RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 COL4A1P02462 1669 aa23.16■■□□□ 1.3
SMARCD2-212ENST00000613943 NTSR2O95665 410 aa23.16■■□□□ 1.3
SMARCD2-212ENST00000613943 C17orf53Q8N3J3 647 aaPredicted RBP23.16■■□□□ 1.3
SMARCD2-212ENST00000613943 FBXL16Q8N461 479 aa23.16■■□□□ 1.3
SMARCD2-212ENST00000613943 SPC24Q8NBT2 197 aa23.16■■□□□ 1.3
SMARCD2-212ENST00000613943 ERCC4Q92889 916 aaPredicted RBP23.16■■□□□ 1.3
SMARCD2-212ENST00000613943 STRBPQ96SI9 672 aaKnown RBP23.16■■□□□ 1.3
SMARCD2-212ENST00000613943 EPB41L4AQ9HCS5 686 aaPredicted RBP23.16■■□□□ 1.3
SMARCD2-212ENST00000613943 ORC3Q9UBD5 711 aaPredicted RBP23.16■■□□□ 1.3
SMARCD2-212ENST00000613943 KIF3AQ9Y496 699 aa23.16■■□□□ 1.3
SMARCD2-212ENST00000613943 COL22A1Q8NFW1 1626 aaPredicted RBP23.16■■□□□ 1.3
SMARCD2-212ENST00000613943 MYH7P12883 1935 aa23.16■■□□□ 1.3
SMARCD2-212ENST00000613943 MYH14Q7Z406 1995 aaKnown RBP23.15■■□□□ 1.3
SMARCD2-212ENST00000613943 CPLX1O14810 134 aa23.15■■□□□ 1.3
SMARCD2-212ENST00000613943 PRKAB2O43741 272 aa23.15■■□□□ 1.3
SMARCD2-212ENST00000613943 MBD4O95243 580 aa23.15■■□□□ 1.3
SMARCD2-212ENST00000613943 UQCRFS1P1P0C7P4 283 aa23.15■■□□□ 1.3
SMARCD2-212ENST00000613943 TRDNQ13061 729 aa23.15■■□□□ 1.3
SMARCD2-212ENST00000613943 CCAR1Q8IX12 1150 aaKnown RBP23.15■■□□□ 1.3
SMARCD2-212ENST00000613943 MYL10Q9BUA6 226 aa23.15■■□□□ 1.3
SMARCD2-212ENST00000613943 WNK3Q9BYP7 1800 aa23.15■■□□□ 1.3
SMARCD2-212ENST00000613943 OFD1O75665 1012 aa23.15■■□□□ 1.3
SMARCD2-212ENST00000613943 CTDSPL2Q05D32 466 aa23.15■■□□□ 1.3
SMARCD2-212ENST00000613943 C3orf67Q6ZVT6 689 aa23.15■■□□□ 1.3
SMARCD2-212ENST00000613943 PTF1AQ7RTS3 328 aa23.15■■□□□ 1.3
SMARCD2-212ENST00000613943 FAM200AQ8TCP9 573 aa23.15■■□□□ 1.3
SMARCD2-212ENST00000613943 SPATA31A5Q5VU36 1347 aa23.14■■□□□ 1.3
SMARCD2-212ENST00000613943 SPATA31A7Q8IWB4 1347 aa23.14■■□□□ 1.3
SMARCD2-212ENST00000613943 ME1P48163 572 aa23.14■■□□□ 1.3
SMARCD2-212ENST00000613943 BICDL1Q6ZP65 573 aa23.14■■□□□ 1.3
SMARCD2-212ENST00000613943 C8orf76Q96K31 380 aa23.14■■□□□ 1.3
SMARCD2-212ENST00000613943 DNAJC25Q9H1X3 360 aa23.14■■□□□ 1.3
SMARCD2-212ENST00000613943 RCOR1Q9UKL0 485 aa23.14■■□□□ 1.3
SMARCD2-212ENST00000613943 TACC3Q9Y6A5 838 aa23.14■■□□□ 1.3
SMARCD2-212ENST00000613943 CDCA7Q9BWT1 371 aaPredicted RBP23.14■■□□□ 1.29
SMARCD2-212ENST00000613943 CBX8Q9HC52 389 aa23.14■■□□□ 1.29
SMARCD2-212ENST00000613943 LRP5O75197 1615 aa23.13■■□□□ 1.29
SMARCD2-212ENST00000613943 FAM98CQ17RN3 349 aaKnown RBP23.13■■□□□ 1.29
SMARCD2-212ENST00000613943 CCDC152Q4G0S7 254 aa23.13■■□□□ 1.29
SMARCD2-212ENST00000613943 MICU3Q86XE3 530 aa23.13■■□□□ 1.29
SMARCD2-212ENST00000613943 MIGA1Q8NAN2 632 aa23.13■■□□□ 1.29
SMARCD2-212ENST00000613943 THRAP3Q9Y2W1 955 aaKnown RBP23.13■■□□□ 1.29
SMARCD2-212ENST00000613943 ATRNO75882 1429 aa23.13■■□□□ 1.29
SMARCD2-212ENST00000613943 KIF28PB7ZC32 967 aa23.13■■□□□ 1.29
SMARCD2-212ENST00000613943 UBE2Q2LH0YL09 131 aa23.13■■□□□ 1.29
SMARCD2-212ENST00000613943 CHRNDQ07001 517 aa23.13■■□□□ 1.29
SMARCD2-212ENST00000613943 R3HCC1Q9Y3T6 440 aaKnown RBP23.13■■□□□ 1.29
SMARCD2-212ENST00000613943 CLIC4Q9Y696 253 aa23.13■■□□□ 1.29
SMARCD2-212ENST00000613943 IGHMBP2P38935 993 aaKnown RBP23.12■■□□□ 1.29
SMARCD2-212ENST00000613943 PHKBQ93100 1093 aa23.12■■□□□ 1.29
SMARCD2-212ENST00000613943 ANGEL1Q9UNK9 670 aaKnown RBP23.12■■□□□ 1.29
SMARCD2-212ENST00000613943 RBM43Q6ZSC3 357 aaKnown RBP23.11■■□□□ 1.29
SMARCD2-212ENST00000613943 CDC27P30260 824 aa23.11■■□□□ 1.29
SMARCD2-212ENST00000613943 MAP3K12Q12852 859 aa23.11■■□□□ 1.29
SMARCD2-212ENST00000613943 IFNL3Q8IZI9 196 aa23.11■■□□□ 1.29
SMARCD2-212ENST00000613943 LCORLQ8N3X6 602 aa23.11■■□□□ 1.29
SMARCD2-212ENST00000613943 SH2B2O14492 632 aaPredicted RBP23.1■■□□□ 1.29
SMARCD2-212ENST00000613943 SNW1Q13573 536 aaKnown RBP23.1■■□□□ 1.29
SMARCD2-212ENST00000613943 ERFEQ4G0M1 354 aa23.1■■□□□ 1.29
SMARCD2-212ENST00000613943 PARP10Q53GL7 1025 aa23.1■■□□□ 1.29
SMARCD2-212ENST00000613943 SASS6Q6UVJ0 657 aa23.1■■□□□ 1.29
SMARCD2-212ENST00000613943 LINC00116Q8NCU8 138 aa23.1■■□□□ 1.29
SMARCD2-212ENST00000613943 FBXW7Q969H0 707 aa23.1■■□□□ 1.29
SMARCD2-212ENST00000613943 ZNF396Q96N95 335 aaPredicted RBP23.1■■□□□ 1.29
SMARCD2-212ENST00000613943 NAPBQ9H115 298 aa23.1■■□□□ 1.29
SMARCD2-212ENST00000613943 FBXO18Q8NFZ0 1043 aa23.1■■□□□ 1.29
SMARCD2-212ENST00000613943 AK7Q96M32 723 aa23.1■■□□□ 1.29
SMARCD2-212ENST00000613943 DHX16O60231 1041 aaKnown RBP23.09■■□□□ 1.29
SMARCD2-212ENST00000613943 METAP2P50579 478 aaKnown RBP eCLIP23.09■■□□□ 1.29
SMARCD2-212ENST00000613943 FSIP1Q8NA03 581 aa23.09■■□□□ 1.29
SMARCD2-212ENST00000613943 ZKSCAN3Q9BRR0 538 aa23.09■■□□□ 1.29
SMARCD2-212ENST00000613943 PCDHA7Q9UN72 937 aa23.09■■□□□ 1.29
SMARCD2-212ENST00000613943 NRAPQ86VF7 1730 aa23.09■■□□□ 1.29
SMARCD2-212ENST00000613943 GYG1P46976 350 aa23.09■■□□□ 1.29
SMARCD2-212ENST00000613943 RRP12Q5JTH9 1297 aaKnown RBP23.09■■□□□ 1.29
SMARCD2-212ENST00000613943 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.09■■□□□ 1.29
SMARCD2-212ENST00000613943 CCDC24Q8N4L8 307 aa23.09■■□□□ 1.29
SMARCD2-212ENST00000613943 A0A1B0GVL5 298 aa23.08■■□□□ 1.29
SMARCD2-212ENST00000613943 PATL2C9JE40 543 aaKnown RBP23.08■■□□□ 1.29
SMARCD2-212ENST00000613943 SMIM22K7EJ46 135 aa23.08■■□□□ 1.29
SMARCD2-212ENST00000613943 APOA5Q6Q788 366 aa23.08■■□□□ 1.29
SMARCD2-212ENST00000613943 NFXL1Q6ZNB6 911 aa23.08■■□□□ 1.29
SMARCD2-212ENST00000613943 GSG1L2A8MUP6 293 aa23.08■■□□□ 1.28
SMARCD2-212ENST00000613943 ZNF165P49910 485 aa23.08■■□□□ 1.28
SMARCD2-212ENST00000613943 ADGRA1Q86SQ6 560 aa23.08■■□□□ 1.28
SMARCD2-212ENST00000613943 TOMM22Q9NS69 142 aa23.08■■□□□ 1.28
SMARCD2-212ENST00000613943 ABCF2Q9UG63 623 aa23.08■■□□□ 1.28
SMARCD2-212ENST00000613943 KIAA2012Q0VF49 1180 aa23.07■■□□□ 1.28
SMARCD2-212ENST00000613943 C11orf57Q6ZUT1 292 aaPredicted RBP23.07■■□□□ 1.28
SMARCD2-212ENST00000613943 IGDCC4Q8TDY8 1250 aa23.07■■□□□ 1.28
SMARCD2-212ENST00000613943 ZSWIM5Q9P217 1185 aa23.07■■□□□ 1.28
SMARCD2-212ENST00000613943 LRP2BPQ9P2M1 347 aa23.07■■□□□ 1.28
SMARCD2-212ENST00000613943 DDX60Q8IY21 1712 aaKnown RBP23.07■■□□□ 1.28
SMARCD2-212ENST00000613943 FAM182BQ5T319 152 aa23.07■■□□□ 1.28
SMARCD2-212ENST00000613943 CCDC73Q6ZRK6 1079 aa23.07■■□□□ 1.28
SMARCD2-212ENST00000613943 LY9Q9HBG7 655 aa23.07■■□□□ 1.28
SMARCD2-212ENST00000613943 ZMYM6O95789 1325 aa23.06■■□□□ 1.28
SMARCD2-212ENST00000613943 TMEM67Q5HYA8 995 aa23.06■■□□□ 1.28
SMARCD2-212ENST00000613943 KCNF1Q9H3M0 494 aa23.06■■□□□ 1.28
SMARCD2-212ENST00000613943 SLC4A4Q9Y6R1 1079 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms