RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.83■□□□□ 0.441e-19■■□□□ 12.8
NOP56-220ENST00000616692 NEDD9Q14511 834 aa17.83■□□□□ 0.44
NOP56-220ENST00000616692 RNF20Q5VTR2 975 aa17.83■□□□□ 0.44
NOP56-220ENST00000616692 MCTP1Q6DN14 999 aa17.83■□□□□ 0.44
NOP56-220ENST00000616692 CRACR2AQ9BSW2 395 aa17.83■□□□□ 0.44
NOP56-220ENST00000616692 SRRTQ9BXP5 876 aaKnown RBP17.83■□□□□ 0.44
NOP56-220ENST00000616692 IMPDH2P12268 514 aa17.82■□□□□ 0.44
NOP56-220ENST00000616692 RASA3Q14644 834 aa17.82■□□□□ 0.44
NOP56-220ENST00000616692 RTF1Q92541 710 aaKnown RBP17.82■□□□□ 0.44
NOP56-220ENST00000616692 KCPQ6ZWJ8 1503 aa17.82■□□□□ 0.44
NOP56-220ENST00000616692 A0A087WZG4 1122 aa17.82■□□□□ 0.44
NOP56-220ENST00000616692 RBM47A0AV96 593 aaKnown RBP17.82■□□□□ 0.44
NOP56-220ENST00000616692 CDKL5O76039 1030 aa17.82■□□□□ 0.44
NOP56-220ENST00000616692 PNMA6AP0CW24 399 aaPredicted RBP17.82■□□□□ 0.44
NOP56-220ENST00000616692 BAG1Q99933 345 aaPredicted RBP17.82■□□□□ 0.44
NOP56-220ENST00000616692 TSPY26PQ9H489 355 aa17.82■□□□□ 0.44
NOP56-220ENST00000616692 LARP6Q9BRS8 491 aaKnown RBP17.81■□□□□ 0.44
NOP56-220ENST00000616692 EME2A4GXA9 379 aaPredicted RBP17.81■□□□□ 0.44
NOP56-220ENST00000616692 PTCD1O75127 700 aaKnown RBP17.81■□□□□ 0.44
NOP56-220ENST00000616692 CYP19A1P11511 503 aaPredicted RBP17.81■□□□□ 0.44
NOP56-220ENST00000616692 CRYMQ14894 314 aa17.81■□□□□ 0.44
NOP56-220ENST00000616692 NUTM1Q86Y26 1132 aa17.81■□□□□ 0.44
NOP56-220ENST00000616692 MYLK4Q86YV6 388 aaPredicted RBP17.81■□□□□ 0.44
NOP56-220ENST00000616692 MICAL1Q8TDZ2 1067 aa17.81■□□□□ 0.44
NOP56-220ENST00000616692 NMRK2Q9NPI5 230 aa17.81■□□□□ 0.44
NOP56-220ENST00000616692 BIN2Q9UBW5 565 aaPredicted RBP17.81■□□□□ 0.44
NOP56-220ENST00000616692 UBR2Q8IWV8 1755 aa17.8■□□□□ 0.44
NOP56-220ENST00000616692 CDC37Q16543 378 aaPredicted RBP17.8■□□□□ 0.44
NOP56-220ENST00000616692 TADA2BQ86TJ2 420 aa17.8■□□□□ 0.44
NOP56-220ENST00000616692 KIF2AO00139 706 aaPredicted RBP17.8■□□□□ 0.44
NOP56-220ENST00000616692 RNMTO43148 476 aaKnown RBP17.8■□□□□ 0.44
NOP56-220ENST00000616692 CHMLP26374 656 aa17.8■□□□□ 0.44
NOP56-220ENST00000616692 SRP68Q9UHB9 627 aaKnown RBP17.8■□□□□ 0.44
NOP56-220ENST00000616692 EXOC6BQ9Y2D4 811 aa17.8■□□□□ 0.44
NOP56-220ENST00000616692 SBF1O95248 1867 aa17.79■□□□□ 0.44
NOP56-220ENST00000616692 HHATQ5VTY9 493 aa17.79■□□□□ 0.44
NOP56-220ENST00000616692 SMC1BQ8NDV3 1235 aa17.79■□□□□ 0.44
NOP56-220ENST00000616692 KLRG1Q96E93 195 aa17.79■□□□□ 0.44
NOP56-220ENST00000616692 TMEM63CQ9P1W3 806 aa17.79■□□□□ 0.44
NOP56-220ENST00000616692 EXOC4Q96A65 974 aa17.79■□□□□ 0.44
NOP56-220ENST00000616692 MTA3Q9BTC8 594 aa17.79■□□□□ 0.44
NOP56-220ENST00000616692 COL15A1P39059 1388 aa17.78■□□□□ 0.44
NOP56-220ENST00000616692 IGHDP01880 384 aa17.78■□□□□ 0.44
NOP56-220ENST00000616692 ELF2Q15723 593 aa17.78■□□□□ 0.44
NOP56-220ENST00000616692 ANKRD45Q5TZF3 282 aa17.78■□□□□ 0.44
NOP56-220ENST00000616692 RBM12BQ8IXT5 1001 aaKnown RBP17.78■□□□□ 0.44
NOP56-220ENST00000616692 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.78■□□□□ 0.44
NOP56-220ENST00000616692 RNF181Q9P0P0 153 aa17.78■□□□□ 0.44
NOP56-220ENST00000616692 MCM8Q9UJA3 840 aa17.78■□□□□ 0.44
NOP56-220ENST00000616692 WWC3Q9ULE0 1092 aa17.78■□□□□ 0.44
NOP56-220ENST00000616692 KIF7Q2M1P5 1343 aa17.78■□□□□ 0.44
NOP56-220ENST00000616692 H2AFXP16104 143 aaPredicted RBP17.78■□□□□ 0.44
NOP56-220ENST00000616692 NEXNQ0ZGT2 675 aa17.78■□□□□ 0.44
NOP56-220ENST00000616692 CPLX2Q6PUV4 134 aaKnown RBP17.78■□□□□ 0.44
NOP56-220ENST00000616692 DNAJC10Q8IXB1 793 aa17.78■□□□□ 0.44
NOP56-220ENST00000616692 ERO1AQ96HE7 468 aa17.78■□□□□ 0.44
NOP56-220ENST00000616692 KCNF1Q9H3M0 494 aa17.78■□□□□ 0.44
NOP56-220ENST00000616692 LRRC31Q6UY01 552 aa17.77■□□□□ 0.44
NOP56-220ENST00000616692 N4BP2L2Q92802 583 aaPredicted RBP17.77■□□□□ 0.44
NOP56-220ENST00000616692 CEP126Q9P2H0 1117 aa17.77■□□□□ 0.44
NOP56-220ENST00000616692 TMCO5BA8MYB1 307 aa17.77■□□□□ 0.44
NOP56-220ENST00000616692 ADCY5O95622 1261 aa17.77■□□□□ 0.44
NOP56-220ENST00000616692 LMNB1P20700 586 aa17.77■□□□□ 0.44
NOP56-220ENST00000616692 PDRG1Q9NUG6 133 aa17.77■□□□□ 0.44
NOP56-220ENST00000616692 REXO1L1PQ8IX06 675 aa17.76■□□□□ 0.43
NOP56-220ENST00000616692 CTCFLQ8NI51 663 aaPredicted RBP17.76■□□□□ 0.43
NOP56-220ENST00000616692 LMCD1Q9NZU5 365 aa17.76■□□□□ 0.43
NOP56-220ENST00000616692 AFDNP55196 1824 aaKnown RBP17.76■□□□□ 0.43
NOP56-220ENST00000616692 PRPHP41219 470 aa17.76■□□□□ 0.43
NOP56-220ENST00000616692 RHBDL3P58872 404 aa17.76■□□□□ 0.43
NOP56-220ENST00000616692 USPL1Q5W0Q7 1092 aa17.76■□□□□ 0.43
NOP56-220ENST00000616692 UBXN6Q9BZV1 441 aa17.76■□□□□ 0.43
NOP56-220ENST00000616692 A0A087WUV0 522 aaPredicted RBP17.75■□□□□ 0.43
NOP56-220ENST00000616692 BRD1O95696 1058 aa17.75■□□□□ 0.43
NOP56-220ENST00000616692 PECAM1P16284 738 aaPredicted RBP17.75■□□□□ 0.43
NOP56-220ENST00000616692 ALDH1B1P30837 517 aa17.75■□□□□ 0.43
NOP56-220ENST00000616692 ERC1Q8IUD2 1116 aa17.75■□□□□ 0.43
NOP56-220ENST00000616692 ANKRD18AQ8IVF6 992 aa17.75■□□□□ 0.43
NOP56-220ENST00000616692 PLEKHG4BQ96PX9 1271 aa17.75■□□□□ 0.43
NOP56-220ENST00000616692 FMNL2Q96PY5 1086 aa17.75■□□□□ 0.43
NOP56-220ENST00000616692 USP25Q9UHP3 1055 aa17.75■□□□□ 0.43
NOP56-220ENST00000616692 ZNF215Q9UL58 517 aaPredicted RBP17.75■□□□□ 0.43
NOP56-220ENST00000616692 HNRNPH1P31943 449 aaKnown RBP17.75■□□□□ 0.43
NOP56-220ENST00000616692 CCDC15Q0P6D6 951 aa17.75■□□□□ 0.43
NOP56-220ENST00000616692 NFIXQ14938 502 aa17.75■□□□□ 0.43
NOP56-220ENST00000616692 RGL2O15211 777 aa17.75■□□□□ 0.43
NOP56-220ENST00000616692 RTN2O75298 545 aa17.75■□□□□ 0.43
NOP56-220ENST00000616692 STARD3NLO95772 234 aa17.75■□□□□ 0.43
NOP56-220ENST00000616692 PDIA5Q14554 519 aa17.75■□□□□ 0.43
NOP56-220ENST00000616692 TTLL6Q8N841 843 aa17.75■□□□□ 0.43
NOP56-220ENST00000616692 RPS6KA5O75582 802 aa17.74■□□□□ 0.43
NOP56-220ENST00000616692 PYGLP06737 847 aa17.74■□□□□ 0.43
NOP56-220ENST00000616692 RDXP35241 583 aaKnown RBP17.74■□□□□ 0.43
NOP56-220ENST00000616692 LMAN1P49257 510 aa17.74■□□□□ 0.43
NOP56-220ENST00000616692 MCM6Q14566 821 aa17.74■□□□□ 0.43
NOP56-220ENST00000616692 CCDC178Q5BJE1 867 aa17.74■□□□□ 0.43
NOP56-220ENST00000616692 CWC27Q6UX04 472 aaKnown RBP17.74■□□□□ 0.43
NOP56-220ENST00000616692 CCDC34Q96HJ3 373 aa17.74■□□□□ 0.43
NOP56-220ENST00000616692 C16orf45Q96MC5 204 aaPredicted RBP17.74■□□□□ 0.43
NOP56-220ENST00000616692 IRX2Q9BZI1 471 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms