RNA–Protein interactions for RNA: ENST00000613296.4

ALMS1-206, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,925 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-206ENST00000613296 KIF1BPQ96EK5 621 aa9.37□□□□□ -0.91
ALMS1-206ENST00000613296 HSP90AA5PQ58FG0 334 aa9.36□□□□□ -0.91
ALMS1-206ENST00000613296 HEATR3Q7Z4Q2 680 aa9.36□□□□□ -0.91
ALMS1-206ENST00000613296 IFIT5Q13325 482 aaKnown RBP9.36□□□□□ -0.91
ALMS1-206ENST00000613296 RAPGEF1Q13905 1077 aa9.36□□□□□ -0.91
ALMS1-206ENST00000613296 FRMD3A2A2Y4 597 aa9.36□□□□□ -0.91
ALMS1-206ENST00000613296 E9PMD0 336 aa9.36□□□□□ -0.91
ALMS1-206ENST00000613296 DAPK3O43293 454 aa9.36□□□□□ -0.91
ALMS1-206ENST00000613296 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.36□□□□□ -0.91
ALMS1-206ENST00000613296 ANKRD20A3Q5VUR7 823 aa9.36□□□□□ -0.91
ALMS1-206ENST00000613296 PLCB1Q9NQ66 1216 aa9.36□□□□□ -0.91
ALMS1-206ENST00000613296 DENND2CQ68D51 928 aa9.36□□□□□ -0.91
ALMS1-206ENST00000613296 TAF7Q15545 349 aaPredicted RBP9.36□□□□□ -0.91
ALMS1-206ENST00000613296 CUX1P39880 1505 aa9.36□□□□□ -0.91
ALMS1-206ENST00000613296 NXNQ6DKJ4 435 aa9.36□□□□□ -0.91
ALMS1-206ENST00000613296 CNGA4Q8IV77 575 aa9.36□□□□□ -0.91
ALMS1-206ENST00000613296 SLC12A2P55011 1212 aa9.36□□□□□ -0.91
ALMS1-206ENST00000613296 ANKRD30BQ9BXX2 1392 aa9.36□□□□□ -0.91
ALMS1-206ENST00000613296 LIN9Q5TKA1 542 aa9.36□□□□□ -0.91
ALMS1-206ENST00000613296 CCDC124Q96CT7 223 aaKnown RBP9.36□□□□□ -0.91
ALMS1-206ENST00000613296 TTLL3Q9Y4R7 772 aa9.36□□□□□ -0.91
ALMS1-206ENST00000613296 FAM71BQ8TC56 605 aa9.36□□□□□ -0.91
ALMS1-206ENST00000613296 CASP2P42575 452 aa9.35□□□□□ -0.91
ALMS1-206ENST00000613296 ANKRD35Q8N283 1001 aa9.35□□□□□ -0.91
ALMS1-206ENST00000613296 PAWRQ96IZ0 340 aaKnown RBP9.35□□□□□ -0.91
ALMS1-206ENST00000613296 NACA2Q9H009 215 aa9.35□□□□□ -0.91
ALMS1-206ENST00000613296 SOGA1O94964 1423 aa9.35□□□□□ -0.91
ALMS1-206ENST00000613296 TSPY2A6NKD2 308 aa9.35□□□□□ -0.91
ALMS1-206ENST00000613296 CHMP6Q96FZ7 201 aa9.35□□□□□ -0.91
ALMS1-206ENST00000613296 PLS1Q14651 629 aa9.35□□□□□ -0.91
ALMS1-206ENST00000613296 NUDCD3Q8IVD9 361 aa9.35□□□□□ -0.91
ALMS1-206ENST00000613296 IFT20Q8IY31 132 aa9.35□□□□□ -0.91
ALMS1-206ENST00000613296 MRPS27Q92552 414 aaKnown RBP9.35□□□□□ -0.91
ALMS1-206ENST00000613296 USP16Q9Y5T5 823 aa9.35□□□□□ -0.91
ALMS1-206ENST00000613296 ZBBXA8MT70 800 aa9.35□□□□□ -0.91
ALMS1-206ENST00000613296 PPP1R12AO14974 1030 aaPredicted RBP9.35□□□□□ -0.91
ALMS1-206ENST00000613296 IGSF3O75054 1194 aa9.35□□□□□ -0.91
ALMS1-206ENST00000613296 RABEP2Q9H5N1 569 aa9.35□□□□□ -0.91
ALMS1-206ENST00000613296 PALMDQ9NP74 551 aa9.35□□□□□ -0.91
ALMS1-206ENST00000613296 CTTNBP2NLQ9P2B4 639 aa9.35□□□□□ -0.91
ALMS1-206ENST00000613296 KRT9P35527 623 aa9.35□□□□□ -0.91
ALMS1-206ENST00000613296 WDR44Q5JSH3 913 aa9.35□□□□□ -0.91
ALMS1-206ENST00000613296 IWS1Q96ST2 819 aa9.35□□□□□ -0.91
ALMS1-206ENST00000613296 CABP5Q9NP86 173 aa9.35□□□□□ -0.91
ALMS1-206ENST00000613296 STARD3NLO95772 234 aa9.35□□□□□ -0.91
ALMS1-206ENST00000613296 DCAF17Q5H9S7 520 aaPredicted RBP9.35□□□□□ -0.91
ALMS1-206ENST00000613296 GIMAP6Q6P9H5 292 aa9.35□□□□□ -0.91
ALMS1-206ENST00000613296 BAIAP2L1Q9UHR4 511 aa9.35□□□□□ -0.91
ALMS1-206ENST00000613296 KRT15P19012 456 aa9.35□□□□□ -0.91
ALMS1-206ENST00000613296 BIRC3Q13489 604 aa9.35□□□□□ -0.91
ALMS1-206ENST00000613296 LMNAP02545 664 aaKnown RBP9.35□□□□□ -0.91
ALMS1-206ENST00000613296 MAN1A1P33908 653 aa9.35□□□□□ -0.91
ALMS1-206ENST00000613296 SKOR1P84550 965 aa9.35□□□□□ -0.91
ALMS1-206ENST00000613296 ORC3Q9UBD5 711 aaPredicted RBP9.35□□□□□ -0.91
ALMS1-206ENST00000613296 GSTA1P08263 222 aa9.34□□□□□ -0.91
ALMS1-206ENST00000613296 GSTA2P09210 222 aa9.34□□□□□ -0.91
ALMS1-206ENST00000613296 ESYT2A0FGR8 921 aa9.34□□□□□ -0.91
ALMS1-206ENST00000613296 HMGB2P26583 209 aaKnown RBP9.34□□□□□ -0.91
ALMS1-206ENST00000613296 IL1RL1Q01638 556 aa9.34□□□□□ -0.91
ALMS1-206ENST00000613296 USP6NLQ92738 828 aa9.34□□□□□ -0.91
ALMS1-206ENST00000613296 ASIC3Q9UHC3 531 aa9.34□□□□□ -0.91
ALMS1-206ENST00000613296 RAD51AP2Q09MP3 1159 aa9.34□□□□□ -0.91
ALMS1-206ENST00000613296 CDCA7LQ96GN5 454 aa9.34□□□□□ -0.91
ALMS1-206ENST00000613296 ADAMTS2O95450 1211 aa9.34□□□□□ -0.91
ALMS1-206ENST00000613296 LGSNQ5TDP6 509 aa9.34□□□□□ -0.91
ALMS1-206ENST00000613296 MGARPQ8TDB4 240 aa9.34□□□□□ -0.91
ALMS1-206ENST00000613296 CABS1Q96KC9 395 aa9.34□□□□□ -0.91
ALMS1-206ENST00000613296 BOLA2Q9H3K6 86 aa9.34□□□□□ -0.91
ALMS1-206ENST00000613296 ZSCAN16Q9H4T2 348 aaPredicted RBP9.34□□□□□ -0.91
ALMS1-206ENST00000613296 CCDC68Q9H2F9 335 aa9.34□□□□□ -0.91
ALMS1-206ENST00000613296 EFCC1Q9HA90 598 aa9.34□□□□□ -0.91
ALMS1-206ENST00000613296 BAG3O95817 575 aa9.34□□□□□ -0.91
ALMS1-206ENST00000613296 NBPF7P0C2Y1 421 aaPredicted RBP9.34□□□□□ -0.91
ALMS1-206ENST00000613296 MTMR3Q13615 1198 aa9.34□□□□□ -0.91
ALMS1-206ENST00000613296 KMT5BQ4FZB7 885 aa9.34□□□□□ -0.91
ALMS1-206ENST00000613296 HS2ST1Q7LGA3 356 aa9.34□□□□□ -0.91
ALMS1-206ENST00000613296 MIS18AQ9NYP9 233 aa9.34□□□□□ -0.91
ALMS1-206ENST00000613296 LARSQ9P2J5 1176 aaKnown RBP9.34□□□□□ -0.91
ALMS1-206ENST00000613296 CLEC11AQ9Y240 323 aa9.34□□□□□ -0.91
ALMS1-206ENST00000613296 POLD1P28340 1107 aa9.34□□□□□ -0.91
ALMS1-206ENST00000613296 RUFY4Q6ZNE9 571 aa9.34□□□□□ -0.91
ALMS1-206ENST00000613296 TRIM31Q9BZY9 425 aa9.34□□□□□ -0.91
ALMS1-206ENST00000613296 NUCKS1Q9H1E3 243 aaKnown RBP9.34□□□□□ -0.91
ALMS1-206ENST00000613296 TFIP11Q9UBB9 837 aaKnown RBP9.34□□□□□ -0.91
ALMS1-206ENST00000613296 TDRD9Q8NDG6 1382 aaKnown RBP9.34□□□□□ -0.91
ALMS1-206ENST00000613296 B4DLN1 442 aa9.34□□□□□ -0.91
ALMS1-206ENST00000613296 SLC8A1P32418 973 aa9.34□□□□□ -0.91
ALMS1-206ENST00000613296 MRPL12P52815 198 aaKnown RBP9.34□□□□□ -0.91
ALMS1-206ENST00000613296 FAM69CQ0P6D2 419 aa9.34□□□□□ -0.91
ALMS1-206ENST00000613296 PYGLP06737 847 aa9.34□□□□□ -0.91
ALMS1-206ENST00000613296 EEF1DP29692 281 aaKnown RBP9.34□□□□□ -0.91
ALMS1-206ENST00000613296 ATP6V1AP38606 617 aa9.34□□□□□ -0.91
ALMS1-206ENST00000613296 CCDC186Q7Z3E2 898 aa9.33□□□□□ -0.92
ALMS1-206ENST00000613296 DHX29Q7Z478 1369 aaKnown RBP9.33□□□□□ -0.92
ALMS1-206ENST00000613296 ARHGEF9O43307 516 aa9.33□□□□□ -0.92
ALMS1-206ENST00000613296 RPGRIP1Q96KN7 1286 aa9.33□□□□□ -0.92
ALMS1-206ENST00000613296 TROVE2P10155 538 aaKnown RBP eCLIP9.33□□□□□ -0.92
ALMS1-206ENST00000613296 PCYT1AP49585 367 aa9.33□□□□□ -0.92
ALMS1-206ENST00000613296 NSMCE1Q8WV22 266 aa9.33□□□□□ -0.92
ALMS1-206ENST00000613296 SFMBT1Q9UHJ3 866 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 184.6 ms