RNA–Protein interactions for RNA: ENST00000617293.4

SUSD3-205, Transcript of sushi domain containing 3, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SUSD3, Length 1,076 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-205ENST00000617293 IL1RAPL2Q9NP60 686 aa23.18■■□□□ 1.3
SUSD3-205ENST00000617293 MKRN1Q9UHC7 482 aaKnown RBP23.18■■□□□ 1.3
SUSD3-205ENST00000617293 MAST3O60307 1309 aa23.17■■□□□ 1.3
SUSD3-205ENST00000617293 CLRN2A0PK11 232 aa23.17■■□□□ 1.3
SUSD3-205ENST00000617293 ZBTB22O15209 634 aa23.17■■□□□ 1.3
SUSD3-205ENST00000617293 HDLBPQ00341 1268 aaKnown RBP23.17■■□□□ 1.3
SUSD3-205ENST00000617293 TTC39AQ5SRH9 613 aa23.17■■□□□ 1.3
SUSD3-205ENST00000617293 TEKT1Q969V4 418 aa23.17■■□□□ 1.3
SUSD3-205ENST00000617293 KLRG1Q96E93 195 aa23.17■■□□□ 1.3
SUSD3-205ENST00000617293 CDCA5Q96FF9 252 aa23.17■■□□□ 1.3
SUSD3-205ENST00000617293 SALL1Q9NSC2 1324 aa23.16■■□□□ 1.3
SUSD3-205ENST00000617293 LDHBP07195 334 aaKnown RBP23.16■■□□□ 1.3
SUSD3-205ENST00000617293 UQCRFS1P1P0C7P4 283 aa23.16■■□□□ 1.3
SUSD3-205ENST00000617293 ARID4AP29374 1257 aaPredicted RBP23.16■■□□□ 1.3
SUSD3-205ENST00000617293 PRDX5P30044 214 aa23.16■■□□□ 1.3
SUSD3-205ENST00000617293 APOBEC3FQ8IUX4 373 aaKnown RBP23.16■■□□□ 1.3
SUSD3-205ENST00000617293 ZGPATQ8N5A5 531 aaKnown RBP23.16■■□□□ 1.3
SUSD3-205ENST00000617293 KIF1BPQ96EK5 621 aa23.16■■□□□ 1.3
SUSD3-205ENST00000617293 VEZTQ9HBM0 779 aa23.16■■□□□ 1.3
SUSD3-205ENST00000617293 HMG20BQ9P0W2 317 aa23.16■■□□□ 1.3
SUSD3-205ENST00000617293 ABCF2Q9UG63 623 aa23.16■■□□□ 1.3
SUSD3-205ENST00000617293 SUPT16HQ9Y5B9 1047 aaKnown RBP23.16■■□□□ 1.3
SUSD3-205ENST00000617293 AOX1Q06278 1338 aa23.15■■□□□ 1.3
SUSD3-205ENST00000617293 RAB11FIP3O75154 756 aa23.15■■□□□ 1.3
SUSD3-205ENST00000617293 PRAMEF18Q5VWM3 479 aa23.15■■□□□ 1.3
SUSD3-205ENST00000617293 AACSQ86V21 672 aa23.15■■□□□ 1.3
SUSD3-205ENST00000617293 SPATA5Q8NB90 893 aa23.15■■□□□ 1.3
SUSD3-205ENST00000617293 MRIQ9BWK5 157 aa23.15■■□□□ 1.3
SUSD3-205ENST00000617293 TDRD3Q9H7E2 651 aaKnown RBP23.15■■□□□ 1.3
SUSD3-205ENST00000617293 TLR7Q9NYK1 1049 aaKnown RBP23.15■■□□□ 1.3
SUSD3-205ENST00000617293 DBNLQ9UJU6 430 aaKnown RBP23.15■■□□□ 1.3
SUSD3-205ENST00000617293 ECM29Q5VYK3 1845 aa23.15■■□□□ 1.3
SUSD3-205ENST00000617293 PDS5AQ29RF7 1337 aaKnown RBP23.14■■□□□ 1.3
SUSD3-205ENST00000617293 MCAMP43121 646 aa23.14■■□□□ 1.29
SUSD3-205ENST00000617293 DEFB115Q30KQ5 88 aa23.14■■□□□ 1.29
SUSD3-205ENST00000617293 PI16Q6UXB8 463 aa23.14■■□□□ 1.29
SUSD3-205ENST00000617293 CLASRPQ8N2M8 674 aaKnown RBP23.14■■□□□ 1.29
SUSD3-205ENST00000617293 PCDHB15Q9Y5E8 787 aa23.14■■□□□ 1.29
SUSD3-205ENST00000617293 HHIPL2Q6UWX4 724 aa23.13■■□□□ 1.29
SUSD3-205ENST00000617293 ZNF70Q9UC06 446 aaPredicted RBP23.13■■□□□ 1.29
SUSD3-205ENST00000617293 TLL2Q9Y6L7 1015 aa23.13■■□□□ 1.29
SUSD3-205ENST00000617293 DIXDC1Q155Q3 683 aa23.12■■□□□ 1.29
SUSD3-205ENST00000617293 SPTY2D1Q68D10 685 aaPredicted RBP23.12■■□□□ 1.29
SUSD3-205ENST00000617293 TBC1D9Q6ZT07 1266 aa23.12■■□□□ 1.29
SUSD3-205ENST00000617293 C2orf69Q8N8R5 385 aa23.12■■□□□ 1.29
SUSD3-205ENST00000617293 ZDHHC15Q96MV8 337 aa23.12■■□□□ 1.29
SUSD3-205ENST00000617293 DEFB129Q9H1M3 183 aa23.12■■□□□ 1.29
SUSD3-205ENST00000617293 GBA2Q9HCG7 927 aaPredicted RBP23.12■■□□□ 1.29
SUSD3-205ENST00000617293 SNRKQ9NRH2 765 aa23.12■■□□□ 1.29
SUSD3-205ENST00000617293 CNTNAP1P78357 1384 aa23.12■■□□□ 1.29
SUSD3-205ENST00000617293 RASSF10A6NK89 507 aa23.11■■□□□ 1.29
SUSD3-205ENST00000617293 SPDYE2Q495Y8 402 aa23.11■■□□□ 1.29
SUSD3-205ENST00000617293 PAXIP1Q6ZW49 1069 aaPredicted RBP23.11■■□□□ 1.29
SUSD3-205ENST00000617293 ERICH6Q7L0X2 663 aa23.11■■□□□ 1.29
SUSD3-205ENST00000617293 SAPCD2Q86UD0 394 aa23.11■■□□□ 1.29
SUSD3-205ENST00000617293 IFIT2P09913 472 aaKnown RBP23.1■■□□□ 1.29
SUSD3-205ENST00000617293 APOBEC3HQ6NTF7 200 aaKnown RBP23.1■■□□□ 1.29
SUSD3-205ENST00000617293 DZIP1Q86YF9 867 aaKnown RBP23.1■■□□□ 1.29
SUSD3-205ENST00000617293 ZNF512BQ96KM6 892 aaPredicted RBP23.09■■□□□ 1.29
SUSD3-205ENST00000617293 DCTPP1Q9H773 170 aa23.09■■□□□ 1.29
SUSD3-205ENST00000617293 DAGLAQ9Y4D2 1042 aa23.09■■□□□ 1.29
SUSD3-205ENST00000617293 TCP10L2B9ZVM9 353 aa23.08■■□□□ 1.29
SUSD3-205ENST00000617293 NF2P35240 595 aa23.08■■□□□ 1.29
SUSD3-205ENST00000617293 VEGFBP49765 207 aa23.08■■□□□ 1.29
SUSD3-205ENST00000617293 HUNKP57058 714 aa23.08■■□□□ 1.29
SUSD3-205ENST00000617293 GRM1Q13255 1194 aa23.08■■□□□ 1.29
SUSD3-205ENST00000617293 RASA3Q14644 834 aa23.08■■□□□ 1.29
SUSD3-205ENST00000617293 LRRCC1Q9C099 1032 aa23.08■■□□□ 1.29
SUSD3-205ENST00000617293 TMOD2Q9NZR1 351 aa23.08■■□□□ 1.29
SUSD3-205ENST00000617293 SMARCA5O60264 1052 aaPredicted RBP23.07■■□□□ 1.28
SUSD3-205ENST00000617293 CACNB3P54284 484 aa23.07■■□□□ 1.28
SUSD3-205ENST00000617293 TNFAIP1Q13829 316 aa23.07■■□□□ 1.28
SUSD3-205ENST00000617293 SLF2Q8IX21 1173 aa23.07■■□□□ 1.28
SUSD3-205ENST00000617293 RAI14Q9P0K7 980 aa23.07■■□□□ 1.28
SUSD3-205ENST00000617293 LRP2BPQ9P2M1 347 aa23.07■■□□□ 1.28
SUSD3-205ENST00000617293 PPP2R3BQ9Y5P8 575 aa23.07■■□□□ 1.28
SUSD3-205ENST00000617293 AKAP11Q9UKA4 1901 aa23.07■■□□□ 1.28
SUSD3-205ENST00000617293 MYH2Q9UKX2 1941 aa23.07■■□□□ 1.28
SUSD3-205ENST00000617293 ZAP70P43403 619 aa23.06■■□□□ 1.28
SUSD3-205ENST00000617293 TNNI2P48788 182 aa23.06■■□□□ 1.28
SUSD3-205ENST00000617293 MECOMQ03112 1051 aa23.06■■□□□ 1.28
SUSD3-205ENST00000617293 TTLL12Q14166 644 aaPredicted RBP23.06■■□□□ 1.28
SUSD3-205ENST00000617293 CYP4F22Q6NT55 531 aa23.06■■□□□ 1.28
SUSD3-205ENST00000617293 CYP2E1P05181 493 aaPredicted RBP23.05■■□□□ 1.28
SUSD3-205ENST00000617293 PRKG1Q13976 671 aa23.05■■□□□ 1.28
SUSD3-205ENST00000617293 MOB2Q70IA6 237 aa23.05■■□□□ 1.28
SUSD3-205ENST00000617293 JMYQ8N9B5 988 aa23.05■■□□□ 1.28
SUSD3-205ENST00000617293 EXOC6Q8TAG9 804 aa23.05■■□□□ 1.28
SUSD3-205ENST00000617293 WDR33Q9C0J8 1336 aaKnown RBP23.05■■□□□ 1.28
SUSD3-205ENST00000617293 ECE1P42892 770 aa23.04■■□□□ 1.28
SUSD3-205ENST00000617293 FKBP1BP68106 108 aa23.04■■□□□ 1.28
SUSD3-205ENST00000617293 CDC42EP5Q6NZY7 148 aa23.04■■□□□ 1.28
SUSD3-205ENST00000617293 HHIPL1Q96JK4 782 aa23.04■■□□□ 1.28
SUSD3-205ENST00000617293 CAPNS2Q96L46 248 aa23.04■■□□□ 1.28
SUSD3-205ENST00000617293 USP40Q9NVE5 1235 aa23.04■■□□□ 1.28
SUSD3-205ENST00000617293 NDUFB9Q9Y6M9 179 aa23.04■■□□□ 1.28
SUSD3-205ENST00000617293 AAMPQ13685 434 aa23.03■■□□□ 1.28
SUSD3-205ENST00000617293 SUPT20HL1Q3ZLR7 823 aa23.03■■□□□ 1.28
SUSD3-205ENST00000617293 NBPF12Q5TAG4 269 aaPredicted RBP23.03■■□□□ 1.28
SUSD3-205ENST00000617293 NSUN4Q96CB9 384 aaKnown RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms