RNA–Protein interactions for RNA: ENST00000616352.4

ACACA-238, Transcript of acetyl-CoA carboxylase alpha, human

TSL 1 (best)

Gene ACACA, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACACA-238	ENST00000616352	MECOM	Q03112	1051 aa		27.82	■■■□□ 2.04
ACACA-238	ENST00000616352	SLC9C2	Q5TAH2	1124 aa		27.82	■■■□□ 2.04
ACACA-238	ENST00000616352	ZC3H4	Q9UPT8	1303 aa	Known RBP	27.82	■■■□□ 2.04
ACACA-238	ENST00000616352	TCRBV5S4A2T	A0A5A2	114 aa		27.81	■■■□□ 2.04
ACACA-238	ENST00000616352	ZFY	P08048	801 aa	Predicted RBP	27.81	■■■□□ 2.04
ACACA-238	ENST00000616352	DCAF8L1	A6NGE4	600 aa		27.81	■■■□□ 2.04
ACACA-238	ENST00000616352	RNF113A	O15541	343 aa	Known RBP	27.81	■■■□□ 2.04
ACACA-238	ENST00000616352	CHML	P26374	656 aa		27.81	■■■□□ 2.04
ACACA-238	ENST00000616352	LRRFIP1	Q32MZ4	808 aa	Known RBP	27.81	■■■□□ 2.04
ACACA-238	ENST00000616352	ZSCAN25	Q6NSZ9	544 aa		27.81	■■■□□ 2.04
ACACA-238	ENST00000616352	TMED8	Q6PL24	325 aa	Predicted RBP	27.81	■■■□□ 2.04
ACACA-238	ENST00000616352	MAGEB6	Q8N7X4	407 aa		27.81	■■■□□ 2.04
ACACA-238	ENST00000616352	AGBL3	Q8NEM8	1001 aa		27.81	■■■□□ 2.04
ACACA-238	ENST00000616352	CDC45	O75419	566 aa		27.8	■■■□□ 2.04
ACACA-238	ENST00000616352	UBE3C	Q15386	1083 aa		27.8	■■■□□ 2.04
ACACA-238	ENST00000616352	SLFNL1	Q499Z3	407 aa		27.8	■■■□□ 2.04
ACACA-238	ENST00000616352	DZIP1	Q86YF9	867 aa	Known RBP	27.8	■■■□□ 2.04
ACACA-238	ENST00000616352	ZBTB12	Q9Y330	459 aa	Predicted RBP	27.8	■■■□□ 2.04
ACACA-238	ENST00000616352	CDK5RAP2	Q96SN8	1893 aa		27.8	■■■□□ 2.04
ACACA-238	ENST00000616352	HIP1	O00291	1037 aa		27.79	■■■□□ 2.04
ACACA-238	ENST00000616352	KIAA0825	Q8IV33	1275 aa		27.79	■■■□□ 2.04
ACACA-238	ENST00000616352	TTF2	Q9UNY4	1162 aa	Known RBP	27.79	■■■□□ 2.04
ACACA-238	ENST00000616352	ECM29	Q5VYK3	1845 aa		27.79	■■■□□ 2.04
ACACA-238	ENST00000616352	ZNF532	Q9HCE3	1301 aa		27.78	■■■□□ 2.04
ACACA-238	ENST00000616352	GPC2	Q8N158	579 aa		27.78	■■■□□ 2.04
ACACA-238	ENST00000616352	MAST3	O60307	1309 aa		27.78	■■■□□ 2.04
ACACA-238	ENST00000616352	NAA16	Q6N069	864 aa	Predicted RBP	27.78	■■■□□ 2.04
ACACA-238	ENST00000616352		F8W031	263 aa	Predicted RBP	27.77	■■■□□ 2.04
ACACA-238	ENST00000616352	RPS12	P25398	132 aa	Known RBP	27.77	■■■□□ 2.04
ACACA-238	ENST00000616352	ZMYM1	Q5SVZ6	1142 aa		27.77	■■■□□ 2.04
ACACA-238	ENST00000616352	ADGRA1	Q86SQ6	560 aa		27.77	■■■□□ 2.04
ACACA-238	ENST00000616352	FAM227B	Q96M60	508 aa		27.77	■■■□□ 2.04
ACACA-238	ENST00000616352	DIAPH3	Q9NSV4	1193 aa		27.77	■■■□□ 2.04
ACACA-238	ENST00000616352	GJA3	Q9Y6H8	435 aa		27.77	■■■□□ 2.04
ACACA-238	ENST00000616352	NMI	Q13287	307 aa	Predicted RBP	27.76	■■■□□ 2.03
ACACA-238	ENST00000616352	DIXDC1	Q155Q3	683 aa		27.76	■■■□□ 2.03
ACACA-238	ENST00000616352	APPBP2	Q92624	585 aa		27.76	■■■□□ 2.03
ACACA-238	ENST00000616352		A0A0D9SFI3	127 aa		27.75	■■■□□ 2.03
ACACA-238	ENST00000616352	CYP7A1	P22680	504 aa		27.75	■■■□□ 2.03
ACACA-238	ENST00000616352	GSTO1	P78417	241 aa		27.75	■■■□□ 2.03
ACACA-238	ENST00000616352	FAM163A	Q96GL9	167 aa	Predicted RBP	27.75	■■■□□ 2.03
ACACA-238	ENST00000616352	MRI	Q9BWK5	157 aa		27.75	■■■□□ 2.03
ACACA-238	ENST00000616352	FOCAD	Q5VW36	1801 aa		27.75	■■■□□ 2.03
ACACA-238	ENST00000616352	GAK	O14976	1311 aa		27.75	■■■□□ 2.03
ACACA-238	ENST00000616352	HDLBP	Q00341	1268 aa	Known RBP	27.74	■■■□□ 2.03
ACACA-238	ENST00000616352	CWC27	Q6UX04	472 aa	Known RBP	27.74	■■■□□ 2.03
ACACA-238	ENST00000616352	DPF2	Q92785	391 aa		27.74	■■■□□ 2.03
ACACA-238	ENST00000616352	OSBP2	Q969R2	916 aa		27.74	■■■□□ 2.03
ACACA-238	ENST00000616352	GMPS	P49915	693 aa	Predicted RBP	27.74	■■■□□ 2.03
ACACA-238	ENST00000616352	C8orf34	Q49A92	452 aa		27.74	■■■□□ 2.03
ACACA-238	ENST00000616352	MROH7-TTC4	A0A0A0MT08	1334 aa		27.73	■■■□□ 2.03
ACACA-238	ENST00000616352	USP17L8	P0C7I0	530 aa		27.73	■■■□□ 2.03
ACACA-238	ENST00000616352	SCNN1D	P51172	638 aa		27.73	■■■□□ 2.03
ACACA-238	ENST00000616352	SLF2	Q8IX21	1173 aa		27.73	■■■□□ 2.03
ACACA-238	ENST00000616352	SEC62	Q99442	399 aa	Known RBP	27.73	■■■□□ 2.03
ACACA-238	ENST00000616352	PUS7L	Q9H0K6	701 aa	Known RBP	27.73	■■■□□ 2.03
ACACA-238	ENST00000616352	IL25	Q9H293	177 aa		27.73	■■■□□ 2.03
ACACA-238	ENST00000616352	HELLS	Q9NRZ9	838 aa		27.73	■■■□□ 2.03
ACACA-238	ENST00000616352	SERPINA10	Q9UK55	444 aa		27.73	■■■□□ 2.03
ACACA-238	ENST00000616352	LDHC	P07864	332 aa		27.72	■■■□□ 2.03
ACACA-238	ENST00000616352	CASC1	Q6TDU7	716 aa		27.72	■■■□□ 2.03
ACACA-238	ENST00000616352	HHIPL2	Q6UWX4	724 aa		27.72	■■■□□ 2.03
ACACA-238	ENST00000616352	SCN4A	P35499	1836 aa		27.72	■■■□□ 2.03
ACACA-238	ENST00000616352	DDN	O94850	711 aa	Predicted RBP	27.71	■■■□□ 2.03
ACACA-238	ENST00000616352	MMP14	P50281	582 aa		27.71	■■■□□ 2.03
ACACA-238	ENST00000616352	TEKT1	Q969V4	418 aa		27.71	■■■□□ 2.03
ACACA-238	ENST00000616352	DAGLA	Q9Y4D2	1042 aa		27.71	■■■□□ 2.03
ACACA-238	ENST00000616352		M0R2C6	588 aa		27.7	■■■□□ 2.03
ACACA-238	ENST00000616352	CRK	P46108	304 aa		27.7	■■■□□ 2.03
ACACA-238	ENST00000616352	ZNF280A	P59817	542 aa	Predicted RBP	27.7	■■■□□ 2.03
ACACA-238	ENST00000616352	MCMDC2	Q4G0Z9	681 aa		27.7	■■■□□ 2.03
ACACA-238	ENST00000616352	RAD50	Q92878	1312 aa		27.7	■■■□□ 2.03
ACACA-238	ENST00000616352	WDR90	Q96KV7	1748 aa		27.7	■■■□□ 2.02
ACACA-238	ENST00000616352	SGSM2	O43147	1006 aa		27.7	■■■□□ 2.02
ACACA-238	ENST00000616352	OGFOD1	Q8N543	542 aa		27.7	■■■□□ 2.02
ACACA-238	ENST00000616352	RUFY2	Q8WXA3	655 aa		27.7	■■■□□ 2.02
ACACA-238	ENST00000616352	ZDHHC15	Q96MV8	337 aa		27.7	■■■□□ 2.02
ACACA-238	ENST00000616352	ESYT1	Q9BSJ8	1104 aa		27.7	■■■□□ 2.02
ACACA-238	ENST00000616352	HDAC9	Q9UKV0	1011 aa		27.7	■■■□□ 2.02
ACACA-238	ENST00000616352	GPR75-ASB3	A0A0A6YYF3	556 aa		27.69	■■■□□ 2.02
ACACA-238	ENST00000616352	SHTN1	A0MZ66	631 aa		27.69	■■■□□ 2.02
ACACA-238	ENST00000616352	GLTPD2	A6NH11	291 aa		27.69	■■■□□ 2.02
ACACA-238	ENST00000616352	DPY19L2	Q6NUT2	758 aa		27.69	■■■□□ 2.02
ACACA-238	ENST00000616352	MIGA1	Q8NAN2	632 aa		27.69	■■■□□ 2.02
ACACA-238	ENST00000616352	RIOK1	Q9BRS2	568 aa	Known RBP	27.69	■■■□□ 2.02
ACACA-238	ENST00000616352	ZNF589	Q86UQ0	364 aa	Predicted RBP	27.68	■■■□□ 2.02
ACACA-238	ENST00000616352	GPRC5D	Q9NZD1	345 aa		27.68	■■■□□ 2.02
ACACA-238	ENST00000616352	PPP4C	P60510	307 aa		27.67	■■■□□ 2.02
ACACA-238	ENST00000616352	MICALL2	Q8IY33	904 aa		27.67	■■■□□ 2.02
ACACA-238	ENST00000616352	L3MBTL3	Q96JM7	780 aa	Predicted RBP	27.67	■■■□□ 2.02
ACACA-238	ENST00000616352	CNOT7	Q9UIV1	285 aa	Known RBP	27.67	■■■□□ 2.02
ACACA-238	ENST00000616352	BAZ2A	Q9UIF9	1905 aa	Known RBP	27.67	■■■□□ 2.02
ACACA-238	ENST00000616352	CFAP100	Q494V2	611 aa		27.67	■■■□□ 2.02
ACACA-238	ENST00000616352	APOBEC3H	Q6NTF7	200 aa	Known RBP	27.67	■■■□□ 2.02
ACACA-238	ENST00000616352	CCDC129	Q6ZRS4	1044 aa		27.67	■■■□□ 2.02
ACACA-238	ENST00000616352	MTMR14	Q8NCE2	650 aa		27.67	■■■□□ 2.02
ACACA-238	ENST00000616352	AATF	Q9NY61	560 aa	Known RBP eCLIP	27.67	■■■□□ 2.02
ACACA-238	ENST00000616352	PCDHAC2	Q9Y5I4	1007 aa		27.67	■■■□□ 2.02
ACACA-238	ENST00000616352	MAGEB6P1	A0A0J9YX57	407 aa		27.66	■■■□□ 2.02
ACACA-238	ENST00000616352	GPAA1	O43292	621 aa		27.66	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms