RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 FBXO3Q9UK99 471 aa29.96■■■□□ 2.39
ATXN3-253ENST00000621269 IREB2P48200 963 aaKnown RBP29.95■■■□□ 2.39
ATXN3-253ENST00000621269 HDLBPQ00341 1268 aaKnown RBP29.95■■■□□ 2.39
ATXN3-253ENST00000621269 SPRYD7Q5W111 196 aa29.95■■■□□ 2.39
ATXN3-253ENST00000621269 ATG9AQ7Z3C6 839 aa29.95■■■□□ 2.39
ATXN3-253ENST00000621269 LRRFIP2Q9Y608 721 aaKnown RBP29.95■■■□□ 2.39
ATXN3-253ENST00000621269 ARAP2Q8WZ64 1704 aa29.95■■■□□ 2.38
ATXN3-253ENST00000621269 SSC5DA1L4H1 1573 aa29.94■■■□□ 2.38
ATXN3-253ENST00000621269 UNCXA6NJT0 531 aa29.94■■■□□ 2.38
ATXN3-253ENST00000621269 CIAO1O76071 339 aa29.94■■■□□ 2.38
ATXN3-253ENST00000621269 GRIK5Q16478 980 aa29.94■■■□□ 2.38
ATXN3-253ENST00000621269 TNNI2P48788 182 aa29.93■■■□□ 2.38
ATXN3-253ENST00000621269 TEKT1Q969V4 418 aa29.93■■■□□ 2.38
ATXN3-253ENST00000621269 CEP126Q9P2H0 1117 aa29.93■■■□□ 2.38
ATXN3-253ENST00000621269 TCP10L2B9ZVM9 353 aa29.92■■■□□ 2.38
ATXN3-253ENST00000621269 TBC1D8O95759 1140 aa29.92■■■□□ 2.38
ATXN3-253ENST00000621269 SUGT1Q9Y2Z0 365 aa29.92■■■□□ 2.38
ATXN3-253ENST00000621269 IPO8O15397 1037 aaKnown RBP29.91■■■□□ 2.38
ATXN3-253ENST00000621269 INTS3Q68E01 1043 aaKnown RBP29.91■■■□□ 2.38
ATXN3-253ENST00000621269 CLMNQ96JQ2 1002 aa29.91■■■□□ 2.38
ATXN3-253ENST00000621269 MEIS3Q99687 375 aa29.91■■■□□ 2.38
ATXN3-253ENST00000621269 MAST3O60307 1309 aa29.91■■■□□ 2.38
ATXN3-253ENST00000621269 USP2O75604 605 aaPredicted RBP29.9■■■□□ 2.38
ATXN3-253ENST00000621269 MRIQ9BWK5 157 aa29.9■■■□□ 2.38
ATXN3-253ENST00000621269 MANSC4A6NHS7 340 aaPredicted RBP29.89■■■□□ 2.38
ATXN3-253ENST00000621269 GNAI3P08754 354 aa29.89■■■□□ 2.38
ATXN3-253ENST00000621269 ZBTB48P10074 688 aaPredicted RBP29.89■■■□□ 2.38
ATXN3-253ENST00000621269 IL15P40933 162 aaPredicted RBP29.89■■■□□ 2.38
ATXN3-253ENST00000621269 INHBEP58166 350 aa29.89■■■□□ 2.38
ATXN3-253ENST00000621269 ATP2B3Q16720 1220 aa29.89■■■□□ 2.38
ATXN3-253ENST00000621269 ANKRD13AQ8IZ07 590 aa29.89■■■□□ 2.38
ATXN3-253ENST00000621269 WDR66Q8TBY9 1149 aa29.89■■■□□ 2.38
ATXN3-253ENST00000621269 WNK4Q96J92 1243 aa29.89■■■□□ 2.38
ATXN3-253ENST00000621269 CTU1Q7Z7A3 348 aaKnown RBP29.88■■■□□ 2.37
ATXN3-253ENST00000621269 ZDHHC15Q96MV8 337 aa29.88■■■□□ 2.37
ATXN3-253ENST00000621269 GNL3LQ9NVN8 582 aaKnown RBP29.88■■■□□ 2.37
ATXN3-253ENST00000621269 TMOD2Q9NZR1 351 aa29.88■■■□□ 2.37
ATXN3-253ENST00000621269 ALDH1A1P00352 501 aa29.87■■■□□ 2.37
ATXN3-253ENST00000621269 TMEM39BQ9GZU3 492 aa29.87■■■□□ 2.37
ATXN3-253ENST00000621269 PA2G4Q9UQ80 394 aaKnown RBP29.87■■■□□ 2.37
ATXN3-253ENST00000621269 FRAT1Q92837 279 aaPredicted RBP29.86■■■□□ 2.37
ATXN3-253ENST00000621269 TEPSINQ96N21 525 aa29.86■■■□□ 2.37
ATXN3-253ENST00000621269 COPRSQ9NQ92 184 aa29.86■■■□□ 2.37
ATXN3-253ENST00000621269 ZNF296Q8WUU4 475 aaPredicted RBP29.85■■■□□ 2.37
ATXN3-253ENST00000621269 GPR25O00155 361 aa29.84■■■□□ 2.37
ATXN3-253ENST00000621269 HHIPL2Q6UWX4 724 aa29.84■■■□□ 2.37
ATXN3-253ENST00000621269 BCAR3O75815 825 aa29.83■■■□□ 2.37
ATXN3-253ENST00000621269 TRIM27P14373 513 aa29.83■■■□□ 2.37
ATXN3-253ENST00000621269 CACNB3P54284 484 aa29.83■■■□□ 2.37
ATXN3-253ENST00000621269 NOM1Q5C9Z4 860 aaKnown RBP29.83■■■□□ 2.37
ATXN3-253ENST00000621269 ATF7IPQ6VMQ6 1270 aa29.83■■■□□ 2.37
ATXN3-253ENST00000621269 IFNL1Q8IU54 200 aa29.83■■■□□ 2.37
ATXN3-253ENST00000621269 CDAN1Q8IWY9 1227 aa29.83■■■□□ 2.37
ATXN3-253ENST00000621269 CFHR5Q9BXR6 569 aa29.83■■■□□ 2.37
ATXN3-253ENST00000621269 SRGAP3O43295 1099 aa29.82■■■□□ 2.36
ATXN3-253ENST00000621269 APOBEC3HQ6NTF7 200 aaKnown RBP29.82■■■□□ 2.36
ATXN3-253ENST00000621269 MIER1Q8N108 512 aa29.82■■■□□ 2.36
ATXN3-253ENST00000621269 DIEXFQ68CQ4 756 aaKnown RBP29.81■■■□□ 2.36
ATXN3-253ENST00000621269 ELP3Q9H9T3 547 aa29.81■■■□□ 2.36
ATXN3-253ENST00000621269 DENND2AQ9ULE3 1009 aa29.81■■■□□ 2.36
ATXN3-253ENST00000621269 SEMA3EO15041 775 aa29.8■■■□□ 2.36
ATXN3-253ENST00000621269 HNRNPUQ00839 825 aaKnown RBP eCLIP29.8■■■□□ 2.36
ATXN3-253ENST00000621269 FKBP1CQ5VVH2 108 aa29.8■■■□□ 2.36
ATXN3-253ENST00000621269 FAM83AQ86UY5 434 aa29.8■■■□□ 2.36
ATXN3-253ENST00000621269 MAP3K9P80192 1104 aa29.79■■■□□ 2.36
ATXN3-253ENST00000621269 PKN2Q16513 984 aaKnown RBP29.79■■■□□ 2.36
ATXN3-253ENST00000621269 OTUD7BQ6GQQ9 843 aa29.79■■■□□ 2.36
ATXN3-253ENST00000621269 CLUAP1Q96AJ1 413 aa29.79■■■□□ 2.36
ATXN3-253ENST00000621269 HOOK2Q96ED9 719 aa29.79■■■□□ 2.36
ATXN3-253ENST00000621269 FKTNO75072 461 aa29.78■■■□□ 2.36
ATXN3-253ENST00000621269 LDHBP07195 334 aaKnown RBP29.78■■■□□ 2.36
ATXN3-253ENST00000621269 GJA5P36382 358 aa29.78■■■□□ 2.36
ATXN3-253ENST00000621269 PHKA1P46020 1223 aa29.78■■■□□ 2.36
ATXN3-253ENST00000621269 RGS19P49795 217 aa29.78■■■□□ 2.36
ATXN3-253ENST00000621269 MTX1Q13505 466 aa29.78■■■□□ 2.36
ATXN3-253ENST00000621269 OPTNQ96CV9 577 aa29.78■■■□□ 2.36
ATXN3-253ENST00000621269 CSADQ9Y600 493 aa29.78■■■□□ 2.36
ATXN3-253ENST00000621269 GNAI2P04899 355 aa29.77■■■□□ 2.36
ATXN3-253ENST00000621269 MLLT1Q03111 559 aaPredicted RBP29.77■■■□□ 2.36
ATXN3-253ENST00000621269 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.77■■■□□ 2.36
ATXN3-253ENST00000621269 R3HDMLQ9H3Y0 253 aa29.77■■■□□ 2.36
ATXN3-253ENST00000621269 TNNQ9UQP3 1299 aa29.77■■■□□ 2.36
ATXN3-253ENST00000621269 AKAP2Q9Y2D5 859 aa29.77■■■□□ 2.36
ATXN3-253ENST00000621269 IGF2BP3O00425 579 aaKnown RBP eCLIP29.76■■■□□ 2.35
ATXN3-253ENST00000621269 PRDX5P30044 214 aa29.76■■■□□ 2.35
ATXN3-253ENST00000621269 ADORA1P30542 326 aa29.76■■■□□ 2.35
ATXN3-253ENST00000621269 CCDC102BQ68D86 513 aa29.76■■■□□ 2.35
ATXN3-253ENST00000621269 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.76■■■□□ 2.35
ATXN3-253ENST00000621269 MYH13Q9UKX3 1938 aa29.76■■■□□ 2.35
ATXN3-253ENST00000621269 SALL1Q9NSC2 1324 aa29.75■■■□□ 2.35
ATXN3-253ENST00000621269 TIMM10P62072 90 aa29.75■■■□□ 2.35
ATXN3-253ENST00000621269 VGLL4Q14135 290 aa29.75■■■□□ 2.35
ATXN3-253ENST00000621269 DIXDC1Q155Q3 683 aa29.75■■■□□ 2.35
ATXN3-253ENST00000621269 ZKSCAN2Q63HK3 967 aa29.75■■■□□ 2.35
ATXN3-253ENST00000621269 DAGLAQ9Y4D2 1042 aa29.75■■■□□ 2.35
ATXN3-253ENST00000621269 TFCP2Q12800 502 aa29.74■■■□□ 2.35
ATXN3-253ENST00000621269 ZGPATQ8N5A5 531 aaKnown RBP29.74■■■□□ 2.35
ATXN3-253ENST00000621269 A0A1B0GUL7 405 aa29.72■■■□□ 2.35
ATXN3-253ENST00000621269 TESPA1A2RU30 521 aaPredicted RBP29.72■■■□□ 2.35
ATXN3-253ENST00000621269 ZBTB22O15209 634 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms