RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 TTC6Q86TZ1 520 aa16.01■□□□□ 0.15
CIITA-213ENST00000618327 RXRBP28702 533 aa16.01■□□□□ 0.15
CIITA-213ENST00000618327 NLGN1Q8N2Q7 840 aa16.01■□□□□ 0.15
CIITA-213ENST00000618327 SASH1O94885 1247 aa16■□□□□ 0.15
CIITA-213ENST00000618327 SEC31BQ9NQW1 1179 aa16■□□□□ 0.15
CIITA-213ENST00000618327 JCADQ9P266 1359 aa16■□□□□ 0.15
CIITA-213ENST00000618327 OVOS2A0A0G2JMS6 1433 aa16■□□□□ 0.15
CIITA-213ENST00000618327 MTX1Q13505 466 aa16■□□□□ 0.15
CIITA-213ENST00000618327 ANGEL1Q9UNK9 670 aaKnown RBP16■□□□□ 0.15
CIITA-213ENST00000618327 PHKA1P46020 1223 aa16■□□□□ 0.15
CIITA-213ENST00000618327 TMEM266Q2M3C6 531 aa16■□□□□ 0.15
CIITA-213ENST00000618327 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16■□□□□ 0.15
CIITA-213ENST00000618327 PDE6BP35913 854 aa16■□□□□ 0.15
CIITA-213ENST00000618327 ERFEQ4G0M1 354 aa16■□□□□ 0.15
CIITA-213ENST00000618327 EPHA10Q5JZY3 1008 aa16■□□□□ 0.15
CIITA-213ENST00000618327 MSL1Q68DK7 614 aa16■□□□□ 0.15
CIITA-213ENST00000618327 CBFA2T2O43439 604 aa15.99■□□□□ 0.15
CIITA-213ENST00000618327 OFD1O75665 1012 aa15.99■□□□□ 0.15
CIITA-213ENST00000618327 CYP19A1P11511 503 aaPredicted RBP15.99■□□□□ 0.15
CIITA-213ENST00000618327 PDE6AP16499 860 aa15.99■□□□□ 0.15
CIITA-213ENST00000618327 CCDC148Q8NFR7 591 aa15.99■□□□□ 0.15
CIITA-213ENST00000618327 KCNG4Q8TDN1 519 aa15.99■□□□□ 0.15
CIITA-213ENST00000618327 UBE4AQ14139 1066 aa15.99■□□□□ 0.15
CIITA-213ENST00000618327 RUFY1Q96T51 708 aa15.99■□□□□ 0.15
CIITA-213ENST00000618327 VEZTQ9HBM0 779 aa15.99■□□□□ 0.15
CIITA-213ENST00000618327 PALD1Q9ULE6 856 aa15.99■□□□□ 0.15
CIITA-213ENST00000618327 SUSD4Q5VX71 490 aa15.99■□□□□ 0.15
CIITA-213ENST00000618327 SAP30BPQ9UHR5 308 aaKnown RBP15.99■□□□□ 0.15
CIITA-213ENST00000618327 CLEC4GQ6UXB4 293 aa15.98■□□□□ 0.15
CIITA-213ENST00000618327 CERS3Q8IU89 383 aa15.98■□□□□ 0.15
CIITA-213ENST00000618327 SMARCE1Q969G3 411 aa15.98■□□□□ 0.15
CIITA-213ENST00000618327 RBM10P98175 930 aaKnown RBP15.98■□□□□ 0.15
CIITA-213ENST00000618327 TTLL11Q8NHH1 800 aa15.98■□□□□ 0.15
CIITA-213ENST00000618327 ADCY9O60503 1353 aa15.98■□□□□ 0.15
CIITA-213ENST00000618327 PRDM1O75626 825 aa15.98■□□□□ 0.15
CIITA-213ENST00000618327 DHX8Q14562 1220 aaKnown RBP15.98■□□□□ 0.15
CIITA-213ENST00000618327 HEATR3Q7Z4Q2 680 aa15.98■□□□□ 0.15
CIITA-213ENST00000618327 TBC1D22AQ8WUA7 517 aa15.98■□□□□ 0.15
CIITA-213ENST00000618327 MST1RQ04912 1400 aa15.98■□□□□ 0.15
CIITA-213ENST00000618327 NBPF26B4DH59 902 aa15.98■□□□□ 0.15
CIITA-213ENST00000618327 E7EWF7 191 aa15.98■□□□□ 0.15
CIITA-213ENST00000618327 NBPF10Q6P3W6 841 aaKnown RBP15.98■□□□□ 0.15
CIITA-213ENST00000618327 NBPF15Q8N660 670 aa15.98■□□□□ 0.15
CIITA-213ENST00000618327 PANK2Q9BZ23 570 aa15.98■□□□□ 0.15
CIITA-213ENST00000618327 MAST3O60307 1309 aa15.97■□□□□ 0.15
CIITA-213ENST00000618327 SRP68Q9UHB9 627 aaKnown RBP15.97■□□□□ 0.15
CIITA-213ENST00000618327 RPS6KA4O75676 772 aa15.97■□□□□ 0.15
CIITA-213ENST00000618327 HSPD1P10809 573 aaKnown RBP15.97■□□□□ 0.15
CIITA-213ENST00000618327 CALRP27797 417 aaKnown RBP15.97■□□□□ 0.15
CIITA-213ENST00000618327 TTLL12Q14166 644 aaPredicted RBP15.97■□□□□ 0.15
CIITA-213ENST00000618327 PRM3Q9NNZ6 103 aa15.97■□□□□ 0.15
CIITA-213ENST00000618327 CTDSPL2Q05D32 466 aa15.97■□□□□ 0.15
CIITA-213ENST00000618327 TCP11L1Q9NUJ3 509 aa15.97■□□□□ 0.15
CIITA-213ENST00000618327 CWC15Q9P013 229 aaKnown RBP15.97■□□□□ 0.15
CIITA-213ENST00000618327 BMP15O95972 392 aa15.97■□□□□ 0.15
CIITA-213ENST00000618327 CDR1P51861 262 aa15.97■□□□□ 0.15
CIITA-213ENST00000618327 ZSCAN23Q3MJ62 389 aa15.97■□□□□ 0.15
CIITA-213ENST00000618327 PPFIBP1Q86W92 1011 aa15.97■□□□□ 0.15
CIITA-213ENST00000618327 LLPHQ9BRT6 129 aaKnown RBP15.97■□□□□ 0.15
CIITA-213ENST00000618327 KDM4FA0A1W2PPD8 638 aa15.96■□□□□ 0.15
CIITA-213ENST00000618327 ATP2B4P23634 1241 aa15.96■□□□□ 0.15
CIITA-213ENST00000618327 NCOA5Q9HCD5 579 aaKnown RBP15.96■□□□□ 0.15
CIITA-213ENST00000618327 CEMIPQ8WUJ3 1361 aa15.96■□□□□ 0.15
CIITA-213ENST00000618327 SERPINB2P05120 415 aa15.96■□□□□ 0.15
CIITA-213ENST00000618327 TNIP1Q15025 636 aa15.96■□□□□ 0.15
CIITA-213ENST00000618327 FILIP1Q7Z7B0 1213 aa15.96■□□□□ 0.15
CIITA-213ENST00000618327 CERKQ8TCT0 537 aa15.96■□□□□ 0.15
CIITA-213ENST00000618327 KCNQ2O43526 872 aa15.96■□□□□ 0.15
CIITA-213ENST00000618327 UBA7P41226 1012 aa15.96■□□□□ 0.15
CIITA-213ENST00000618327 LSG1Q9H089 658 aaKnown RBP15.96■□□□□ 0.15
CIITA-213ENST00000618327 ZNF804BA4D1E1 1349 aa15.96■□□□□ 0.14
CIITA-213ENST00000618327 KLHL10Q6JEL2 608 aa15.95■□□□□ 0.14
CIITA-213ENST00000618327 RBM28Q9NW13 759 aaKnown RBP15.95■□□□□ 0.14
CIITA-213ENST00000618327 NAPAP54920 295 aa15.95■□□□□ 0.14
CIITA-213ENST00000618327 UBE3CQ15386 1083 aa15.95■□□□□ 0.14
CIITA-213ENST00000618327 RBM26Q5T8P6 1007 aaKnown RBP15.95■□□□□ 0.14
CIITA-213ENST00000618327 GJD4Q96KN9 370 aaPredicted RBP15.95■□□□□ 0.14
CIITA-213ENST00000618327 SIGLEC1Q9BZZ2 1709 aa15.95■□□□□ 0.14
CIITA-213ENST00000618327 MAP2P11137 1827 aaKnown RBP15.95■□□□□ 0.14
CIITA-213ENST00000618327 CALML3P27482 149 aa15.95■□□□□ 0.14
CIITA-213ENST00000618327 NAP1L1P55209 391 aaKnown RBP15.95■□□□□ 0.14
CIITA-213ENST00000618327 MFSD14BQ5SR56 506 aa15.95■□□□□ 0.14
CIITA-213ENST00000618327 MAP4K1Q92918 833 aa15.95■□□□□ 0.14
CIITA-213ENST00000618327 EHMT1Q9H9B1 1298 aa15.95■□□□□ 0.14
CIITA-213ENST00000618327 MYO5BQ9ULV0 1848 aa15.95■□□□□ 0.14
CIITA-213ENST00000618327 SYKP43405 635 aa15.94■□□□□ 0.14
CIITA-213ENST00000618327 CFAP100Q494V2 611 aa15.94■□□□□ 0.14
CIITA-213ENST00000618327 GIMAP6Q6P9H5 292 aa15.94■□□□□ 0.14
CIITA-213ENST00000618327 BRAPQ7Z569 592 aa15.94■□□□□ 0.14
CIITA-213ENST00000618327 PI4K2BQ8TCG2 481 aa15.94■□□□□ 0.14
CIITA-213ENST00000618327 MRPS27Q92552 414 aaKnown RBP15.94■□□□□ 0.14
CIITA-213ENST00000618327 TANGO6Q9C0B7 1094 aa15.94■□□□□ 0.14
CIITA-213ENST00000618327 CPDO75976 1380 aa15.94■□□□□ 0.14
CIITA-213ENST00000618327 H0YHG0 523 aa15.94■□□□□ 0.14
CIITA-213ENST00000618327 BIN1O00499 593 aa15.94■□□□□ 0.14
CIITA-213ENST00000618327 MARCKSP29966 332 aaPredicted RBP15.94■□□□□ 0.14
CIITA-213ENST00000618327 AKNAD1Q5T1N1 836 aa15.94■□□□□ 0.14
CIITA-213ENST00000618327 TTLL5Q6EMB2 1281 aa15.94■□□□□ 0.14
CIITA-213ENST00000618327 SUPT20HQ8NEM7 779 aa15.94■□□□□ 0.14
CIITA-213ENST00000618327 COL3A1P02461 1466 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms