RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 SERPINA10Q9UK55 444 aa21.89■■□□□ 1.09
CSNK1E-215ENST00000612795 TCP10L2B9ZVM9 353 aa21.88■■□□□ 1.09
CSNK1E-215ENST00000612795 KIF22Q14807 665 aa21.88■■□□□ 1.09
CSNK1E-215ENST00000612795 CDAN1Q8IWY9 1227 aa21.88■■□□□ 1.09
CSNK1E-215ENST00000612795 CNNM1Q9NRU3 951 aa21.88■■□□□ 1.09
CSNK1E-215ENST00000612795 FAM205AQ6ZU69 1335 aa21.87■■□□□ 1.09
CSNK1E-215ENST00000612795 MAP3K9P80192 1104 aa21.87■■□□□ 1.09
CSNK1E-215ENST00000612795 FOXO4P98177 505 aa21.87■■□□□ 1.09
CSNK1E-215ENST00000612795 FAM43AQ8N2R8 423 aa21.87■■□□□ 1.09
CSNK1E-215ENST00000612795 TMEM39BQ9GZU3 492 aa21.87■■□□□ 1.09
CSNK1E-215ENST00000612795 CCDC57Q2TAC2 916 aa21.86■■□□□ 1.09
CSNK1E-215ENST00000612795 LDHAL6AQ6ZMR3 332 aa21.86■■□□□ 1.09
CSNK1E-215ENST00000612795 DZIP1LQ8IYY4 767 aaKnown RBP21.86■■□□□ 1.09
CSNK1E-215ENST00000612795 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.86■■□□□ 1.09
CSNK1E-215ENST00000612795 SH3TC2Q8TF17 1288 aa21.86■■□□□ 1.09
CSNK1E-215ENST00000612795 TEPSINQ96N21 525 aa21.86■■□□□ 1.09
CSNK1E-215ENST00000612795 H0YGN5 161 aa21.85■■□□□ 1.09
CSNK1E-215ENST00000612795 LMBR1LQ6UX01 489 aa21.85■■□□□ 1.09
CSNK1E-215ENST00000612795 ZNF594Q96JF6 807 aaPredicted RBP21.85■■□□□ 1.09
CSNK1E-215ENST00000612795 MYH13Q9UKX3 1938 aa21.84■■□□□ 1.09
CSNK1E-215ENST00000612795 CRKP46108 304 aa21.84■■□□□ 1.09
CSNK1E-215ENST00000612795 TDRD7Q8NHU6 1098 aaKnown RBP21.84■■□□□ 1.09
CSNK1E-215ENST00000612795 ARHGAP39Q9C0H5 1083 aa21.84■■□□□ 1.09
CSNK1E-215ENST00000612795 AK9Q5TCS8 1911 aa21.83■■□□□ 1.09
CSNK1E-215ENST00000612795 TLR2O60603 784 aa21.83■■□□□ 1.09
CSNK1E-215ENST00000612795 CETPP11597 493 aa21.83■■□□□ 1.09
CSNK1E-215ENST00000612795 GYG1P46976 350 aa21.83■■□□□ 1.09
CSNK1E-215ENST00000612795 LACTBP83111 547 aaPredicted RBP21.83■■□□□ 1.09
CSNK1E-215ENST00000612795 SPDYE5A6NIY4 337 aa21.82■■□□□ 1.08
CSNK1E-215ENST00000612795 HIBADHP31937 336 aaKnown RBP21.82■■□□□ 1.08
CSNK1E-215ENST00000612795 GNRH1P01148 92 aa21.81■■□□□ 1.08
CSNK1E-215ENST00000612795 CHRDL2Q6WN34 429 aa21.81■■□□□ 1.08
CSNK1E-215ENST00000612795 WWC1Q8IX03 1113 aa21.81■■□□□ 1.08
CSNK1E-215ENST00000612795 ZCCHC17Q9NP64 241 aaKnown RBP21.81■■□□□ 1.08
CSNK1E-215ENST00000612795 MGAMO43451 1857 aa21.8■■□□□ 1.08
CSNK1E-215ENST00000612795 F6X3S4 739 aa21.8■■□□□ 1.08
CSNK1E-215ENST00000612795 ECM2O94769 699 aaPredicted RBP21.8■■□□□ 1.08
CSNK1E-215ENST00000612795 PRMT2P55345 433 aa21.8■■□□□ 1.08
CSNK1E-215ENST00000612795 SNAPC2Q13487 334 aa21.8■■□□□ 1.08
CSNK1E-215ENST00000612795 UBE4AQ14139 1066 aa21.8■■□□□ 1.08
CSNK1E-215ENST00000612795 CCDC27Q2M243 656 aa21.8■■□□□ 1.08
CSNK1E-215ENST00000612795 ERO1BQ86YB8 467 aa21.8■■□□□ 1.08
CSNK1E-215ENST00000612795 WRNIP1Q96S55 665 aa21.8■■□□□ 1.08
CSNK1E-215ENST00000612795 TMOD2Q9NZR1 351 aa21.8■■□□□ 1.08
CSNK1E-215ENST00000612795 SNCAIPQ9Y6H5 919 aa21.8■■□□□ 1.08
CSNK1E-215ENST00000612795 BTBD19C9JJ37 291 aa21.79■■□□□ 1.08
CSNK1E-215ENST00000612795 EPHA10Q5JZY3 1008 aa21.79■■□□□ 1.08
CSNK1E-215ENST00000612795 VPS37DQ86XT2 251 aa21.79■■□□□ 1.08
CSNK1E-215ENST00000612795 DPF3Q92784 378 aa21.79■■□□□ 1.08
CSNK1E-215ENST00000612795 IL16Q14005 1332 aa21.79■■□□□ 1.08
CSNK1E-215ENST00000612795 FANCIQ9NVI1 1328 aa21.79■■□□□ 1.08
CSNK1E-215ENST00000612795 GRM8O00222 908 aa21.78■■□□□ 1.08
CSNK1E-215ENST00000612795 CACNB3P54284 484 aa21.78■■□□□ 1.08
CSNK1E-215ENST00000612795 BEND3Q5T5X7 828 aa21.78■■□□□ 1.08
CSNK1E-215ENST00000612795 HOOK2Q96ED9 719 aa21.78■■□□□ 1.08
CSNK1E-215ENST00000612795 FAM84BQ96KN1 310 aaPredicted RBP21.78■■□□□ 1.08
CSNK1E-215ENST00000612795 SZT2Q5T011 3432 aa21.78■■□□□ 1.08
CSNK1E-215ENST00000612795 IRF6O14896 467 aa21.77■■□□□ 1.08
CSNK1E-215ENST00000612795 FRAT2O75474 233 aaPredicted RBP21.77■■□□□ 1.08
CSNK1E-215ENST00000612795 CHAF1AQ13111 956 aaPredicted RBP21.77■■□□□ 1.08
CSNK1E-215ENST00000612795 PPIL2Q13356 520 aa21.77■■□□□ 1.08
CSNK1E-215ENST00000612795 ZKSCAN4Q969J2 545 aaPredicted RBP21.77■■□□□ 1.08
CSNK1E-215ENST00000612795 TEKT1Q969V4 418 aa21.77■■□□□ 1.08
CSNK1E-215ENST00000612795 C9orf78Q9NZ63 289 aaPredicted RBP21.77■■□□□ 1.08
CSNK1E-215ENST00000612795 IQSEC3Q9UPP2 1182 aaPredicted RBP21.77■■□□□ 1.08
CSNK1E-215ENST00000612795 SHISA4Q96DD7 197 aa21.76■■□□□ 1.07
CSNK1E-215ENST00000612795 HDLBPQ00341 1268 aaKnown RBP21.75■■□□□ 1.07
CSNK1E-215ENST00000612795 MTFR1Q15390 333 aa21.75■■□□□ 1.07
CSNK1E-215ENST00000612795 GRIK5Q16478 980 aa21.75■■□□□ 1.07
CSNK1E-215ENST00000612795 NKX2-3Q8TAU0 364 aa21.75■■□□□ 1.07
CSNK1E-215ENST00000612795 RAET1EQ8TD07 263 aa21.75■■□□□ 1.07
CSNK1E-215ENST00000612795 TBC1D22AQ8WUA7 517 aa21.75■■□□□ 1.07
CSNK1E-215ENST00000612795 CPA4Q9UI42 421 aa21.75■■□□□ 1.07
CSNK1E-215ENST00000612795 DCAF15Q66K64 600 aa21.74■■□□□ 1.07
CSNK1E-215ENST00000612795 RBM27Q9P2N5 1060 aaKnown RBP21.74■■□□□ 1.07
CSNK1E-215ENST00000612795 SRRDQ9UH36 339 aa21.74■■□□□ 1.07
CSNK1E-215ENST00000612795 RPAP1Q9BWH6 1393 aaPredicted RBP21.74■■□□□ 1.07
CSNK1E-215ENST00000612795 VAMP4O75379 141 aa21.73■■□□□ 1.07
CSNK1E-215ENST00000612795 HOXD10P28358 340 aa21.73■■□□□ 1.07
CSNK1E-215ENST00000612795 PSMC4P43686 418 aa21.73■■□□□ 1.07
CSNK1E-215ENST00000612795 FAM83AQ86UY5 434 aa21.73■■□□□ 1.07
CSNK1E-215ENST00000612795 HTATIP2Q9BUP3 242 aa21.73■■□□□ 1.07
CSNK1E-215ENST00000612795 PUS3Q9BZE2 481 aaKnown RBP21.73■■□□□ 1.07
CSNK1E-215ENST00000612795 MAST3O60307 1309 aa21.73■■□□□ 1.07
CSNK1E-215ENST00000612795 MROH5Q6ZUA9 1318 aa21.73■■□□□ 1.07
CSNK1E-215ENST00000612795 FMNL1O95466 1100 aaPredicted RBP21.72■■□□□ 1.07
CSNK1E-215ENST00000612795 GRK4P32298 578 aa21.72■■□□□ 1.07
CSNK1E-215ENST00000612795 PPATQ06203 517 aa21.72■■□□□ 1.07
CSNK1E-215ENST00000612795 CAVIN4Q5BKX8 364 aa21.72■■□□□ 1.07
CSNK1E-215ENST00000612795 C17orf99Q6UX52 265 aa21.72■■□□□ 1.07
CSNK1E-215ENST00000612795 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.72■■□□□ 1.07
CSNK1E-215ENST00000612795 TRIM47Q96LD4 638 aa21.72■■□□□ 1.07
CSNK1E-215ENST00000612795 ZDHHC15Q96MV8 337 aa21.72■■□□□ 1.07
CSNK1E-215ENST00000612795 ZNF341Q9BYN7 854 aa21.72■■□□□ 1.07
CSNK1E-215ENST00000612795 MYPNQ86TC9 1320 aa21.72■■□□□ 1.07
CSNK1E-215ENST00000612795 OSBPP22059 807 aa21.71■■□□□ 1.07
CSNK1E-215ENST00000612795 EXOSC9Q06265 439 aaKnown RBP21.71■■□□□ 1.07
CSNK1E-215ENST00000612795 BIN2Q9UBW5 565 aaPredicted RBP21.71■■□□□ 1.07
CSNK1E-215ENST00000612795 RIPOR2Q9Y4F9 1068 aa21.71■■□□□ 1.07
CSNK1E-215ENST00000612795 DOCK2Q92608 1830 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms