RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 ANAPC15P60006 121 aa18.3■□□□□ 0.52
SEMA3B-214ENST00000619119 CC2D1AQ6P1N0 951 aaPredicted RBP18.3■□□□□ 0.52
SEMA3B-214ENST00000619119 PPP1R13BQ96KQ4 1090 aa18.3■□□□□ 0.52
SEMA3B-214ENST00000619119 C8orf37Q96NL8 207 aa18.3■□□□□ 0.52
SEMA3B-214ENST00000619119 TEX13AQ9BXU3 409 aaPredicted RBP18.3■□□□□ 0.52
SEMA3B-214ENST00000619119 VPS18Q9P253 973 aa18.3■□□□□ 0.52
SEMA3B-214ENST00000619119 DNAI1Q9UI46 699 aa18.3■□□□□ 0.52
SEMA3B-214ENST00000619119 DBNLQ9UJU6 430 aaKnown RBP18.3■□□□□ 0.52
SEMA3B-214ENST00000619119 TUBGCP6Q96RT7 1819 aa18.3■□□□□ 0.52
SEMA3B-214ENST00000619119 CDC25BP30305 580 aa18.3■□□□□ 0.52
SEMA3B-214ENST00000619119 TCIRG1Q13488 830 aa18.3■□□□□ 0.52
SEMA3B-214ENST00000619119 TNNI3KQ59H18 835 aa18.3■□□□□ 0.52
SEMA3B-214ENST00000619119 IQUBQ8NA54 791 aa18.3■□□□□ 0.52
SEMA3B-214ENST00000619119 NEUROD6Q96NK8 337 aa18.3■□□□□ 0.52
SEMA3B-214ENST00000619119 PLEKHA4Q9H4M7 779 aa18.3■□□□□ 0.52
SEMA3B-214ENST00000619119 FPGT-TNNI3KV9GXZ4 949 aa18.3■□□□□ 0.52
SEMA3B-214ENST00000619119 PHLPP1O60346 1717 aa18.3■□□□□ 0.52
SEMA3B-214ENST00000619119 MMS22LQ6ZRQ5 1243 aa18.3■□□□□ 0.52
SEMA3B-214ENST00000619119 MTMR6Q9Y217 621 aa18.3■□□□□ 0.52
SEMA3B-214ENST00000619119 URI1O94763 535 aaPredicted RBP18.29■□□□□ 0.52
SEMA3B-214ENST00000619119 EVCP57679 992 aa18.29■□□□□ 0.52
SEMA3B-214ENST00000619119 CCDC83Q8IWF9 413 aa18.29■□□□□ 0.52
SEMA3B-214ENST00000619119 DBNDD2Q9BQY9 259 aa18.29■□□□□ 0.52
SEMA3B-214ENST00000619119 CYP19A1P11511 503 aaPredicted RBP18.29■□□□□ 0.52
SEMA3B-214ENST00000619119 LRRC24Q50LG9 513 aa18.29■□□□□ 0.52
SEMA3B-214ENST00000619119 MARCH10Q8NA82 808 aaPredicted RBP18.29■□□□□ 0.52
SEMA3B-214ENST00000619119 FAM227BQ96M60 508 aa18.29■□□□□ 0.52
SEMA3B-214ENST00000619119 FSD1Q9BTV5 496 aa18.29■□□□□ 0.52
SEMA3B-214ENST00000619119 PAPPAQ13219 1627 aa18.28■□□□□ 0.52
SEMA3B-214ENST00000619119 GJB2P29033 226 aa18.28■□□□□ 0.52
SEMA3B-214ENST00000619119 E4F1Q66K89 784 aaPredicted RBP18.28■□□□□ 0.52
SEMA3B-214ENST00000619119 FAM98CQ17RN3 349 aaKnown RBP18.28■□□□□ 0.52
SEMA3B-214ENST00000619119 SKIDA1Q1XH10 827 aa18.28■□□□□ 0.52
SEMA3B-214ENST00000619119 EVI5LQ96CN4 794 aa18.28■□□□□ 0.52
SEMA3B-214ENST00000619119 HSP90B1P14625 803 aaKnown RBP18.28■□□□□ 0.52
SEMA3B-214ENST00000619119 AK2P54819 239 aa18.28■□□□□ 0.52
SEMA3B-214ENST00000619119 GSCP56915 257 aaPredicted RBP18.28■□□□□ 0.52
SEMA3B-214ENST00000619119 SUGP1Q8IWZ8 645 aaKnown RBP18.28■□□□□ 0.52
SEMA3B-214ENST00000619119 PUS3Q9BZE2 481 aaKnown RBP18.28■□□□□ 0.52
SEMA3B-214ENST00000619119 PSD3Q9NYI0 1048 aa18.28■□□□□ 0.52
SEMA3B-214ENST00000619119 TADA3O75528 432 aa18.27■□□□□ 0.52
SEMA3B-214ENST00000619119 TIMM10P62072 90 aa18.27■□□□□ 0.52
SEMA3B-214ENST00000619119 ISCA1Q9BUE6 129 aa18.27■□□□□ 0.52
SEMA3B-214ENST00000619119 ITGB4P16144 1822 aa18.27■□□□□ 0.52
SEMA3B-214ENST00000619119 MICALL1Q8N3F8 863 aa18.27■□□□□ 0.51
SEMA3B-214ENST00000619119 NGLY1Q96IV0 654 aa18.27■□□□□ 0.51
SEMA3B-214ENST00000619119 ARFGAP3Q9NP61 516 aa18.27■□□□□ 0.51
SEMA3B-214ENST00000619119 A0A087WWV3 80 aa18.26■□□□□ 0.51
SEMA3B-214ENST00000619119 ATP8B1O43520 1251 aa18.26■□□□□ 0.51
SEMA3B-214ENST00000619119 LARGE1O95461 756 aa18.26■□□□□ 0.51
SEMA3B-214ENST00000619119 CHGBP05060 677 aa18.26■□□□□ 0.51
SEMA3B-214ENST00000619119 CORO7P57737 925 aa18.26■□□□□ 0.51
SEMA3B-214ENST00000619119 PTH1RQ03431 593 aa18.26■□□□□ 0.51
SEMA3B-214ENST00000619119 ZSCAN16Q9H4T2 348 aaPredicted RBP18.26■□□□□ 0.51
SEMA3B-214ENST00000619119 GOLIM4O00461 696 aa18.26■□□□□ 0.51
SEMA3B-214ENST00000619119 KCNQ2O43526 872 aa18.26■□□□□ 0.51
SEMA3B-214ENST00000619119 KIF1CO43896 1103 aaKnown RBP18.26■□□□□ 0.51
SEMA3B-214ENST00000619119 CPA1P15085 419 aa18.26■□□□□ 0.51
SEMA3B-214ENST00000619119 KRT85P78386 507 aa18.26■□□□□ 0.51
SEMA3B-214ENST00000619119 PPP2R5AQ15172 486 aa18.26■□□□□ 0.51
SEMA3B-214ENST00000619119 MRFAP1L1Q96HT8 127 aa18.26■□□□□ 0.51
SEMA3B-214ENST00000619119 LSG1Q9H089 658 aaKnown RBP18.26■□□□□ 0.51
SEMA3B-214ENST00000619119 MNAT1P51948 309 aa18.26■□□□□ 0.51
SEMA3B-214ENST00000619119 NMIQ13287 307 aaPredicted RBP18.26■□□□□ 0.51
SEMA3B-214ENST00000619119 SWT1Q5T5J6 900 aaKnown RBP18.26■□□□□ 0.51
SEMA3B-214ENST00000619119 C11orf57Q6ZUT1 292 aaPredicted RBP18.26■□□□□ 0.51
SEMA3B-214ENST00000619119 FBXW7Q969H0 707 aa18.26■□□□□ 0.51
SEMA3B-214ENST00000619119 TFIP11Q9UBB9 837 aaKnown RBP18.26■□□□□ 0.51
SEMA3B-214ENST00000619119 MAP3K15Q6ZN16 1313 aa18.25■□□□□ 0.51
SEMA3B-214ENST00000619119 BECN2A8MW95 431 aa18.25■□□□□ 0.51
SEMA3B-214ENST00000619119 CCDC158Q5M9N0 1113 aa18.25■□□□□ 0.51
SEMA3B-214ENST00000619119 RASEFQ8IZ41 740 aa18.25■□□□□ 0.51
SEMA3B-214ENST00000619119 BICD2Q8TD16 824 aa18.25■□□□□ 0.51
SEMA3B-214ENST00000619119 MED4Q9NPJ6 270 aa18.25■□□□□ 0.51
SEMA3B-214ENST00000619119 HSPA4P34932 840 aa18.25■□□□□ 0.51
SEMA3B-214ENST00000619119 RUFY3Q7L099 469 aa18.25■□□□□ 0.51
SEMA3B-214ENST00000619119 ATG9AQ7Z3C6 839 aa18.25■□□□□ 0.51
SEMA3B-214ENST00000619119 CLSTN2Q9H4D0 955 aa18.25■□□□□ 0.51
SEMA3B-214ENST00000619119 COL22A1Q8NFW1 1626 aaPredicted RBP18.25■□□□□ 0.51
SEMA3B-214ENST00000619119 CCDC57Q2TAC2 916 aa18.24■□□□□ 0.51
SEMA3B-214ENST00000619119 SPATA31A5Q5VU36 1347 aa18.24■□□□□ 0.51
SEMA3B-214ENST00000619119 SPATA31A7Q8IWB4 1347 aa18.24■□□□□ 0.51
SEMA3B-214ENST00000619119 KCNQ4P56696 695 aa18.24■□□□□ 0.51
SEMA3B-214ENST00000619119 GIGYF2Q6Y7W6 1299 aaKnown RBP18.24■□□□□ 0.51
SEMA3B-214ENST00000619119 DZIP3Q86Y13 1208 aaKnown RBP18.24■□□□□ 0.51
SEMA3B-214ENST00000619119 RUFY2Q8WXA3 655 aa18.24■□□□□ 0.51
SEMA3B-214ENST00000619119 NR1I2O75469 434 aa18.24■□□□□ 0.51
SEMA3B-214ENST00000619119 SMC2O95347 1197 aa18.24■□□□□ 0.51
SEMA3B-214ENST00000619119 DDX46Q7L014 1031 aaKnown RBP18.24■□□□□ 0.51
SEMA3B-214ENST00000619119 A0A0D9SFI3 127 aa18.23■□□□□ 0.51
SEMA3B-214ENST00000619119 FUT8Q9BYC5 575 aa18.23■□□□□ 0.51
SEMA3B-214ENST00000619119 DDX19AQ9NUU7 478 aaKnown RBP18.23■□□□□ 0.51
SEMA3B-214ENST00000619119 LIMCH1Q9UPQ0 1083 aa18.23■□□□□ 0.51
SEMA3B-214ENST00000619119 PLCH1Q4KWH8 1693 aa18.23■□□□□ 0.51
SEMA3B-214ENST00000619119 PRPF40BQ6NWY9 871 aaKnown RBP18.23■□□□□ 0.51
SEMA3B-214ENST00000619119 FAM177A1Q8N128 213 aaPredicted RBP18.23■□□□□ 0.51
SEMA3B-214ENST00000619119 CDCA7Q9BWT1 371 aaPredicted RBP18.23■□□□□ 0.51
SEMA3B-214ENST00000619119 MCM6Q14566 821 aa18.22■□□□□ 0.51
SEMA3B-214ENST00000619119 SNX14Q9Y5W7 946 aa18.22■□□□□ 0.51
SEMA3B-214ENST00000619119 NUP188Q5SRE5 1749 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms