RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 KLHL40Q2TBA0 621 aa12.55□□□□□ -0.4
CCDC144B-208ENST00000618081 ALDH1L1O75891 902 aa12.55□□□□□ -0.4
CCDC144B-208ENST00000618081 IL2RBP14784 551 aa12.55□□□□□ -0.4
CCDC144B-208ENST00000618081 SKILP12757 684 aa12.55□□□□□ -0.4
CCDC144B-208ENST00000618081 VAV2P52735 878 aa12.55□□□□□ -0.4
CCDC144B-208ENST00000618081 COPS6Q7L5N1 327 aa12.55□□□□□ -0.4
CCDC144B-208ENST00000618081 KRT222Q8N1A0 295 aa12.55□□□□□ -0.4
CCDC144B-208ENST00000618081 NOP56O00567 594 aaKnown RBP12.55□□□□□ -0.4
CCDC144B-208ENST00000618081 RAB3GAP1Q15042 981 aa12.55□□□□□ -0.4
CCDC144B-208ENST00000618081 AKNAD1Q5T1N1 836 aa12.55□□□□□ -0.4
CCDC144B-208ENST00000618081 KSR2Q6VAB6 950 aa12.55□□□□□ -0.4
CCDC144B-208ENST00000618081 CCDC121Q6ZUS5 278 aa12.55□□□□□ -0.4
CCDC144B-208ENST00000618081 CCDC25Q86WR0 208 aa12.55□□□□□ -0.4
CCDC144B-208ENST00000618081 ATRIPQ8WXE1 791 aa12.55□□□□□ -0.4
CCDC144B-208ENST00000618081 RNF34Q969K3 372 aa12.55□□□□□ -0.4
CCDC144B-208ENST00000618081 ADGBQ8N7X0 1667 aa12.54□□□□□ -0.4
CCDC144B-208ENST00000618081 CALCOCO2Q13137 446 aa12.54□□□□□ -0.4
CCDC144B-208ENST00000618081 IDI1Q13907 227 aa12.54□□□□□ -0.4
CCDC144B-208ENST00000618081 RBM26Q5T8P6 1007 aaKnown RBP12.54□□□□□ -0.4
CCDC144B-208ENST00000618081 CCDC26Q8TAB7 109 aa12.54□□□□□ -0.4
CCDC144B-208ENST00000618081 EPSTI1Q96J88 318 aa12.54□□□□□ -0.4
CCDC144B-208ENST00000618081 PLB1Q6P1J6 1458 aa12.54□□□□□ -0.4
CCDC144B-208ENST00000618081 DKC1O60832 514 aaKnown RBP eCLIP12.54□□□□□ -0.4
CCDC144B-208ENST00000618081 HCLS1P14317 486 aaPredicted RBP12.54□□□□□ -0.4
CCDC144B-208ENST00000618081 SETDB1Q15047 1291 aa12.54□□□□□ -0.4
CCDC144B-208ENST00000618081 VPS52Q8N1B4 723 aa12.54□□□□□ -0.4
CCDC144B-208ENST00000618081 THOC2Q8NI27 1593 aaKnown RBP12.54□□□□□ -0.4
CCDC144B-208ENST00000618081 BEGAINQ9BUH8 593 aa12.54□□□□□ -0.4
CCDC144B-208ENST00000618081 STRN3Q13033 797 aa12.54□□□□□ -0.4
CCDC144B-208ENST00000618081 CACYBPQ9HB71 228 aaKnown RBP12.54□□□□□ -0.4
CCDC144B-208ENST00000618081 TNNC1P63316 161 aa12.54□□□□□ -0.4
CCDC144B-208ENST00000618081 TMX3Q96JJ7 454 aa12.54□□□□□ -0.4
CCDC144B-208ENST00000618081 MAP3K1Q13233 1512 aa12.54□□□□□ -0.4
CCDC144B-208ENST00000618081 NACA2Q9H009 215 aa12.54□□□□□ -0.4
CCDC144B-208ENST00000618081 ATP2C2O75185 946 aa12.54□□□□□ -0.4
CCDC144B-208ENST00000618081 VWA3BQ502W6 1294 aa12.54□□□□□ -0.4
CCDC144B-208ENST00000618081 CCDC125Q86Z20 511 aa12.54□□□□□ -0.4
CCDC144B-208ENST00000618081 AOPEPQ8N6M6 819 aa12.54□□□□□ -0.4
CCDC144B-208ENST00000618081 LRRC2Q9BYS8 371 aa12.54□□□□□ -0.4
CCDC144B-208ENST00000618081 NSFL1CQ9UNZ2 370 aaKnown RBP12.54□□□□□ -0.4
CCDC144B-208ENST00000618081 UHRF1BP1LA0JNW5 1464 aa12.54□□□□□ -0.4
CCDC144B-208ENST00000618081 RASA3Q14644 834 aa12.54□□□□□ -0.4
CCDC144B-208ENST00000618081 HSP90AA4PQ58FG1 418 aa12.54□□□□□ -0.4
CCDC144B-208ENST00000618081 FAM200AQ8TCP9 573 aa12.54□□□□□ -0.4
CCDC144B-208ENST00000618081 DAPK3O43293 454 aa12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 SDSP20132 328 aa12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 BIRC2Q13490 618 aa12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 GSDMBQ8TAX9 411 aa12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 JARID2Q92833 1246 aaPredicted RBP12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 GABPAQ06546 454 aa12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 HDAC1Q13547 482 aaPredicted RBP12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 SV2BQ7L1I2 683 aa12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 IQUBQ8NA54 791 aa12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 RNF216Q9NWF9 866 aaPredicted RBP12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 CNPY2Q9Y2B0 182 aa12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 TUBBP07437 444 aa12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 NECAB1Q8N987 351 aa12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 SAMD15Q9P1V8 674 aa12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 CALUO43852 315 aaPredicted RBP12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 PPFIA3O75145 1194 aa12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 TERF1P54274 439 aa12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 TRPC3Q13507 836 aa12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 HAUS3Q68CZ6 603 aa12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 SRGAP1Q7Z6B7 1085 aa12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 CPLX4Q7Z7G2 160 aa12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 PROCA1Q8NCQ7 364 aaPredicted RBP12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 EXOC7Q9UPT5 735 aa12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 NOC2LQ9Y3T9 749 aaKnown RBP12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 FAM83GA6ND36 823 aa12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 GPATCH11Q8N954 259 aa12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 IPO4Q8TEX9 1081 aaKnown RBP12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 BIRC3Q13489 604 aa12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 CNNM4Q6P4Q7 775 aa12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 TTC6Q86TZ1 520 aa12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 CNGA4Q8IV77 575 aa12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 PRDM10Q9NQV6 1147 aa12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 DNAI1Q9UI46 699 aa12.53□□□□□ -0.4
CCDC144B-208ENST00000618081 PCDH11XQ9BZA7 1347 aa12.52□□□□□ -0.4
CCDC144B-208ENST00000618081 PCDH11YQ9BZA8 1340 aa12.52□□□□□ -0.4
CCDC144B-208ENST00000618081 BIVM-ERCC5R4GMW8 1640 aa12.52□□□□□ -0.4
CCDC144B-208ENST00000618081 SP4Q02446 784 aa12.52□□□□□ -0.4
CCDC144B-208ENST00000618081 ATL3Q6DD88 541 aa12.52□□□□□ -0.4
CCDC144B-208ENST00000618081 UBL4BQ8N7F7 174 aa12.52□□□□□ -0.4
CCDC144B-208ENST00000618081 ESYT1Q9BSJ8 1104 aa12.52□□□□□ -0.4
CCDC144B-208ENST00000618081 IVNS1ABPQ9Y6Y0 642 aa12.52□□□□□ -0.4
CCDC144B-208ENST00000618081 ERCC5P28715 1186 aaPredicted RBP12.52□□□□□ -0.4
CCDC144B-208ENST00000618081 MAPK8IP2Q13387 824 aaPredicted RBP12.52□□□□□ -0.4
CCDC144B-208ENST00000618081 CLUL1Q15846 466 aa12.52□□□□□ -0.4
CCDC144B-208ENST00000618081 C20orf194Q5TEA3 1177 aa12.52□□□□□ -0.4
CCDC144B-208ENST00000618081 LIN9Q5TKA1 542 aa12.52□□□□□ -0.4
CCDC144B-208ENST00000618081 ITIH3Q06033 890 aa12.52□□□□□ -0.41
CCDC144B-208ENST00000618081 CUL4BQ13620 913 aa12.52□□□□□ -0.41
CCDC144B-208ENST00000618081 SEC62Q99442 399 aaKnown RBP12.52□□□□□ -0.41
CCDC144B-208ENST00000618081 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.52□□□□□ -0.41
CCDC144B-208ENST00000618081 MAST3O60307 1309 aa12.52□□□□□ -0.41
CCDC144B-208ENST00000618081 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.52□□□□□ -0.41
CCDC144B-208ENST00000618081 HMGB1P1B2RPK0 211 aaPredicted RBP12.52□□□□□ -0.41
CCDC144B-208ENST00000618081 FAM204AQ9H8W3 233 aa12.52□□□□□ -0.41
CCDC144B-208ENST00000618081 KCNK9Q9NPC2 374 aa12.52□□□□□ -0.41
CCDC144B-208ENST00000618081 PPANQ9NQ55 473 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms