RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 ALDH1L2Q3SY69 923 aa16.24■□□□□ 0.19
PTPN9-206ENST00000618819 RASIP1Q5U651 963 aa16.24■□□□□ 0.19
PTPN9-206ENST00000618819 CNGA4Q8IV77 575 aa16.24■□□□□ 0.19
PTPN9-206ENST00000618819 TRMT112Q9UI30 125 aaKnown RBP16.24■□□□□ 0.19
PTPN9-206ENST00000618819 JARID2Q92833 1246 aaPredicted RBP16.24■□□□□ 0.19
PTPN9-206ENST00000618819 VCX3AQ9NNX9 186 aa16.24■□□□□ 0.19
PTPN9-206ENST00000618819 SBNO2Q9Y2G9 1366 aa16.24■□□□□ 0.19
PTPN9-206ENST00000618819 ACTN4O43707 911 aaKnown RBP16.24■□□□□ 0.19
PTPN9-206ENST00000618819 JPH4Q96JJ6 628 aa16.24■□□□□ 0.19
PTPN9-206ENST00000618819 ERBINQ96RT1 1412 aa16.24■□□□□ 0.19
PTPN9-206ENST00000618819 POLA1P09884 1462 aaPredicted RBP16.24■□□□□ 0.19
PTPN9-206ENST00000618819 ZBTB17Q13105 803 aa16.24■□□□□ 0.19
PTPN9-206ENST00000618819 TRIM6Q9C030 488 aaPredicted RBP16.23■□□□□ 0.19
PTPN9-206ENST00000618819 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.23■□□□□ 0.19
PTPN9-206ENST00000618819 CHST3Q7LGC8 479 aa16.23■□□□□ 0.19
PTPN9-206ENST00000618819 ZBTB21Q9ULJ3 1066 aa16.23■□□□□ 0.19
PTPN9-206ENST00000618819 USHBP1Q8N6Y0 703 aa16.23■□□□□ 0.19
PTPN9-206ENST00000618819 RAB3IPQ96QF0 476 aaPredicted RBP16.23■□□□□ 0.19
PTPN9-206ENST00000618819 VPS16Q9H269 839 aa16.23■□□□□ 0.19
PTPN9-206ENST00000618819 PPME1Q9Y570 386 aa16.23■□□□□ 0.19
PTPN9-206ENST00000618819 SDSP20132 328 aa16.23■□□□□ 0.19
PTPN9-206ENST00000618819 TSPY3P0CV98 308 aa16.23■□□□□ 0.19
PTPN9-206ENST00000618819 TSPY8P0CW00 308 aa16.23■□□□□ 0.19
PTPN9-206ENST00000618819 RPGRQ92834 1020 aaKnown RBP16.23■□□□□ 0.19
PTPN9-206ENST00000618819 BAZ1AQ9NRL2 1556 aaPredicted RBP16.22■□□□□ 0.19
PTPN9-206ENST00000618819 GPTP24298 496 aa16.22■□□□□ 0.19
PTPN9-206ENST00000618819 MAN1A1P33908 653 aa16.22■□□□□ 0.19
PTPN9-206ENST00000618819 NAPAP54920 295 aa16.22■□□□□ 0.19
PTPN9-206ENST00000618819 MYRIPQ8NFW9 859 aa16.22■□□□□ 0.19
PTPN9-206ENST00000618819 MYOM3Q5VTT5 1437 aa16.22■□□□□ 0.19
PTPN9-206ENST00000618819 KRT15P19012 456 aa16.22■□□□□ 0.19
PTPN9-206ENST00000618819 CUL4BQ13620 913 aa16.22■□□□□ 0.19
PTPN9-206ENST00000618819 ANKRD20A3Q5VUR7 823 aa16.22■□□□□ 0.19
PTPN9-206ENST00000618819 IGSF22Q8N9C0 903 aa16.22■□□□□ 0.19
PTPN9-206ENST00000618819 SND1Q7KZF4 910 aaKnown RBP eCLIP16.22■□□□□ 0.19
PTPN9-206ENST00000618819 RBSNQ9H1K0 784 aa16.22■□□□□ 0.19
PTPN9-206ENST00000618819 ANKFY1Q9P2R3 1169 aa16.22■□□□□ 0.19
PTPN9-206ENST00000618819 BMP15O95972 392 aa16.22■□□□□ 0.19
PTPN9-206ENST00000618819 SMARCC2Q8TAQ2 1214 aa16.22■□□□□ 0.19
PTPN9-206ENST00000618819 TSC1Q92574 1164 aa16.22■□□□□ 0.19
PTPN9-206ENST00000618819 RBM8AQ9Y5S9 174 aaKnown RBP16.22■□□□□ 0.19
PTPN9-206ENST00000618819 MRFAP1L1Q96HT8 127 aa16.21■□□□□ 0.19
PTPN9-206ENST00000618819 SPATS2LQ9NUQ6 558 aaKnown RBP16.21■□□□□ 0.19
PTPN9-206ENST00000618819 ASIC3Q9UHC3 531 aa16.21■□□□□ 0.19
PTPN9-206ENST00000618819 GNGT1P63211 74 aa16.21■□□□□ 0.19
PTPN9-206ENST00000618819 TMED1Q13445 227 aa16.21■□□□□ 0.19
PTPN9-206ENST00000618819 DHX29Q7Z478 1369 aaKnown RBP16.21■□□□□ 0.19
PTPN9-206ENST00000618819 RUFY4Q6ZNE9 571 aa16.21■□□□□ 0.19
PTPN9-206ENST00000618819 ZBTB12Q9Y330 459 aaPredicted RBP16.21■□□□□ 0.19
PTPN9-206ENST00000618819 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.21■□□□□ 0.19
PTPN9-206ENST00000618819 GIPC1O14908 333 aa16.21■□□□□ 0.19
PTPN9-206ENST00000618819 WDR46O15213 610 aaKnown RBP16.21■□□□□ 0.19
PTPN9-206ENST00000618819 AFAP1L2Q8N4X5 818 aa16.21■□□□□ 0.19
PTPN9-206ENST00000618819 ZGPATQ8N5A5 531 aaKnown RBP16.21■□□□□ 0.19
PTPN9-206ENST00000618819 MAP3K2Q9Y2U5 619 aa16.21■□□□□ 0.19
PTPN9-206ENST00000618819 CECR2Q9BXF3 1484 aa16.21■□□□□ 0.19
PTPN9-206ENST00000618819 HIP1RO75146 1068 aa16.21■□□□□ 0.18
PTPN9-206ENST00000618819 ZPR1O75312 459 aa16.21■□□□□ 0.18
PTPN9-206ENST00000618819 PDZD8Q8NEN9 1154 aa16.21■□□□□ 0.18
PTPN9-206ENST00000618819 CLTAP09496 248 aa16.2■□□□□ 0.18
PTPN9-206ENST00000618819 LRPPRCP42704 1394 aaKnown RBP16.2■□□□□ 0.18
PTPN9-206ENST00000618819 NOC4LQ9BVI4 516 aaKnown RBP16.2■□□□□ 0.18
PTPN9-206ENST00000618819 ZNF652Q9Y2D9 606 aa16.2■□□□□ 0.18
PTPN9-206ENST00000618819 RBBP5Q15291 538 aaKnown RBP16.2■□□□□ 0.18
PTPN9-206ENST00000618819 HVCN1Q96D96 273 aa16.2■□□□□ 0.18
PTPN9-206ENST00000618819 A0A1B0GVL5 298 aa16.2■□□□□ 0.18
PTPN9-206ENST00000618819 STAC3Q96MF2 364 aa16.2■□□□□ 0.18
PTPN9-206ENST00000618819 NSD3Q9BZ95 1437 aa16.2■□□□□ 0.18
PTPN9-206ENST00000618819 TRIM75PA6NK02 468 aa16.2■□□□□ 0.18
PTPN9-206ENST00000618819 ATP1A2P50993 1020 aa16.2■□□□□ 0.18
PTPN9-206ENST00000618819 SLF2Q8IX21 1173 aa16.2■□□□□ 0.18
PTPN9-206ENST00000618819 CSRNP2Q9H175 543 aa16.2■□□□□ 0.18
PTPN9-206ENST00000618819 CABP5Q9NP86 173 aa16.2■□□□□ 0.18
PTPN9-206ENST00000618819 PPP1R9AQ9ULJ8 1098 aa16.2■□□□□ 0.18
PTPN9-206ENST00000618819 RLBP1P12271 317 aa16.19■□□□□ 0.18
PTPN9-206ENST00000618819 SPDL1Q96EA4 605 aa16.19■□□□□ 0.18
PTPN9-206ENST00000618819 BEND3Q5T5X7 828 aa16.19■□□□□ 0.18
PTPN9-206ENST00000618819 TTC19Q6DKK2 380 aaPredicted RBP16.19■□□□□ 0.18
PTPN9-206ENST00000618819 PHLDB3Q6NSJ2 640 aa16.19■□□□□ 0.18
PTPN9-206ENST00000618819 GUCY2FP51841 1108 aa16.19■□□□□ 0.18
PTPN9-206ENST00000618819 MSANTD4Q8NCY6 345 aa16.19■□□□□ 0.18
PTPN9-206ENST00000618819 CYP26C1Q6V0L0 522 aa16.19■□□□□ 0.18
PTPN9-206ENST00000618819 PPP1R42Q7Z4L9 355 aa16.19■□□□□ 0.18
PTPN9-206ENST00000618819 PROSER2Q86WR7 435 aaPredicted RBP16.19■□□□□ 0.18
PTPN9-206ENST00000618819 ZNF692Q9BU19 519 aaPredicted RBP16.19■□□□□ 0.18
PTPN9-206ENST00000618819 RAB3GAP1Q15042 981 aa16.19■□□□□ 0.18
PTPN9-206ENST00000618819 DBN1Q16643 649 aa16.19■□□□□ 0.18
PTPN9-206ENST00000618819 LRRD1A4D1F6 860 aa16.19■□□□□ 0.18
PTPN9-206ENST00000618819 CEP104O60308 925 aa16.19■□□□□ 0.18
PTPN9-206ENST00000618819 PRPF31Q8WWY3 499 aaKnown RBP16.19■□□□□ 0.18
PTPN9-206ENST00000618819 ANKRD50Q9ULJ7 1429 aa16.19■□□□□ 0.18
PTPN9-206ENST00000618819 TBC1D8O95759 1140 aa16.18■□□□□ 0.18
PTPN9-206ENST00000618819 TNFAIP3P21580 790 aa16.18■□□□□ 0.18
PTPN9-206ENST00000618819 FGD6Q6ZV73 1430 aa16.18■□□□□ 0.18
PTPN9-206ENST00000618819 CASC4Q6P4E1 433 aa16.18■□□□□ 0.18
PTPN9-206ENST00000618819 ZC4H2Q9NQZ6 224 aa16.18■□□□□ 0.18
PTPN9-206ENST00000618819 ATP5J2-PTCD1G3V325 749 aa16.18■□□□□ 0.18
PTPN9-206ENST00000618819 MYL5Q02045 173 aa16.18■□□□□ 0.18
PTPN9-206ENST00000618819 KRT71Q3SY84 523 aa16.18■□□□□ 0.18
PTPN9-206ENST00000618819 ZBTB3Q9H5J0 574 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 278.5 ms