RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 PPFIA3O75145 1194 aa8.36□□□□□ -1.07
PDE6A-205ENST00000617647 HMOX1P09601 288 aa8.36□□□□□ -1.07
PDE6A-205ENST00000617647 ADKP55263 362 aaKnown RBP8.36□□□□□ -1.07
PDE6A-205ENST00000617647 LARP1Q6PKG0 1096 aaKnown RBP8.36□□□□□ -1.07
PDE6A-205ENST00000617647 JADE2Q9NQC1 790 aa8.36□□□□□ -1.07
PDE6A-205ENST00000617647 SURF6O75683 361 aaKnown RBP8.36□□□□□ -1.07
PDE6A-205ENST00000617647 PDHBP11177 359 aa8.36□□□□□ -1.07
PDE6A-205ENST00000617647 PECAM1P16284 738 aaPredicted RBP8.36□□□□□ -1.07
PDE6A-205ENST00000617647 GGCXP38435 758 aa8.36□□□□□ -1.07
PDE6A-205ENST00000617647 RPS6KA3P51812 740 aa8.36□□□□□ -1.07
PDE6A-205ENST00000617647 VSNL1P62760 191 aa8.36□□□□□ -1.07
PDE6A-205ENST00000617647 CCT2P78371 535 aaKnown RBP8.36□□□□□ -1.07
PDE6A-205ENST00000617647 HIBCHQ6NVY1 386 aaPredicted RBP8.36□□□□□ -1.07
PDE6A-205ENST00000617647 ARMCX5Q6P1M9 558 aa8.36□□□□□ -1.07
PDE6A-205ENST00000617647 TAX1BP1Q86VP1 789 aa8.36□□□□□ -1.07
PDE6A-205ENST00000617647 ANKRD44Q8N8A2 993 aa8.36□□□□□ -1.07
PDE6A-205ENST00000617647 TRIM58Q8NG06 486 aa8.36□□□□□ -1.07
PDE6A-205ENST00000617647 TRPM1Q7Z4N2 1603 aa8.36□□□□□ -1.07
PDE6A-205ENST00000617647 ASXL1Q8IXJ9 1541 aa8.36□□□□□ -1.07
PDE6A-205ENST00000617647 PREX2Q70Z35 1606 aa8.35□□□□□ -1.07
PDE6A-205ENST00000617647 CREB3O43889 395 aa8.35□□□□□ -1.07
PDE6A-205ENST00000617647 CKAP4Q07065 602 aaKnown RBP8.35□□□□□ -1.07
PDE6A-205ENST00000617647 THEMIS2Q5TEJ8 643 aa8.35□□□□□ -1.07
PDE6A-205ENST00000617647 C3orf20Q8ND61 904 aa8.35□□□□□ -1.07
PDE6A-205ENST00000617647 LMBR1Q8WVP7 490 aa8.35□□□□□ -1.07
PDE6A-205ENST00000617647 OSBPL9Q96SU4 736 aa8.35□□□□□ -1.07
PDE6A-205ENST00000617647 MYO5CQ9NQX4 1742 aa8.35□□□□□ -1.07
PDE6A-205ENST00000617647 GOLGA8KD6RF30 607 aa8.35□□□□□ -1.07
PDE6A-205ENST00000617647 CFAP58Q5T655 872 aa8.35□□□□□ -1.07
PDE6A-205ENST00000617647 CEP128Q6ZU80 1094 aa8.35□□□□□ -1.07
PDE6A-205ENST00000617647 KIAA0825Q8IV33 1275 aa8.35□□□□□ -1.07
PDE6A-205ENST00000617647 MRPS27Q92552 414 aaKnown RBP8.35□□□□□ -1.07
PDE6A-205ENST00000617647 BRF1Q92994 677 aa8.35□□□□□ -1.07
PDE6A-205ENST00000617647 SLC40A1Q9NP59 571 aa8.35□□□□□ -1.07
PDE6A-205ENST00000617647 GUCA1BQ9UMX6 200 aa8.35□□□□□ -1.07
PDE6A-205ENST00000617647 KANK1Q14678 1352 aa8.35□□□□□ -1.07
PDE6A-205ENST00000617647 A0A1B0GVL5 298 aa8.35□□□□□ -1.07
PDE6A-205ENST00000617647 C21orf2O43822 256 aa8.35□□□□□ -1.07
PDE6A-205ENST00000617647 GNAI2P04899 355 aa8.35□□□□□ -1.07
PDE6A-205ENST00000617647 GNAI3P08754 354 aa8.35□□□□□ -1.07
PDE6A-205ENST00000617647 MYBL1P10243 752 aa8.35□□□□□ -1.07
PDE6A-205ENST00000617647 INF2Q27J81 1249 aa8.35□□□□□ -1.07
PDE6A-205ENST00000617647 TSGA10IPQ3SY00 556 aa8.35□□□□□ -1.07
PDE6A-205ENST00000617647 SLC12A5Q9H2X9 1139 aa8.35□□□□□ -1.07
PDE6A-205ENST00000617647 RTL1A6NKG5 1358 aa8.34□□□□□ -1.07
PDE6A-205ENST00000617647 LUC7L3O95232 432 aaKnown RBP8.34□□□□□ -1.07
PDE6A-205ENST00000617647 TUBB2AQ13885 445 aa8.34□□□□□ -1.07
PDE6A-205ENST00000617647 BEND6Q5SZJ8 279 aaPredicted RBP8.34□□□□□ -1.07
PDE6A-205ENST00000617647 MYSM1Q5VVJ2 828 aa8.34□□□□□ -1.07
PDE6A-205ENST00000617647 RUFY3Q7L099 469 aa8.34□□□□□ -1.07
PDE6A-205ENST00000617647 EHBP1Q8NDI1 1231 aa8.34□□□□□ -1.07
PDE6A-205ENST00000617647 ZNF483Q8TF39 744 aaPredicted RBP8.34□□□□□ -1.07
PDE6A-205ENST00000617647 FAXDC2Q96IV6 333 aa8.34□□□□□ -1.07
PDE6A-205ENST00000617647 CLIC6Q96NY7 704 aa8.34□□□□□ -1.07
PDE6A-205ENST00000617647 TUBB2BQ9BVA1 445 aa8.34□□□□□ -1.07
PDE6A-205ENST00000617647 OSBPL5Q9H0X9 879 aaPredicted RBP8.34□□□□□ -1.07
PDE6A-205ENST00000617647 ACTR5Q9H9F9 607 aaPredicted RBP8.34□□□□□ -1.07
PDE6A-205ENST00000617647 SNX14Q9Y5W7 946 aa8.34□□□□□ -1.07
PDE6A-205ENST00000617647 COL17A1Q9UMD9 1497 aaPredicted RBP8.34□□□□□ -1.07
PDE6A-205ENST00000617647 CUTAO60888 179 aa8.34□□□□□ -1.07
PDE6A-205ENST00000617647 ZNF202O95125 648 aa8.34□□□□□ -1.07
PDE6A-205ENST00000617647 ECEL1O95672 775 aa8.34□□□□□ -1.07
PDE6A-205ENST00000617647 PRKAR2BP31323 418 aa8.34□□□□□ -1.07
PDE6A-205ENST00000617647 ZC3H6P61129 1189 aaKnown RBP8.34□□□□□ -1.07
PDE6A-205ENST00000617647 MAP3K9P80192 1104 aa8.34□□□□□ -1.07
PDE6A-205ENST00000617647 TBC1D8BQ0IIM8 1120 aa8.34□□□□□ -1.07
PDE6A-205ENST00000617647 CCDC93Q567U6 631 aa8.34□□□□□ -1.07
PDE6A-205ENST00000617647 ACBD5Q5T8D3 534 aaPredicted RBP8.34□□□□□ -1.07
PDE6A-205ENST00000617647 NUTM2GQ5VZR2 741 aa8.34□□□□□ -1.07
PDE6A-205ENST00000617647 CCDC170Q8IYT3 715 aa8.34□□□□□ -1.07
PDE6A-205ENST00000617647 HAUS2Q9NVX0 235 aa8.34□□□□□ -1.07
PDE6A-205ENST00000617647 RNF17Q9BXT8 1623 aaKnown RBP8.34□□□□□ -1.07
PDE6A-205ENST00000617647 EME2A4GXA9 379 aaPredicted RBP8.34□□□□□ -1.07
PDE6A-205ENST00000617647 KCNV1Q6PIU1 500 aa8.34□□□□□ -1.07
PDE6A-205ENST00000617647 ANKS4BQ8N8V4 417 aa8.34□□□□□ -1.07
PDE6A-205ENST00000617647 SAMD9LQ8IVG5 1584 aa8.34□□□□□ -1.07
PDE6A-205ENST00000617647 CUL3Q13618 768 aa8.33□□□□□ -1.08
PDE6A-205ENST00000617647 ARFGAP2Q8N6H7 521 aa8.33□□□□□ -1.08
PDE6A-205ENST00000617647 NSMCE1Q8WV22 266 aa8.33□□□□□ -1.08
PDE6A-205ENST00000617647 SOS1Q07889 1333 aaPredicted RBP8.33□□□□□ -1.08
PDE6A-205ENST00000617647 SYCP2Q9BX26 1530 aa8.33□□□□□ -1.08
PDE6A-205ENST00000617647 EIF3HO15372 352 aaKnown RBP eCLIP8.33□□□□□ -1.08
PDE6A-205ENST00000617647 LONRF3Q496Y0 759 aa8.33□□□□□ -1.08
PDE6A-205ENST00000617647 KLHL10Q6JEL2 608 aa8.33□□□□□ -1.08
PDE6A-205ENST00000617647 DZIP1Q86YF9 867 aaKnown RBP8.33□□□□□ -1.08
PDE6A-205ENST00000617647 GGNBP2Q9H3C7 697 aa8.33□□□□□ -1.08
PDE6A-205ENST00000617647 CDC42BPBQ9Y5S2 1711 aa8.33□□□□□ -1.08
PDE6A-205ENST00000617647 UNC13BO14795 1591 aa8.33□□□□□ -1.08
PDE6A-205ENST00000617647 CPLX1O14810 134 aa8.33□□□□□ -1.08
PDE6A-205ENST00000617647 PYGLP06737 847 aa8.33□□□□□ -1.08
PDE6A-205ENST00000617647 IFIT2P09913 472 aaKnown RBP8.33□□□□□ -1.08
PDE6A-205ENST00000617647 LACTBP83111 547 aaPredicted RBP8.33□□□□□ -1.08
PDE6A-205ENST00000617647 MYL5Q02045 173 aa8.33□□□□□ -1.08
PDE6A-205ENST00000617647 SPECC1LQ69YQ0 1117 aa8.33□□□□□ -1.08
PDE6A-205ENST00000617647 FCHSD1Q86WN1 690 aa8.33□□□□□ -1.08
PDE6A-205ENST00000617647 AMOTL1Q8IY63 956 aa8.33□□□□□ -1.08
PDE6A-205ENST00000617647 CACNA2D3Q8IZS8 1091 aa8.33□□□□□ -1.08
PDE6A-205ENST00000617647 MRPL50Q8N5N7 158 aaKnown RBP8.33□□□□□ -1.08
PDE6A-205ENST00000617647 WHAMMQ8TF30 809 aa8.33□□□□□ -1.08
PDE6A-205ENST00000617647 IL17RAQ96F46 866 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms