RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 CDC37L1Q7L3B6 337 aa22.58■■□□□ 1.2
MMP28-204ENST00000615136 ARMT1Q9H993 441 aa22.58■■□□□ 1.2
MMP28-204ENST00000615136 ZNF213O14771 459 aa22.57■■□□□ 1.2
MMP28-204ENST00000615136 MBD4O95243 580 aa22.57■■□□□ 1.2
MMP28-204ENST00000615136 APPP05067 770 aa22.57■■□□□ 1.2
MMP28-204ENST00000615136 TBC1D10CQ8IV04 446 aa22.57■■□□□ 1.2
MMP28-204ENST00000615136 MB21D2Q8IYB1 491 aaPredicted RBP22.57■■□□□ 1.2
MMP28-204ENST00000615136 AIDAQ96BJ3 306 aa22.57■■□□□ 1.2
MMP28-204ENST00000615136 FAM84BQ96KN1 310 aaPredicted RBP22.57■■□□□ 1.2
MMP28-204ENST00000615136 EPB41L4AQ9HCS5 686 aaPredicted RBP22.57■■□□□ 1.2
MMP28-204ENST00000615136 PFKFB2O60825 505 aa22.57■■□□□ 1.2
MMP28-204ENST00000615136 ANTXR2P58335 489 aa22.57■■□□□ 1.2
MMP28-204ENST00000615136 UBE2HP62256 183 aa22.56■■□□□ 1.2
MMP28-204ENST00000615136 ADGRA1Q86SQ6 560 aa22.56■■□□□ 1.2
MMP28-204ENST00000615136 NCOA5Q9HCD5 579 aaKnown RBP22.56■■□□□ 1.2
MMP28-204ENST00000615136 CARMIL3Q8ND23 1372 aa22.55■■□□□ 1.2
MMP28-204ENST00000615136 PRKAB2O43741 272 aa22.55■■□□□ 1.2
MMP28-204ENST00000615136 CTDNEP1O95476 244 aa22.55■■□□□ 1.2
MMP28-204ENST00000615136 CCT2P78371 535 aaKnown RBP22.55■■□□□ 1.2
MMP28-204ENST00000615136 FERMT3Q86UX7 667 aa22.55■■□□□ 1.2
MMP28-204ENST00000615136 DDX11Q96FC9 970 aa22.55■■□□□ 1.2
MMP28-204ENST00000615136 LCORLQ8N3X6 602 aa22.55■■□□□ 1.2
MMP28-204ENST00000615136 TSPY26PQ9H489 355 aa22.55■■□□□ 1.2
MMP28-204ENST00000615136 LRP2BPQ9P2M1 347 aa22.55■■□□□ 1.2
MMP28-204ENST00000615136 NPHP1O15259 732 aa22.54■■□□□ 1.2
MMP28-204ENST00000615136 PPFIA3O75145 1194 aa22.54■■□□□ 1.2
MMP28-204ENST00000615136 PDIA3P30101 505 aaKnown RBP22.54■■□□□ 1.2
MMP28-204ENST00000615136 DNM1Q05193 864 aaKnown RBP22.54■■□□□ 1.2
MMP28-204ENST00000615136 HS1BP3Q53T59 392 aa22.54■■□□□ 1.2
MMP28-204ENST00000615136 PROM2Q8N271 834 aa22.54■■□□□ 1.2
MMP28-204ENST00000615136 MIGA1Q8NAN2 632 aa22.54■■□□□ 1.2
MMP28-204ENST00000615136 FBXO41Q8TF61 875 aa22.54■■□□□ 1.2
MMP28-204ENST00000615136 INCENPQ9NQS7 918 aa22.54■■□□□ 1.2
MMP28-204ENST00000615136 ABCF2Q9UG63 623 aa22.54■■□□□ 1.2
MMP28-204ENST00000615136 PRC1O43663 620 aa22.53■■□□□ 1.2
MMP28-204ENST00000615136 GYS1P13807 737 aa22.53■■□□□ 1.2
MMP28-204ENST00000615136 CSPP1Q1MSJ5 1256 aa22.53■■□□□ 1.2
MMP28-204ENST00000615136 FAM173BQ6P4H8 233 aa22.53■■□□□ 1.2
MMP28-204ENST00000615136 TFCP2L1Q9NZI6 479 aa22.53■■□□□ 1.2
MMP28-204ENST00000615136 TACC3Q9Y6A5 838 aa22.53■■□□□ 1.2
MMP28-204ENST00000615136 CCDC183Q5T5S1 534 aa22.53■■□□□ 1.2
MMP28-204ENST00000615136 NCOA7Q8NI08 942 aa22.53■■□□□ 1.2
MMP28-204ENST00000615136 NAP1L2Q9ULW6 460 aaPredicted RBP22.53■■□□□ 1.2
MMP28-204ENST00000615136 GSG1L2A8MUP6 293 aa22.52■■□□□ 1.2
MMP28-204ENST00000615136 PRR5LQ6MZQ0 368 aa22.52■■□□□ 1.2
MMP28-204ENST00000615136 TXNRD3Q86VQ6 643 aa22.52■■□□□ 1.2
MMP28-204ENST00000615136 IFNL3Q8IZI9 196 aa22.52■■□□□ 1.2
MMP28-204ENST00000615136 NSUN7Q8NE18 718 aaKnown RBP22.52■■□□□ 1.2
MMP28-204ENST00000615136 SMARCC2Q8TAQ2 1214 aa22.52■■□□□ 1.2
MMP28-204ENST00000615136 PATL2C9JE40 543 aaKnown RBP22.52■■□□□ 1.19
MMP28-204ENST00000615136 ADRA2BP18089 450 aa22.52■■□□□ 1.19
MMP28-204ENST00000615136 PDCP20941 246 aa22.52■■□□□ 1.19
MMP28-204ENST00000615136 CAVIN4Q5BKX8 364 aa22.52■■□□□ 1.19
MMP28-204ENST00000615136 CYB5R4Q7L1T6 521 aa22.52■■□□□ 1.19
MMP28-204ENST00000615136 FBXO33Q7Z6M2 555 aa22.52■■□□□ 1.19
MMP28-204ENST00000615136 KLHL34Q8N239 644 aa22.52■■□□□ 1.19
MMP28-204ENST00000615136 CNBD1Q8NA66 436 aa22.52■■□□□ 1.19
MMP28-204ENST00000615136 FIBPO43427 364 aa22.51■■□□□ 1.19
MMP28-204ENST00000615136 MCM5P33992 734 aa22.51■■□□□ 1.19
MMP28-204ENST00000615136 ZSCAN30Q86W11 494 aa22.51■■□□□ 1.19
MMP28-204ENST00000615136 FBXL16Q8N461 479 aa22.51■■□□□ 1.19
MMP28-204ENST00000615136 ZNF384Q8TF68 577 aa22.51■■□□□ 1.19
MMP28-204ENST00000615136 CACNA1SQ13698 1873 aa22.51■■□□□ 1.19
MMP28-204ENST00000615136 TPRNQ4KMQ1 711 aa22.5■■□□□ 1.19
MMP28-204ENST00000615136 VPS37DQ86XT2 251 aa22.5■■□□□ 1.19
MMP28-204ENST00000615136 RAB11FIP4Q86YS3 637 aa22.5■■□□□ 1.19
MMP28-204ENST00000615136 ZNF274Q96GC6 653 aaPredicted RBP22.5■■□□□ 1.19
MMP28-204ENST00000615136 GNL3LQ9NVN8 582 aaKnown RBP22.5■■□□□ 1.19
MMP28-204ENST00000615136 NEDD4P46934 1319 aa22.5■■□□□ 1.19
MMP28-204ENST00000615136 CYP7A1P22680 504 aa22.5■■□□□ 1.19
MMP28-204ENST00000615136 EVCP57679 992 aa22.5■■□□□ 1.19
MMP28-204ENST00000615136 CTDSPL2Q05D32 466 aa22.5■■□□□ 1.19
MMP28-204ENST00000615136 ALX1Q15699 326 aa22.5■■□□□ 1.19
MMP28-204ENST00000615136 SLC27A3Q5K4L6 730 aa22.5■■□□□ 1.19
MMP28-204ENST00000615136 RALYLQ86SE5 291 aaKnown RBP22.5■■□□□ 1.19
MMP28-204ENST00000615136 RAI14Q9P0K7 980 aa22.5■■□□□ 1.19
MMP28-204ENST00000615136 PTPDC1A2A3K4 754 aa22.49■■□□□ 1.19
MMP28-204ENST00000615136 LETM1O95202 739 aaPredicted RBP22.48■■□□□ 1.19
MMP28-204ENST00000615136 TXNRD1Q16881 649 aa22.48■■□□□ 1.19
MMP28-204ENST00000615136 SLC4A4Q9Y6R1 1079 aa22.48■■□□□ 1.19
MMP28-204ENST00000615136 IRS2Q9Y4H2 1338 aa22.48■■□□□ 1.19
MMP28-204ENST00000615136 B4E1Z4 1266 aa22.48■■□□□ 1.19
MMP28-204ENST00000615136 FOSBP53539 338 aa22.48■■□□□ 1.19
MMP28-204ENST00000615136 PNPLA7Q6ZV29 1317 aa22.48■■□□□ 1.19
MMP28-204ENST00000615136 LLPHQ9BRT6 129 aaKnown RBP22.48■■□□□ 1.19
MMP28-204ENST00000615136 ANKRD2Q9GZV1 360 aa22.48■■□□□ 1.19
MMP28-204ENST00000615136 NAPBQ9H115 298 aa22.48■■□□□ 1.19
MMP28-204ENST00000615136 SENP2Q9HC62 589 aa22.48■■□□□ 1.19
MMP28-204ENST00000615136 SALL1Q9NSC2 1324 aa22.48■■□□□ 1.19
MMP28-204ENST00000615136 HPS5Q9UPZ3 1129 aa22.48■■□□□ 1.19
MMP28-204ENST00000615136 FAM184AQ8NB25 1140 aa22.47■■□□□ 1.19
MMP28-204ENST00000615136 ZMYM6O95789 1325 aa22.47■■□□□ 1.19
MMP28-204ENST00000615136 KLF18A0A0U1RQI7 1052 aa22.47■■□□□ 1.19
MMP28-204ENST00000615136 JAG2Q9Y219 1238 aa22.47■■□□□ 1.19
MMP28-204ENST00000615136 SMIM22K7EJ46 135 aa22.46■■□□□ 1.19
MMP28-204ENST00000615136 SERPINB2P05120 415 aa22.46■■□□□ 1.19
MMP28-204ENST00000615136 HIBADHP31937 336 aaKnown RBP22.46■■□□□ 1.19
MMP28-204ENST00000615136 DDR1Q08345 913 aa22.46■■□□□ 1.19
MMP28-204ENST00000615136 GRAPQ13588 217 aa22.46■■□□□ 1.19
MMP28-204ENST00000615136 RNF214Q8ND24 703 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms