC-215ENST00000621829 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.97□□□□□ -0.33
CLTC-215ENST00000621829 TSC22D3Q99576 134 aa12.97□□□□□ -0.33
CLTC-215ENST00000621829 FAM204AQ9H8W3 233 aa12.97□□□□□ -0.33
CLTC-215ENST00000621829 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.97□□□□□ -0.33
CLTC-215ENST00000621829 ZNF445P59923 1031 aa12.97□□□□□ -0.33
CLTC-215ENST00000621829 C16orf71Q8IYS4 520 aaPredicted RBP12.97□□□□□ -0.33
CLTC-215ENST00000621829 RBM8AQ9Y5S9 174 aaKnown RBP12.97□□□□□ -0.33
CLTC-215ENST00000621829 BRD3Q15059 726 aa12.97□□□□□ -0.33
CLTC-215ENST00000621829 PRPF31Q8WWY3 499 aaKnown RBP12.97□□□□□ -0.33
CLTC-215ENST00000621829 SEC31AO94979 1220 aaKnown RBP12.97□□□□□ -0.33
CLTC-215ENST00000621829 IRX4P78413 519 aa12.97□□□□□ -0.33
CLTC-215ENST00000621829 ZKSCAN8Q15776 578 aaPredicted RBP12.97□□□□□ -0.33
CLTC-215ENST00000621829 CCDC14Q49A88 953 aa12.97□□□□□ -0.33
CLTC-215ENST00000621829 ZNF215Q9UL58 517 aaPredicted RBP12.97□□□□□ -0.33
CLTC-215ENST00000621829 TRIM35Q9UPQ4 493 aa12.97□□□□□ -0.33
CLTC-215ENST00000621829 APOEP02649 317 aa12.96□□□□□ -0.33
CLTC-215ENST00000621829 ITIH3Q06033 890 aa12.96□□□□□ -0.33
CLTC-215ENST00000621829 MTX1Q13505 466 aa12.96□□□□□ -0.33
CLTC-215ENST00000621829 RASA3Q14644 834 aa12.96□□□□□ -0.33
CLTC-215ENST00000621829 DCAF17Q5H9S7 520 aaPredicted RBP12.96□□□□□ -0.33
CLTC-215ENST00000621829 Q9H521 79 aa12.96□□□□□ -0.33
CLTC-215ENST00000621829 IMPACTQ9P2X3 320 aa12.96□□□□□ -0.33
CLTC-215ENST00000621829 WDR78Q5VTH9 848 aa12.96□□□□□ -0.33
CLTC-215ENST00000621829 KLHL14Q9P2G3 628 aa12.96□□□□□ -0.33
CLTC-215ENST00000621829 ZRANB1Q9UGI0 708 aa12.96□□□□□ -0.33
CLTC-215ENST00000621829 AGTPBP1Q9UPW5 1226 aa12.96□□□□□ -0.33
CLTC-215ENST00000621829 ECHDC1Q9NTX5 307 aa12.96□□□□□ -0.33
CLTC-215ENST00000621829 FAN1Q9Y2M0 1017 aa12.96□□□□□ -0.33
CLTC-215ENST00000621829 MYOM3Q5VTT5 1437 aa12.96□□□□□ -0.33
CLTC-215ENST00000621829 KRT15P19012 456 aa12.96□□□□□ -0.33
CLTC-215ENST00000621829 AKNAD1Q5T1N1 836 aa12.96□□□□□ -0.33
CLTC-215ENST00000621829 STX2P32856 288 aa12.96□□□□□ -0.34
CLTC-215ENST00000621829 CTNNA1P35221 906 aaKnown RBP12.96□□□□□ -0.34
CLTC-215ENST00000621829 NSD3Q9BZ95 1437 aa12.96□□□□□ -0.34
CLTC-215ENST00000621829 ZNF500O60304 480 aaPredicted RBP12.96□□□□□ -0.34
CLTC-215ENST00000621829 RNF40O75150 1001 aa12.96□□□□□ -0.34
CLTC-215ENST00000621829 GADD45BO75293 160 aaPredicted RBP12.96□□□□□ -0.34
CLTC-215ENST00000621829 PPFIA4O75335 1185 aa12.96□□□□□ -0.34
CLTC-215ENST00000621829 PDZD8Q8NEN9 1154 aa12.96□□□□□ -0.34
CLTC-215ENST00000621829 SECISBP2LQ93073 1101 aaKnown RBP12.96□□□□□ -0.34
CLTC-215ENST00000621829 PRAM1Q96QH2 718 aa12.96□□□□□ -0.34
CLTC-215ENST00000621829 TDRD9Q8NDG6 1382 aaKnown RBP12.96□□□□□ -0.34
CLTC-215ENST00000621829 RGS16O15492 202 aaPredicted RBP12.96□□□□□ -0.34
CLTC-215ENST00000621829 ZBTB43O43298 467 aa12.96□□□□□ -0.34
CLTC-215ENST00000621829 CRACR2BQ8N4Y2 399 aaPredicted RBP12.96□□□□□ -0.34
CLTC-215ENST00000621829 FYCO1Q9BQS8 1478 aa12.95□□□□□ -0.34
CLTC-215ENST00000621829 FAM71BQ8TC56 605 aa12.95□□□□□ -0.34
CLTC-215ENST00000621829 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.95□□□□□ -0.34
CLTC-215ENST00000621829 SPDL1Q96EA4 605 aa12.95□□□□□ -0.34
CLTC-215ENST00000621829 KAT14Q9H8E8 782 aa12.95□□□□□ -0.34
CLTC-215ENST00000621829 ANLNQ9NQW6 1124 aa12.95□□□□□ -0.34
CLTC-215ENST00000621829 PHEXP78562 749 aa12.95□□□□□ -0.34
CLTC-215ENST00000621829 CDK19Q9BWU1 502 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms