RNA–Protein interactions for RNA: ENST00000616383.1

MMP28-206, Transcript of matrix metallopeptidase 28, humanhuman

TSL 3

Gene MMP28, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-206ENST00000616383 IQSEC3Q9UPP2 1182 aaPredicted RBP13.32□□□□□ -0.28
MMP28-206ENST00000616383 SCN9AQ15858 1988 aa13.31□□□□□ -0.28
MMP28-206ENST00000616383 GOLIM4O00461 696 aa13.31□□□□□ -0.28
MMP28-206ENST00000616383 FKBP4Q02790 459 aaKnown RBP eCLIP13.31□□□□□ -0.28
MMP28-206ENST00000616383 ZNF804AQ7Z570 1209 aa13.31□□□□□ -0.28
MMP28-206ENST00000616383 HMG20BQ9P0W2 317 aa13.31□□□□□ -0.28
MMP28-206ENST00000616383 RIMBP2O15034 1052 aa13.3□□□□□ -0.28
MMP28-206ENST00000616383 SEMA3EO15041 775 aa13.3□□□□□ -0.28
MMP28-206ENST00000616383 ZAP70P43403 619 aa13.3□□□□□ -0.28
MMP28-206ENST00000616383 SOGA3Q5TF21 947 aa13.3□□□□□ -0.28
MMP28-206ENST00000616383 TBC1D9Q6ZT07 1266 aa13.3□□□□□ -0.28
MMP28-206ENST00000616383 SPATA5Q8NB90 893 aa13.3□□□□□ -0.28
MMP28-206ENST00000616383 FSD1Q9BTV5 496 aa13.3□□□□□ -0.28
MMP28-206ENST00000616383 RTFDC1Q9BY42 306 aaPredicted RBP13.3□□□□□ -0.28
MMP28-206ENST00000616383 RFX7Q2KHR2 1363 aa13.3□□□□□ -0.28
MMP28-206ENST00000616383 FAM205CA6NFA0 338 aa13.29□□□□□ -0.28
MMP28-206ENST00000616383 GRIPAP1Q4V328 841 aa13.29□□□□□ -0.28
MMP28-206ENST00000616383 RTKN2Q8IZC4 609 aa13.29□□□□□ -0.28
MMP28-206ENST00000616383 KBTBD3Q8NAB2 608 aa13.29□□□□□ -0.28
MMP28-206ENST00000616383 SUPT20HQ8NEM7 779 aa13.29□□□□□ -0.28
MMP28-206ENST00000616383 SPOCK2Q92563 424 aa13.29□□□□□ -0.28
MMP28-206ENST00000616383 EYA3Q99504 573 aa13.29□□□□□ -0.28
MMP28-206ENST00000616383 ANTXR1Q9H6X2 564 aa13.29□□□□□ -0.28
MMP28-206ENST00000616383 BCS1LQ9Y276 419 aa13.29□□□□□ -0.28
MMP28-206ENST00000616383 FRAT2O75474 233 aaPredicted RBP13.28□□□□□ -0.28
MMP28-206ENST00000616383 CYP2E1P05181 493 aaPredicted RBP13.28□□□□□ -0.28
MMP28-206ENST00000616383 WASHC4Q2M389 1173 aa13.28□□□□□ -0.28
MMP28-206ENST00000616383 TDRD7Q8NHU6 1098 aaKnown RBP13.28□□□□□ -0.28
MMP28-206ENST00000616383 BACH2Q9BYV9 841 aa13.28□□□□□ -0.28
MMP28-206ENST00000616383 ZC3H12CQ9C0D7 883 aaKnown RBP13.28□□□□□ -0.28
MMP28-206ENST00000616383 PIH1D3Q9NQM4 214 aaKnown RBP13.28□□□□□ -0.28
MMP28-206ENST00000616383 DENND2AQ9ULE3 1009 aa13.28□□□□□ -0.28
MMP28-206ENST00000616383 DICER1Q9UPY3 1922 aaKnown RBP13.28□□□□□ -0.28
MMP28-206ENST00000616383 PDS5AQ29RF7 1337 aaKnown RBP13.28□□□□□ -0.28
MMP28-206ENST00000616383 IL1R1P14778 569 aa13.27□□□□□ -0.29
MMP28-206ENST00000616383 CHMLP26374 656 aa13.27□□□□□ -0.29
MMP28-206ENST00000616383 CHAF1AQ13111 956 aaPredicted RBP13.27□□□□□ -0.29
MMP28-206ENST00000616383 TTF1Q15361 905 aaPredicted RBP13.27□□□□□ -0.29
MMP28-206ENST00000616383 CASC1Q6TDU7 716 aa13.27□□□□□ -0.29
MMP28-206ENST00000616383 PSMD1Q99460 953 aa13.27□□□□□ -0.29
MMP28-206ENST00000616383 CD209Q9NNX6 404 aa13.27□□□□□ -0.29
MMP28-206ENST00000616383 DIAPH3Q9NSV4 1193 aa13.27□□□□□ -0.29
MMP28-206ENST00000616383 COL4A5P29400 1685 aa13.27□□□□□ -0.29
MMP28-206ENST00000616383 SBF1O95248 1867 aa13.27□□□□□ -0.29
MMP28-206ENST00000616383 AOC3Q16853 763 aa13.26□□□□□ -0.29
MMP28-206ENST00000616383 DOK7Q18PE1 504 aa13.26□□□□□ -0.29
MMP28-206ENST00000616383 DPY19L2Q6NUT2 758 aa13.26□□□□□ -0.29
MMP28-206ENST00000616383 SYT17Q9BSW7 474 aa13.26□□□□□ -0.29
MMP28-206ENST00000616383 COA1Q9GZY4 146 aa13.26□□□□□ -0.29
