RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 DBNLQ9UJU6 430 aaKnown RBP10.18□□□□□ -0.78
NEK3-209ENST00000618856 TTF2Q9UNY4 1162 aaKnown RBP10.18□□□□□ -0.78
NEK3-209ENST00000618856 PCDHAC2Q9Y5I4 1007 aa10.18□□□□□ -0.78
NEK3-209ENST00000618856 CNTNAP1P78357 1384 aa10.17□□□□□ -0.78
NEK3-209ENST00000618856 ADM5C9JUS6 153 aa10.17□□□□□ -0.78
NEK3-209ENST00000618856 IGSF3O75054 1194 aa10.17□□□□□ -0.78
NEK3-209ENST00000618856 RAB11FIP3O75154 756 aa10.17□□□□□ -0.78
NEK3-209ENST00000618856 CRKP46108 304 aa10.17□□□□□ -0.78
NEK3-209ENST00000618856 CHAF1AQ13111 956 aaPredicted RBP10.17□□□□□ -0.78
NEK3-209ENST00000618856 DLGAP5Q15398 846 aa10.17□□□□□ -0.78
NEK3-209ENST00000618856 APOBEC3HQ6NTF7 200 aaKnown RBP10.17□□□□□ -0.78
NEK3-209ENST00000618856 DLK2Q6UY11 383 aa10.17□□□□□ -0.78
NEK3-209ENST00000618856 RHPN1Q8TCX5 695 aa10.17□□□□□ -0.78
NEK3-209ENST00000618856 FAM163AQ96GL9 167 aaPredicted RBP10.17□□□□□ -0.78
NEK3-209ENST00000618856 ZDHHC15Q96MV8 337 aa10.17□□□□□ -0.78
NEK3-209ENST00000618856 DBNDD2Q9BQY9 259 aa10.17□□□□□ -0.78
NEK3-209ENST00000618856 EXOC6BQ9Y2D4 811 aa10.17□□□□□ -0.78
NEK3-209ENST00000618856 TLL2Q9Y6L7 1015 aa10.17□□□□□ -0.78
NEK3-209ENST00000618856 AKAP11Q9UKA4 1901 aa10.17□□□□□ -0.78
NEK3-209ENST00000618856 MAST3O60307 1309 aa10.16□□□□□ -0.78
NEK3-209ENST00000618856 THSD7BQ9C0I4 1608 aa10.16□□□□□ -0.78
NEK3-209ENST00000618856 F8W031 263 aaPredicted RBP10.16□□□□□ -0.78
NEK3-209ENST00000618856 FRAT2O75474 233 aaPredicted RBP10.16□□□□□ -0.78
NEK3-209ENST00000618856 UQCRFS1P1P0C7P4 283 aa10.16□□□□□ -0.78
NEK3-209ENST00000618856 DSG3P32926 999 aa10.16□□□□□ -0.78
NEK3-209ENST00000618856 MCAMP43121 646 aa10.16□□□□□ -0.78
NEK3-209ENST00000618856 AAMPQ13685 434 aa10.16□□□□□ -0.78
NEK3-209ENST00000618856 SPDYE2Q495Y8 402 aa10.16□□□□□ -0.78
NEK3-209ENST00000618856 FKBP1CQ5VVH2 108 aa10.16□□□□□ -0.78
NEK3-209ENST00000618856 SAPCD2Q86UD0 394 aa10.16□□□□□ -0.78
NEK3-209ENST00000618856 APOBEC3FQ8IUX4 373 aaKnown RBP10.16□□□□□ -0.78
NEK3-209ENST00000618856 SULF1Q8IWU6 871 aa10.16□□□□□ -0.78
NEK3-209ENST00000618856 ZNF384Q8TF68 577 aa10.16□□□□□ -0.78
NEK3-209ENST00000618856 CDCA5Q96FF9 252 aa10.16□□□□□ -0.78
NEK3-209ENST00000618856 NEUROD6Q96NK8 337 aa10.16□□□□□ -0.78
NEK3-209ENST00000618856 DCTPP1Q9H773 170 aa10.16□□□□□ -0.78
NEK3-209ENST00000618856 PCDHB15Q9Y5E8 787 aa10.16□□□□□ -0.78
NEK3-209ENST00000618856 GAKO14976 1311 aa10.15□□□□□ -0.78
NEK3-209ENST00000618856 CELF2O95319 508 aaKnown RBP10.15□□□□□ -0.78
NEK3-209ENST00000618856 PRDX5P30044 214 aa10.15□□□□□ -0.78
NEK3-209ENST00000618856 OS9Q13438 667 aaPredicted RBP10.15□□□□□ -0.78
NEK3-209ENST00000618856 ZGPATQ8N5A5 531 aaKnown RBP10.15□□□□□ -0.78
NEK3-209ENST00000618856 SPATA5Q8NB90 893 aa10.15□□□□□ -0.78
NEK3-209ENST00000618856 TEKT1Q969V4 418 aa10.15□□□□□ -0.78
NEK3-209ENST00000618856 KIF1BPQ96EK5 621 aa10.15□□□□□ -0.78
NEK3-209ENST00000618856 CRBNQ96SW2 442 aa10.15□□□□□ -0.78
NEK3-209ENST00000618856 TLR7Q9NYK1 1049 aaKnown RBP10.15□□□□□ -0.78
NEK3-209ENST00000618856 PPP2R3BQ9Y5P8 575 aa10.15□□□□□ -0.78
NEK3-209ENST00000618856 SSC5DA1L4H1 1573 aa10.14□□□□□ -0.79
NEK3-209ENST00000618856 LDHBP07195 334 aaKnown RBP10.14□□□□□ -0.79
NEK3-209ENST00000618856 FKBP1BP68106 108 aa10.14□□□□□ -0.79
NEK3-209ENST00000618856 CCDC158Q5M9N0 1113 aa10.14□□□□□ -0.79
NEK3-209ENST00000618856 PI16Q6UXB8 463 aa10.14□□□□□ -0.79
NEK3-209ENST00000618856 TEPSINQ96N21 525 aa10.14□□□□□ -0.79
NEK3-209ENST00000618856 DEFB129Q9H1M3 183 aa10.14□□□□□ -0.79
NEK3-209ENST00000618856 ZNF70Q9UC06 446 aaPredicted RBP10.14□□□□□ -0.79
NEK3-209ENST00000618856 PAPPA2Q9BXP8 1791 aa10.14□□□□□ -0.79
NEK3-209ENST00000618856 RFX7Q2KHR2 1363 aa10.14□□□□□ -0.79
NEK3-209ENST00000618856 MYO1BO43795 1136 aa10.13□□□□□ -0.79
NEK3-209ENST00000618856 CYP2E1P05181 493 aaPredicted RBP10.13□□□□□ -0.79
NEK3-209ENST00000618856 HDAC1Q13547 482 aaPredicted RBP10.13□□□□□ -0.79
NEK3-209ENST00000618856 MAP3K11Q16584 847 aa10.13□□□□□ -0.79
NEK3-209ENST00000618856 DEFB115Q30KQ5 88 aa10.13□□□□□ -0.79
NEK3-209ENST00000618856 SPTY2D1Q68D10 685 aaPredicted RBP10.13□□□□□ -0.79
NEK3-209ENST00000618856 FAM83AQ86UY5 434 aa10.13□□□□□ -0.79
NEK3-209ENST00000618856 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.13□□□□□ -0.79
NEK3-209ENST00000618856 NSUN4Q96CB9 384 aaKnown RBP10.13□□□□□ -0.79
NEK3-209ENST00000618856 CCDC8Q9H0W5 538 aaPredicted RBP10.13□□□□□ -0.79
NEK3-209ENST00000618856 TDRD3Q9H7E2 651 aaKnown RBP10.13□□□□□ -0.79
NEK3-209ENST00000618856 IL1RAPL2Q9NP60 686 aa10.13□□□□□ -0.79
NEK3-209ENST00000618856 SCAF8Q9UPN6 1271 aaKnown RBP10.13□□□□□ -0.79
NEK3-209ENST00000618856 DAGLAQ9Y4D2 1042 aa10.13□□□□□ -0.79
NEK3-209ENST00000618856 GPR75-ASB3A0A0A6YYF3 556 aa10.12□□□□□ -0.79
NEK3-209ENST00000618856 CLRN2A0PK11 232 aa10.12□□□□□ -0.79
NEK3-209ENST00000618856 UNCXA6NJT0 531 aa10.12□□□□□ -0.79
NEK3-209ENST00000618856 VEGFBP49765 207 aa10.12□□□□□ -0.79
NEK3-209ENST00000618856 MECOMQ03112 1051 aa10.12□□□□□ -0.79
NEK3-209ENST00000618856 DIXDC1Q155Q3 683 aa10.12□□□□□ -0.79
NEK3-209ENST00000618856 GORABQ5T7V8 394 aa10.12□□□□□ -0.79
NEK3-209ENST00000618856 AACSQ86V21 672 aa10.12□□□□□ -0.79
NEK3-209ENST00000618856 CLASRPQ8N2M8 674 aaKnown RBP10.12□□□□□ -0.79
NEK3-209ENST00000618856 GBA2Q9HCG7 927 aaPredicted RBP10.12□□□□□ -0.79
NEK3-209ENST00000618856 RPAP1Q9BWH6 1393 aaPredicted RBP10.12□□□□□ -0.79
NEK3-209ENST00000618856 MAST2Q6P0Q8 1798 aa10.11□□□□□ -0.79
NEK3-209ENST00000618856 FAM155AB1AL88 458 aaPredicted RBP10.11□□□□□ -0.79
NEK3-209ENST00000618856 MAP4K4O95819 1239 aaPredicted RBP10.11□□□□□ -0.79
NEK3-209ENST00000618856 RBM5P52756 815 aaKnown RBP eCLIP10.11□□□□□ -0.79
NEK3-209ENST00000618856 TNFAIP1Q13829 316 aa10.11□□□□□ -0.79
NEK3-209ENST00000618856 RASA3Q14644 834 aa10.11□□□□□ -0.79
NEK3-209ENST00000618856 TTC39AQ5SRH9 613 aa10.11□□□□□ -0.79
NEK3-209ENST00000618856 LDLRAD1Q5T700 205 aa10.11□□□□□ -0.79
NEK3-209ENST00000618856 PRAMEF18Q5VWM3 479 aa10.11□□□□□ -0.79
NEK3-209ENST00000618856 CDC42EP5Q6NZY7 148 aa10.11□□□□□ -0.79
NEK3-209ENST00000618856 TMED8Q6PL24 325 aaPredicted RBP10.11□□□□□ -0.79
NEK3-209ENST00000618856 TBC1D9Q6ZT07 1266 aa10.11□□□□□ -0.79
NEK3-209ENST00000618856 ERICH6Q7L0X2 663 aa10.11□□□□□ -0.79
NEK3-209ENST00000618856 C2orf69Q8N8R5 385 aa10.11□□□□□ -0.79
NEK3-209ENST00000618856 IDI2Q9BXS1 227 aa10.11□□□□□ -0.79
NEK3-209ENST00000618856 LRRCC1Q9C099 1032 aa10.11□□□□□ -0.79
NEK3-209ENST00000618856 MKRN1Q9UHC7 482 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms