RNA–Protein interactions for RNA: ENST00000620505.1

TARDBP-222, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 657 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-222	ENST00000620505	TCP10L2	B9ZVM9	353 aa		11.04	□□□□□ -0.64
TARDBP-222	ENST00000620505	FKTN	O75072	461 aa		11.04	□□□□□ -0.64
TARDBP-222	ENST00000620505	USP2	O75604	605 aa	Predicted RBP	11.04	□□□□□ -0.64
TARDBP-222	ENST00000620505	FKBP1A	P62942	108 aa	Known RBP	11.04	□□□□□ -0.64
TARDBP-222	ENST00000620505	UBE4A	Q14139	1066 aa		11.04	□□□□□ -0.64
TARDBP-222	ENST00000620505	GRIK5	Q16478	980 aa		11.04	□□□□□ -0.64
TARDBP-222	ENST00000620505	SUPT20HL1	Q3ZLR7	823 aa		11.04	□□□□□ -0.64
TARDBP-222	ENST00000620505	CDAN1	Q8IWY9	1227 aa		11.04	□□□□□ -0.64
TARDBP-222	ENST00000620505	MRPL50	Q8N5N7	158 aa	Known RBP	11.04	□□□□□ -0.64
TARDBP-222	ENST00000620505	KLHDC4	Q8TBB5	520 aa		11.04	□□□□□ -0.64
TARDBP-222	ENST00000620505	ZNF70	Q9UC06	446 aa	Predicted RBP	11.04	□□□□□ -0.64
TARDBP-222	ENST00000620505	RIPOR2	Q9Y4F9	1068 aa		11.04	□□□□□ -0.64
TARDBP-222	ENST00000620505	CACNA1F	O60840	1977 aa		11.04	□□□□□ -0.64
TARDBP-222	ENST00000620505	COL1A1	P02452	1464 aa	Predicted RBP	11.04	□□□□□ -0.64
TARDBP-222	ENST00000620505	FAM205A	Q6ZU69	1335 aa		11.04	□□□□□ -0.64
TARDBP-222	ENST00000620505	MANSC4	A6NHS7	340 aa	Predicted RBP	11.03	□□□□□ -0.64
TARDBP-222	ENST00000620505	POTEM	A6NI47	508 aa		11.03	□□□□□ -0.64
TARDBP-222	ENST00000620505	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.03	□□□□□ -0.64
TARDBP-222	ENST00000620505	GJA5	P36382	358 aa		11.03	□□□□□ -0.64
TARDBP-222	ENST00000620505	IREB2	P48200	963 aa	Known RBP	11.03	□□□□□ -0.64
TARDBP-222	ENST00000620505	MAP3K11	Q16584	847 aa		11.03	□□□□□ -0.64
TARDBP-222	ENST00000620505	METTL24	Q5JXM2	366 aa		11.03	□□□□□ -0.64
TARDBP-222	ENST00000620505	VPS37D	Q86XT2	251 aa		11.03	□□□□□ -0.64
TARDBP-222	ENST00000620505	IFNL1	Q8IU54	200 aa		11.03	□□□□□ -0.64
TARDBP-222	ENST00000620505	ELP3	Q9H9T3	547 aa		11.03	□□□□□ -0.64
TARDBP-222	ENST00000620505	PPP2R3B	Q9Y5P8	575 aa		11.03	□□□□□ -0.64
TARDBP-222	ENST00000620505	FRAT2	O75474	233 aa	Predicted RBP	11.02	□□□□□ -0.65
TARDBP-222	ENST00000620505	CRK	P46108	304 aa		11.02	□□□□□ -0.65
TARDBP-222	ENST00000620505	CACNB3	P54284	484 aa		11.02	□□□□□ -0.65
TARDBP-222	ENST00000620505	PKN2	Q16513	984 aa	Known RBP	11.02	□□□□□ -0.65
TARDBP-222	ENST00000620505	DZIP1L	Q8IYY4	767 aa	Known RBP	11.02	□□□□□ -0.65
TARDBP-222	ENST00000620505	ANKRD44	Q8N8A2	993 aa		11.02	□□□□□ -0.65
TARDBP-222	ENST00000620505	TRIM17	Q9Y577	477 aa		11.02	□□□□□ -0.65
TARDBP-222	ENST00000620505	MROH5	Q6ZUA9	1318 aa		11.02	□□□□□ -0.65
TARDBP-222	ENST00000620505	ECM29	Q5VYK3	1845 aa		11.01	□□□□□ -0.65
TARDBP-222	ENST00000620505	ALDH1A1	P00352	501 aa		11.01	□□□□□ -0.65
TARDBP-222	ENST00000620505	BCAM	P50895	628 aa		11.01	□□□□□ -0.65
TARDBP-222	ENST00000620505	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.01	□□□□□ -0.65
TARDBP-222	ENST00000620505	FBXO33	Q7Z6M2	555 aa		11.01	□□□□□ -0.65
TARDBP-222	ENST00000620505	ANKRD13A	Q8IZ07	590 aa		11.01	□□□□□ -0.65
TARDBP-222	ENST00000620505	SSH1	Q8WYL5	1049 aa		11.01	□□□□□ -0.65
TARDBP-222	ENST00000620505	TMEM39B	Q9GZU3	492 aa		11.01	□□□□□ -0.65
TARDBP-222	ENST00000620505	UTY	O14607	1347 aa		11.01	□□□□□ -0.65
TARDBP-222	ENST00000620505	ZNF521	Q96K83	1311 aa		11.01	□□□□□ -0.65
TARDBP-222	ENST00000620505	SLC34A2	O95436	690 aa		11	□□□□□ -0.65
TARDBP-222	ENST00000620505	ZBTB48	P10074	688 aa	Predicted RBP	11	□□□□□ -0.65
TARDBP-222	ENST00000620505	INHBE	P58166	350 aa		11	□□□□□ -0.65
TARDBP-222	ENST00000620505	TNFAIP1	Q13829	316 aa		11	□□□□□ -0.65
TARDBP-222	ENST00000620505	RABL6	Q3YEC7	729 aa	Predicted RBP	11	□□□□□ -0.65
TARDBP-222	ENST00000620505	CAVIN4	Q5BKX8	364 aa		11	□□□□□ -0.65
TARDBP-222	ENST00000620505	NOM1	Q5C9Z4	860 aa	Known RBP	11	□□□□□ -0.65
TARDBP-222	ENST00000620505	CD99L2	Q8TCZ2	262 aa		11	□□□□□ -0.65
TARDBP-222	ENST00000620505	OPTN	Q96CV9	577 aa		11	□□□□□ -0.65
TARDBP-222	ENST00000620505	TEPSIN	Q96N21	525 aa		11	□□□□□ -0.65
TARDBP-222	ENST00000620505	PTPN18	Q99952	460 aa		11	□□□□□ -0.65
TARDBP-222	ENST00000620505	CFHR5	Q9BXR6	569 aa		11	□□□□□ -0.65
TARDBP-222	ENST00000620505	SERPINA10	Q9UK55	444 aa		11	□□□□□ -0.65
TARDBP-222	ENST00000620505	POTEB2	H3BUK9	544 aa		10.99	□□□□□ -0.65
TARDBP-222	ENST00000620505	PDE8B	O95263	885 aa		10.99	□□□□□ -0.65
TARDBP-222	ENST00000620505	CRHR2	Q13324	411 aa		10.99	□□□□□ -0.65
TARDBP-222	ENST00000620505	OTOP1	Q7RTM1	612 aa		10.99	□□□□□ -0.65
TARDBP-222	ENST00000620505	VGLL2	Q8N8G2	317 aa		10.99	□□□□□ -0.65
TARDBP-222	ENST00000620505	CDCA7L	Q96GN5	454 aa		10.99	□□□□□ -0.65
TARDBP-222	ENST00000620505	USP44	Q9H0E7	712 aa		10.99	□□□□□ -0.65
TARDBP-222	ENST00000620505	TNNI2	P48788	182 aa		10.98	□□□□□ -0.65
TARDBP-222	ENST00000620505	VGLL4	Q14135	290 aa		10.98	□□□□□ -0.65
TARDBP-222	ENST00000620505	OTUD7B	Q6GQQ9	843 aa		10.98	□□□□□ -0.65
TARDBP-222	ENST00000620505	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	10.98	□□□□□ -0.65
TARDBP-222	ENST00000620505	TEKT1	Q969V4	418 aa		10.98	□□□□□ -0.65
TARDBP-222	ENST00000620505	PTPRC	P08575	1304 aa		10.98	□□□□□ -0.65
TARDBP-222	ENST00000620505	ARAP2	Q8WZ64	1704 aa		10.98	□□□□□ -0.65
TARDBP-222	ENST00000620505	CCL15-CCL14	A0A0B4J2E2	113 aa		10.97	□□□□□ -0.65
TARDBP-222	ENST00000620505		E9PSI1	815 aa		10.97	□□□□□ -0.65
TARDBP-222	ENST00000620505	ECM2	O94769	699 aa	Predicted RBP	10.97	□□□□□ -0.65
TARDBP-222	ENST00000620505	IFIT1	P09914	478 aa	Known RBP	10.97	□□□□□ -0.65
TARDBP-222	ENST00000620505	MAP3K9	P80192	1104 aa		10.97	□□□□□ -0.65
TARDBP-222	ENST00000620505	CAP1	Q01518	475 aa		10.97	□□□□□ -0.65
TARDBP-222	ENST00000620505	SLFN5	Q08AF3	891 aa		10.97	□□□□□ -0.65
TARDBP-222	ENST00000620505	CCL15	Q16663	113 aa		10.97	□□□□□ -0.65
TARDBP-222	ENST00000620505	POTEG	Q6S5H5	508 aa		10.97	□□□□□ -0.65
TARDBP-222	ENST00000620505	TBC1D22A	Q8WUA7	517 aa		10.97	□□□□□ -0.65
TARDBP-222	ENST00000620505	SIL1	Q9H173	461 aa		10.97	□□□□□ -0.65
TARDBP-222	ENST00000620505	SMC4	Q9NTJ3	1288 aa		10.97	□□□□□ -0.65
TARDBP-222	ENST00000620505	CSAD	Q9Y600	493 aa		10.97	□□□□□ -0.65
TARDBP-222	ENST00000620505	OTOF	Q9HC10	1997 aa		10.97	□□□□□ -0.65
TARDBP-222	ENST00000620505	POTEF	A5A3E0	1075 aa		10.96	□□□□□ -0.65
TARDBP-222	ENST00000620505	UNCX	A6NJT0	531 aa		10.96	□□□□□ -0.65
TARDBP-222	ENST00000620505	EYA2	O00167	538 aa		10.96	□□□□□ -0.65
TARDBP-222	ENST00000620505	GALR2	O43603	387 aa	Predicted RBP	10.96	□□□□□ -0.65
TARDBP-222	ENST00000620505	FGFR2	P21802	821 aa		10.96	□□□□□ -0.65
TARDBP-222	ENST00000620505	RFX5	P48382	616 aa	Predicted RBP	10.96	□□□□□ -0.65
TARDBP-222	ENST00000620505	SP3	Q02447	781 aa		10.96	□□□□□ -0.65
TARDBP-222	ENST00000620505	PUM3	Q15397	648 aa	Known RBP	10.96	□□□□□ -0.65
TARDBP-222	ENST00000620505	FAM43A	Q8N2R8	423 aa		10.96	□□□□□ -0.65
TARDBP-222	ENST00000620505	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	10.96	□□□□□ -0.65	3e-13	■□□□□ 8.3
TARDBP-222	ENST00000620505	BRI3BP	Q8WY22	251 aa		10.96	□□□□□ -0.65
TARDBP-222	ENST00000620505	ERO1A	Q96HE7	468 aa		10.96	□□□□□ -0.65
TARDBP-222	ENST00000620505	MS4A4A	Q96JQ5	239 aa		10.96	□□□□□ -0.65
TARDBP-222	ENST00000620505	TMOD2	Q9NZR1	351 aa		10.96	□□□□□ -0.65
TARDBP-222	ENST00000620505	TESPA1	A2RU30	521 aa	Predicted RBP	10.95	□□□□□ -0.66

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