MMP28-206ENST00000616383 MYH2Q9UKX2 1941 aa13.26□□□□□ -0.29
MMP28-206ENST00000616383 JAG2Q9Y219 1238 aa13.26□□□□□ -0.29
MMP28-206ENST00000616383 HIP1O00291 1037 aa13.25□□□□□ -0.29
MMP28-206ENST00000616383 PPIP5K2O43314 1243 aa13.25□□□□□ -0.29
MMP28-206ENST00000616383 IDH1O75874 414 aaKnown RBP13.25□□□□□ -0.29
MMP28-206ENST00000616383 KIAA2012Q0VF49 1180 aa13.25□□□□□ -0.29
MMP28-206ENST00000616383 NMIQ13287 307 aaPredicted RBP13.25□□□□□ -0.29
MMP28-206ENST00000616383 HS3ST6Q96QI5 342 aa13.25□□□□□ -0.29
MMP28-206ENST00000616383 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.25□□□□□ -0.29
MMP28-206ENST00000616383 TAOK3Q9H2K8 898 aa13.25□□□□□ -0.29
MMP28-206ENST00000616383 ADAMTSL1Q8N6G6 1762 aa13.25□□□□□ -0.29
MMP28-206ENST00000616383 TIAM2Q8IVF5 1701 aa13.25□□□□□ -0.29
MMP28-206ENST00000616383 A0A0D9SFI3 127 aa13.24□□□□□ -0.29
MMP28-206ENST00000616383 NFKBIEO00221 500 aa13.24□□□□□ -0.29
MMP28-206ENST00000616383 ECE2O60344 883 aa13.24□□□□□ -0.29
MMP28-206ENST00000616383 CHGBP05060 677 aa13.24□□□□□ -0.29
MMP28-206ENST00000616383 ESYT1Q9BSJ8 1104 aa13.24□□□□□ -0.29
MMP28-206ENST00000616383 DBNDD1Q9H9R9 158 aa13.24□□□□□ -0.29
MMP28-206ENST00000616383 ZNF277Q9NRM2 450 aaPredicted RBP13.24□□□□□ -0.29
MMP28-206ENST00000616383 FAM205AQ6ZU69 1335 aa13.23□□□□□ -0.29
MMP28-206ENST00000616383 LTBP3Q9NS15 1303 aa13.23□□□□□ -0.29
MMP28-206ENST00000616383 SALL1Q9NSC2 1324 aa13.23□□□□□ -0.29
MMP28-206ENST00000616383 RNF113AO15541 343 aaKnown RBP13.23□□□□□ -0.29
MMP28-206ENST00000616383 LRRFIP1Q32MZ4 808 aaKnown RBP13.23□□□□□ -0.29
MMP28-206ENST00000616383 ZSCAN25Q6NSZ9 544 aa13.23□□□□□ -0.29
MMP28-206ENST00000616383 CWC27Q6UX04 472 aaKnown RBP13.23□□□□□ -0.29
MMP28-206ENST00000616383 TICAM2Q86XR7 235 aa13.23□□□□□ -0.29
MMP28-206ENST00000616383 WDR66Q8TBY9 1149 aa13.23□□□□□ -0.29
MMP28-206ENST00000616383 FAM227BQ96M60 508 aa13.23□□□□□ -0.29
MMP28-206ENST00000616383 LRP2BPQ9P2M1 347 aa13.23□□□□□ -0.29
MMP28-206ENST00000616383 ABCF2Q9UG63 623 aa13.23□□□□□ -0.29
MMP28-206ENST00000616383 BOLA1Q9Y3E2 137 aa13.23□□□□□ -0.29
MMP28-206ENST00000616383 CDK5RAP2Q96SN8 1893 aa13.23□□□□□ -0.29
MMP28-206ENST00000616383 RAD50Q92878 1312 aa13.22□□□□□ -0.29
MMP28-206ENST00000616383 ZFYP08048 801 aaPredicted RBP13.22□□□□□ -0.29
MMP28-206ENST00000616383 PDE6AP16499 860 aa13.22□□□□□ -0.29
MMP28-206ENST00000616383 IARSP41252 1262 aaKnown RBP13.22□□□□□ -0.29
MMP28-206ENST00000616383 MFAP1P55081 439 aaKnown RBP13.22□□□□□ -0.29
MMP28-206ENST00000616383 GTF2IP78347 998 aa13.22□□□□□ -0.29
MMP28-206ENST00000616383 MAP3K12Q12852 859 aa13.22□□□□□ -0.29
MMP28-206ENST00000616383 SLFNL1Q499Z3 407 aa13.22□□□□□ -0.29
MMP28-206ENST00000616383 PODNQ7Z5L7 613 aa13.22□□□□□ -0.29
MMP28-206ENST00000616383 LARGE2Q8N3Y3 721 aa13.22□□□□□ -0.29
MMP28-206ENST00000616383 RUFY2Q8WXA3 655 aa13.22□□□□□ -0.29
MMP28-206ENST00000616383 FBXW7Q969H0 707 aa13.22□□□□□ -0.29
MMP28-206ENST00000616383 IL25Q9H293 177 aa13.22□□□□□ -0.29
MMP28-206ENST00000616383 RAI14Q9P0K7 980 aa13.22□□□□□ -0.29
MMP28-206ENST00000616383 SGSM2O43147 1006 aa13.21□□□□□ -0.29
MMP28-206ENST00000616383 ADD2P35612 726 aa13.21□□□□□ -0.29
MMP28-206ENST00000616383 RASSF7Q02833 373 aa13.21□□□□□ -0.29
MMP28-206ENST00000616383 ZMYM1Q5SVZ6 1142 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms