RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 GTF3C6Q969F1 213 aa12.56□□□□□ -0.4
POLR2A-209ENST00000617998 ANKRD62A6NC57 917 aa12.56□□□□□ -0.4
POLR2A-209ENST00000617998 ECE2O60344 883 aa12.56□□□□□ -0.4
POLR2A-209ENST00000617998 USH1GQ495M9 461 aa12.56□□□□□ -0.4
POLR2A-209ENST00000617998 IDEP14735 1019 aa12.56□□□□□ -0.4
POLR2A-209ENST00000617998 METAP2P50579 478 aaKnown RBP eCLIP12.56□□□□□ -0.42e-6■■■□□ 16.3
POLR2A-209ENST00000617998 DPH6Q7L8W6 267 aa12.56□□□□□ -0.4
POLR2A-209ENST00000617998 CCAR2Q8N163 923 aaKnown RBP12.56□□□□□ -0.4
POLR2A-209ENST00000617998 METTL13Q8N6R0 699 aa12.56□□□□□ -0.4
POLR2A-209ENST00000617998 ZBTB38Q8NAP3 1195 aaPredicted RBP12.56□□□□□ -0.4
POLR2A-209ENST00000617998 WRNIP1Q96S55 665 aa12.56□□□□□ -0.4
POLR2A-209ENST00000617998 PA2G4Q9UQ80 394 aaKnown RBP12.56□□□□□ -0.4
POLR2A-209ENST00000617998 TTLL7Q6ZT98 887 aa12.55□□□□□ -0.4
POLR2A-209ENST00000617998 CHD1LQ86WJ1 897 aa12.55□□□□□ -0.4
POLR2A-209ENST00000617998 ADD3Q9UEY8 706 aaKnown RBP12.55□□□□□ -0.4
POLR2A-209ENST00000617998 SOS1Q07889 1333 aaPredicted RBP12.55□□□□□ -0.4
POLR2A-209ENST00000617998 SOCS7O14512 581 aa12.55□□□□□ -0.4
POLR2A-209ENST00000617998 KCNJ6P48051 423 aa12.55□□□□□ -0.4
POLR2A-209ENST00000617998 ARID5AQ03989 594 aa12.55□□□□□ -0.4
POLR2A-209ENST00000617998 ABCB5Q2M3G0 1257 aa12.55□□□□□ -0.4
POLR2A-209ENST00000617998 MICALL2Q8IY33 904 aa12.55□□□□□ -0.4
POLR2A-209ENST00000617998 PDILTQ8N807 584 aa12.55□□□□□ -0.4
POLR2A-209ENST00000617998 HINFPQ9BQA5 517 aa12.55□□□□□ -0.4
POLR2A-209ENST00000617998 LUC7LQ9NQ29 371 aaKnown RBP12.55□□□□□ -0.4
POLR2A-209ENST00000617998 ZNHIT6Q9NWK9 470 aaKnown RBP12.55□□□□□ -0.4
POLR2A-209ENST00000617998 DACH1Q9UI36 760 aa12.55□□□□□ -0.4
POLR2A-209ENST00000617998 RBM19Q9Y4C8 960 aaKnown RBP12.55□□□□□ -0.4
POLR2A-209ENST00000617998 CASTP20810 708 aaKnown RBP12.55□□□□□ -0.4
POLR2A-209ENST00000617998 MSNP26038 577 aaKnown RBP12.55□□□□□ -0.4
POLR2A-209ENST00000617998 SYNCQ9H7C4 482 aa12.55□□□□□ -0.4
POLR2A-209ENST00000617998 USP16Q9Y5T5 823 aa12.55□□□□□ -0.4
POLR2A-209ENST00000617998 CFBP00751 764 aa12.55□□□□□ -0.4
POLR2A-209ENST00000617998 CETN2P41208 172 aa12.55□□□□□ -0.4
POLR2A-209ENST00000617998 CFAP100Q494V2 611 aa12.55□□□□□ -0.4
POLR2A-209ENST00000617998 COA1Q9GZY4 146 aa12.55□□□□□ -0.4
POLR2A-209ENST00000617998 HOXB7P09629 217 aa12.55□□□□□ -0.4
POLR2A-209ENST00000617998 TGFB2P61812 414 aa12.55□□□□□ -0.4
POLR2A-209ENST00000617998 SLC26A6Q9BXS9 759 aa12.55□□□□□ -0.4
POLR2A-209ENST00000617998 ZNRF3Q9ULT6 936 aa12.55□□□□□ -0.4
POLR2A-209ENST00000617998 BTDP43251 543 aa12.54□□□□□ -0.4
POLR2A-209ENST00000617998 GYG1P46976 350 aa12.54□□□□□ -0.4
POLR2A-209ENST00000617998 CLEC4GQ6UXB4 293 aa12.54□□□□□ -0.4
POLR2A-209ENST00000617998 COMMD10Q9Y6G5 202 aa12.54□□□□□ -0.4
POLR2A-209ENST00000617998 AMPD3Q01432 767 aa12.54□□□□□ -0.4
POLR2A-209ENST00000617998 MAP3K11Q16584 847 aa12.54□□□□□ -0.4
POLR2A-209ENST00000617998 INSRP06213 1382 aa12.54□□□□□ -0.4
POLR2A-209ENST00000617998 EPHX2P34913 555 aa12.54□□□□□ -0.4
POLR2A-209ENST00000617998 FASTKD5Q7L8L6 764 aaKnown RBP12.54□□□□□ -0.4
POLR2A-209ENST00000617998 DEF6Q9H4E7 631 aa12.54□□□□□ -0.4
POLR2A-209ENST00000617998 ANAPC15P60006 121 aa12.54□□□□□ -0.4
POLR2A-209ENST00000617998 CHRNDQ07001 517 aa12.54□□□□□ -0.4
POLR2A-209ENST00000617998 ZSCAN31Q96LW9 406 aaPredicted RBP12.54□□□□□ -0.4
POLR2A-209ENST00000617998 A0A1B0GUL7 405 aa12.54□□□□□ -0.4
POLR2A-209ENST00000617998 MCM5P33992 734 aa12.54□□□□□ -0.4
POLR2A-209ENST00000617998 LARP1BQ659C4 914 aaKnown RBP12.54□□□□□ -0.4
POLR2A-209ENST00000617998 HARSP12081 509 aaKnown RBP12.54□□□□□ -0.4
POLR2A-209ENST00000617998 RNASELQ05823 741 aaKnown RBP12.54□□□□□ -0.4
POLR2A-209ENST00000617998 LRRC27Q9C0I9 530 aa12.54□□□□□ -0.4
POLR2A-209ENST00000617998 UTP14CQ5TAP6 766 aaKnown RBP12.53□□□□□ -0.4
POLR2A-209ENST00000617998 CDAN1Q8IWY9 1227 aa12.53□□□□□ -0.4
POLR2A-209ENST00000617998 C8orf76Q96K31 380 aa12.53□□□□□ -0.4
POLR2A-209ENST00000617998 SPATA32Q96LK8 384 aa12.53□□□□□ -0.4
POLR2A-209ENST00000617998 ERBB4Q15303 1308 aa12.53□□□□□ -0.4
POLR2A-209ENST00000617998 SASH1O94885 1247 aa12.53□□□□□ -0.4
POLR2A-209ENST00000617998 MYL3P08590 195 aa12.53□□□□□ -0.4
POLR2A-209ENST00000617998 ICA1Q05084 483 aa12.53□□□□□ -0.4
POLR2A-209ENST00000617998 NOM1Q5C9Z4 860 aaKnown RBP12.53□□□□□ -0.4
POLR2A-209ENST00000617998 TNS4Q8IZW8 715 aa12.53□□□□□ -0.4
POLR2A-209ENST00000617998 RHPN1Q8TCX5 695 aa12.53□□□□□ -0.4
POLR2A-209ENST00000617998 CLIP2Q9UDT6 1046 aa12.53□□□□□ -0.4
POLR2A-209ENST00000617998 STK24Q9Y6E0 443 aa12.53□□□□□ -0.4
POLR2A-209ENST00000617998 POTEB2H3BUK9 544 aa12.53□□□□□ -0.4
POLR2A-209ENST00000617998 GNA11P29992 359 aa12.53□□□□□ -0.4
POLR2A-209ENST00000617998 UBA7P41226 1012 aa12.53□□□□□ -0.4
POLR2A-209ENST00000617998 RTN1Q16799 776 aa12.53□□□□□ -0.4
POLR2A-209ENST00000617998 XAGE2Q96GT9 111 aa12.53□□□□□ -0.4
POLR2A-209ENST00000617998 IL16Q14005 1332 aa12.53□□□□□ -0.4
POLR2A-209ENST00000617998 RTL9Q8NET4 1388 aa12.52□□□□□ -0.4
POLR2A-209ENST00000617998 TESPA1A2RU30 521 aaPredicted RBP12.52□□□□□ -0.4
POLR2A-209ENST00000617998 RGS22Q8NE09 1264 aa12.52□□□□□ -0.4
POLR2A-209ENST00000617998 IFT74Q96LB3 600 aa12.52□□□□□ -0.4
POLR2A-209ENST00000617998 EIF2AK4Q9P2K8 1649 aaKnown RBP12.52□□□□□ -0.4
POLR2A-209ENST00000617998 TMOD1P28289 359 aa12.52□□□□□ -0.41
POLR2A-209ENST00000617998 SPATA5Q8NB90 893 aa12.52□□□□□ -0.41
POLR2A-209ENST00000617998 RNF216Q9NWF9 866 aaPredicted RBP12.52□□□□□ -0.41
POLR2A-209ENST00000617998 SLC8A3P57103 927 aa12.52□□□□□ -0.41
POLR2A-209ENST00000617998 TCERG1LQ5VWI1 586 aa12.52□□□□□ -0.41
POLR2A-209ENST00000617998 MCF2L2Q86YR7 1114 aa12.52□□□□□ -0.41
POLR2A-209ENST00000617998 RTN4Q9NQC3 1192 aaKnown RBP12.52□□□□□ -0.41
POLR2A-209ENST00000617998 RNF113AO15541 343 aaKnown RBP12.52□□□□□ -0.41
POLR2A-209ENST00000617998 USP8P40818 1118 aa12.52□□□□□ -0.41
POLR2A-209ENST00000617998 ZHX2Q9Y6X8 837 aa12.52□□□□□ -0.41
POLR2A-209ENST00000617998 PTPRTO14522 1441 aa12.52□□□□□ -0.41
POLR2A-209ENST00000617998 RAB11FIP4Q86YS3 637 aa12.51□□□□□ -0.41
POLR2A-209ENST00000617998 C8orf58Q8NAV2 365 aa12.51□□□□□ -0.41
POLR2A-209ENST00000617998 SMARCE1Q969G3 411 aa12.51□□□□□ -0.41
POLR2A-209ENST00000617998 CCDC102AQ96A19 550 aa12.51□□□□□ -0.41
POLR2A-209ENST00000617998 SBNO2Q9Y2G9 1366 aa12.51□□□□□ -0.41
POLR2A-209ENST00000617998 ZSCAN20P17040 1043 aaPredicted RBP12.51□□□□□ -0.41
POLR2A-209ENST00000617998 MARCKSP29966 332 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms