RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 LRRC37AA6NMS7 1700 aa24.48■■□□□ 1.51
CNTNAP3B-212ENST00000617422 LTBP1Q14766 1721 aa24.48■■□□□ 1.51
CNTNAP3B-212ENST00000617422 BBOX1O75936 387 aa24.47■■□□□ 1.51
CNTNAP3B-212ENST00000617422 NUCB2P80303 420 aa24.47■■□□□ 1.51
CNTNAP3B-212ENST00000617422 IMMTQ16891 758 aaKnown RBP24.47■■□□□ 1.51
CNTNAP3B-212ENST00000617422 ZSCAN31Q96LW9 406 aaPredicted RBP24.47■■□□□ 1.51
CNTNAP3B-212ENST00000617422 TRAK2O60296 914 aa24.47■■□□□ 1.51
CNTNAP3B-212ENST00000617422 SRGNP10124 158 aa24.47■■□□□ 1.51
CNTNAP3B-212ENST00000617422 CYP7A1P22680 504 aa24.47■■□□□ 1.51
CNTNAP3B-212ENST00000617422 DHX32Q7L7V1 743 aaKnown RBP24.47■■□□□ 1.51
CNTNAP3B-212ENST00000617422 CHST3Q7LGC8 479 aa24.47■■□□□ 1.51
CNTNAP3B-212ENST00000617422 APPP05067 770 aa24.46■■□□□ 1.51
CNTNAP3B-212ENST00000617422 CHAF1AQ13111 956 aaPredicted RBP24.46■■□□□ 1.51
CNTNAP3B-212ENST00000617422 SH2B1Q9NRF2 756 aaPredicted RBP24.46■■□□□ 1.51
CNTNAP3B-212ENST00000617422 PDS5AQ29RF7 1337 aaKnown RBP24.46■■□□□ 1.51
CNTNAP3B-212ENST00000617422 GSG1L2A8MUP6 293 aa24.46■■□□□ 1.51
CNTNAP3B-212ENST00000617422 DEFB132Q7Z7B7 95 aa24.46■■□□□ 1.51
CNTNAP3B-212ENST00000617422 PDGFDQ9GZP0 370 aaPredicted RBP24.46■■□□□ 1.51
CNTNAP3B-212ENST00000617422 PARP3Q9Y6F1 533 aa24.46■■□□□ 1.51
CNTNAP3B-212ENST00000617422 TBC1D10CQ8IV04 446 aa24.45■■□□□ 1.5
CNTNAP3B-212ENST00000617422 PATL2C9JE40 543 aaKnown RBP24.44■■□□□ 1.5
CNTNAP3B-212ENST00000617422 ZNF213O14771 459 aa24.44■■□□□ 1.5
CNTNAP3B-212ENST00000617422 UFL1O94874 794 aa24.44■■□□□ 1.5
CNTNAP3B-212ENST00000617422 PRDX5P30044 214 aa24.44■■□□□ 1.5
CNTNAP3B-212ENST00000617422 ANKRD1Q15327 319 aa24.44■■□□□ 1.5
CNTNAP3B-212ENST00000617422 OLFM4Q6UX06 510 aa24.44■■□□□ 1.5
CNTNAP3B-212ENST00000617422 POLLQ9UGP5 575 aa24.44■■□□□ 1.5
CNTNAP3B-212ENST00000617422 ISY1Q9ULR0 285 aaKnown RBP24.44■■□□□ 1.5
CNTNAP3B-212ENST00000617422 HMGB1P09429 215 aaKnown RBP24.44■■□□□ 1.5
CNTNAP3B-212ENST00000617422 IFNL3Q8IZI9 196 aa24.44■■□□□ 1.5
CNTNAP3B-212ENST00000617422 BRF1Q92994 677 aa24.44■■□□□ 1.5
CNTNAP3B-212ENST00000617422 CHAMP1Q96JM3 812 aa24.44■■□□□ 1.5
CNTNAP3B-212ENST00000617422 ALX1Q15699 326 aa24.43■■□□□ 1.5
CNTNAP3B-212ENST00000617422 FOXD4L5Q5VV16 416 aaPredicted RBP24.43■■□□□ 1.5
CNTNAP3B-212ENST00000617422 CLEC17AQ6ZS10 378 aa24.43■■□□□ 1.5
CNTNAP3B-212ENST00000617422 C15orf52Q6ZUT6 534 aaKnown RBP24.43■■□□□ 1.5
CNTNAP3B-212ENST00000617422 FOXD4L4Q8WXT5 416 aaPredicted RBP24.43■■□□□ 1.5
CNTNAP3B-212ENST00000617422 NSUN4Q96CB9 384 aaKnown RBP24.43■■□□□ 1.5
CNTNAP3B-212ENST00000617422 MECOMQ03112 1051 aa24.43■■□□□ 1.5
CNTNAP3B-212ENST00000617422 TDRD7Q8NHU6 1098 aaKnown RBP24.43■■□□□ 1.5
CNTNAP3B-212ENST00000617422 RIOK1Q9BRS2 568 aaKnown RBP24.43■■□□□ 1.5
CNTNAP3B-212ENST00000617422 AGXT2Q9BYV1 514 aa24.43■■□□□ 1.5
CNTNAP3B-212ENST00000617422 GPHNQ9NQX3 736 aaPredicted RBP24.43■■□□□ 1.5
CNTNAP3B-212ENST00000617422 PODXL2Q9NZ53 605 aa24.43■■□□□ 1.5
CNTNAP3B-212ENST00000617422 BRD1O95696 1058 aa24.42■■□□□ 1.5
CNTNAP3B-212ENST00000617422 STK3Q13188 491 aa24.42■■□□□ 1.5
CNTNAP3B-212ENST00000617422 MB21D2Q8IYB1 491 aaPredicted RBP24.42■■□□□ 1.5
CNTNAP3B-212ENST00000617422 TBC1D16Q8TBP0 767 aa24.42■■□□□ 1.5
CNTNAP3B-212ENST00000617422 TACC3Q9Y6A5 838 aa24.42■■□□□ 1.5
CNTNAP3B-212ENST00000617422 PPEF1O14829 653 aaPredicted RBP24.42■■□□□ 1.5
CNTNAP3B-212ENST00000617422 ZBTB22O15209 634 aa24.42■■□□□ 1.5
CNTNAP3B-212ENST00000617422 BAG4O95429 457 aaKnown RBP24.42■■□□□ 1.5
CNTNAP3B-212ENST00000617422 PTMSP20962 102 aa24.42■■□□□ 1.5
CNTNAP3B-212ENST00000617422 QSER1Q2KHR3 1735 aa24.42■■□□□ 1.5
CNTNAP3B-212ENST00000617422 INCENPQ9NQS7 918 aa24.42■■□□□ 1.5
CNTNAP3B-212ENST00000617422 GGA1Q9UJY5 639 aa24.42■■□□□ 1.5
CNTNAP3B-212ENST00000617422 SLC4A4Q9Y6R1 1079 aa24.42■■□□□ 1.5
CNTNAP3B-212ENST00000617422 XRCC6P12956 609 aaKnown RBP eCLIP24.41■■□□□ 1.5
CNTNAP3B-212ENST00000617422 ANTXR2P58335 489 aa24.41■■□□□ 1.5
CNTNAP3B-212ENST00000617422 DYNLL1P63167 89 aaKnown RBP24.41■■□□□ 1.5
CNTNAP3B-212ENST00000617422 NAA16Q6N069 864 aaPredicted RBP24.41■■□□□ 1.5
CNTNAP3B-212ENST00000617422 STK32BQ9NY57 414 aa24.41■■□□□ 1.5
CNTNAP3B-212ENST00000617422 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.41■■□□□ 1.5
CNTNAP3B-212ENST00000617422 NPR1P16066 1061 aa24.4■■□□□ 1.5
CNTNAP3B-212ENST00000617422 ATP2B4P23634 1241 aa24.4■■□□□ 1.5
CNTNAP3B-212ENST00000617422 GRIK5Q16478 980 aa24.4■■□□□ 1.5
CNTNAP3B-212ENST00000617422 ZMYM6O95789 1325 aa24.4■■□□□ 1.5
CNTNAP3B-212ENST00000617422 SP8Q8IXZ3 490 aa24.4■■□□□ 1.5
CNTNAP3B-212ENST00000617422 SDR42E1Q8WUS8 393 aa24.4■■□□□ 1.5
CNTNAP3B-212ENST00000617422 SMC3Q9UQE7 1217 aa24.4■■□□□ 1.5
CNTNAP3B-212ENST00000617422 ATP6V0A2Q9Y487 856 aa24.4■■□□□ 1.5
CNTNAP3B-212ENST00000617422 DUOX1Q9NRD9 1551 aa24.4■■□□□ 1.5
CNTNAP3B-212ENST00000617422 MAGEB6P1A0A0J9YX57 407 aa24.39■■□□□ 1.5
CNTNAP3B-212ENST00000617422 GJB2P29033 226 aa24.39■■□□□ 1.5
CNTNAP3B-212ENST00000617422 MRE11P49959 708 aa24.39■■□□□ 1.5
CNTNAP3B-212ENST00000617422 APOBRQ0VD83 1088 aa24.39■■□□□ 1.5
CNTNAP3B-212ENST00000617422 GBP4Q96PP9 640 aa24.39■■□□□ 1.5
CNTNAP3B-212ENST00000617422 PDE6BP35913 854 aa24.39■■□□□ 1.49
CNTNAP3B-212ENST00000617422 NAPBQ9H115 298 aa24.39■■□□□ 1.49
CNTNAP3B-212ENST00000617422 MAST2Q6P0Q8 1798 aa24.38■■□□□ 1.49
CNTNAP3B-212ENST00000617422 CCDC88AQ3V6T2 1871 aa24.38■■□□□ 1.49
CNTNAP3B-212ENST00000617422 ZNF804AQ7Z570 1209 aa24.38■■□□□ 1.49
CNTNAP3B-212ENST00000617422 CD209Q9NNX6 404 aa24.38■■□□□ 1.49
CNTNAP3B-212ENST00000617422 CHD4Q14839 1912 aa24.38■■□□□ 1.49
CNTNAP3B-212ENST00000617422 SMIM22K7EJ46 135 aa24.37■■□□□ 1.49
CNTNAP3B-212ENST00000617422 CTDSPL2Q05D32 466 aa24.37■■□□□ 1.49
CNTNAP3B-212ENST00000617422 GTF3C6Q969F1 213 aa24.37■■□□□ 1.49
CNTNAP3B-212ENST00000617422 NEDD4P46934 1319 aa24.37■■□□□ 1.49
CNTNAP3B-212ENST00000617422 GNAT2P19087 354 aa24.37■■□□□ 1.49
CNTNAP3B-212ENST00000617422 SYT1P21579 422 aa24.37■■□□□ 1.49
CNTNAP3B-212ENST00000617422 NCOA7Q8NI08 942 aa24.37■■□□□ 1.49
CNTNAP3B-212ENST00000617422 GZF1Q9H116 711 aaPredicted RBP24.37■■□□□ 1.49
CNTNAP3B-212ENST00000617422 BAZ2AQ9UIF9 1905 aaKnown RBP24.36■■□□□ 1.49
CNTNAP3B-212ENST00000617422 PRC1O43663 620 aa24.36■■□□□ 1.49
CNTNAP3B-212ENST00000617422 FGD1P98174 961 aa24.36■■□□□ 1.49
CNTNAP3B-212ENST00000617422 TIAM2Q8IVF5 1701 aa24.36■■□□□ 1.49
CNTNAP3B-212ENST00000617422 SALL1Q9NSC2 1324 aa24.36■■□□□ 1.49
CNTNAP3B-212ENST00000617422 SCRN1Q12765 414 aa24.36■■□□□ 1.49
CNTNAP3B-212ENST00000617422 CYB5R4Q7L1T6 521 aa24.36■■□□□ 1.49
CNTNAP3B-212ENST00000617422 MASTLQ96GX5 879 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms