RNA–Protein interactions for RNA: ENST00000612399.4

PSMC6-219, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC6, Length 1,590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-219ENST00000612399 FOXD4L4Q8WXT5 416 aaPredicted RBP7.55□□□□□ -1.2
PSMC6-219ENST00000612399 KCNB2Q92953 911 aa7.55□□□□□ -1.2
PSMC6-219ENST00000612399 SLC26A8Q96RN1 970 aa7.55□□□□□ -1.2
PSMC6-219ENST00000612399 UPF3BQ9BZI7 483 aaKnown RBP7.55□□□□□ -1.2
PSMC6-219ENST00000612399 SCAND2PQ9GZW5 306 aaPredicted RBP7.55□□□□□ -1.2
PSMC6-219ENST00000612399 TTC12Q9H892 705 aaPredicted RBP7.55□□□□□ -1.2
PSMC6-219ENST00000612399 PGPEP1Q9NXJ5 209 aa7.55□□□□□ -1.2
PSMC6-219ENST00000612399 SNX14Q9Y5W7 946 aa7.55□□□□□ -1.2
PSMC6-219ENST00000612399 NPHP3Q7Z494 1330 aa7.55□□□□□ -1.2
PSMC6-219ENST00000612399 KIF2AO00139 706 aaPredicted RBP7.54□□□□□ -1.2
PSMC6-219ENST00000612399 SPINT1O43278 529 aa7.54□□□□□ -1.2
PSMC6-219ENST00000612399 UBTFL1P0CB47 393 aaPredicted RBP7.54□□□□□ -1.2
PSMC6-219ENST00000612399 AK2P54819 239 aa7.54□□□□□ -1.2
PSMC6-219ENST00000612399 RRS1Q15050 365 aaKnown RBP7.54□□□□□ -1.2
PSMC6-219ENST00000612399 RNF20Q5VTR2 975 aa7.54□□□□□ -1.2
PSMC6-219ENST00000612399 RBM43Q6ZSC3 357 aaKnown RBP7.54□□□□□ -1.2
PSMC6-219ENST00000612399 SV2AQ7L0J3 742 aa7.54□□□□□ -1.2
PSMC6-219ENST00000612399 WHAMMQ8TF30 809 aa7.54□□□□□ -1.2
PSMC6-219ENST00000612399 GPATCH3Q96I76 525 aa7.54□□□□□ -1.2
PSMC6-219ENST00000612399 KRTAP4-8Q9BYQ9 185 aa7.54□□□□□ -1.2
PSMC6-219ENST00000612399 LSG1Q9H089 658 aaKnown RBP7.54□□□□□ -1.2
PSMC6-219ENST00000612399 NUP62CLQ9H1M0 184 aa7.54□□□□□ -1.2
PSMC6-219ENST00000612399 ALDH8A1Q9H2A2 487 aaPredicted RBP7.54□□□□□ -1.2
PSMC6-219ENST00000612399 SOCS7O14512 581 aa7.54□□□□□ -1.2
PSMC6-219ENST00000612399 FIBPO43427 364 aa7.54□□□□□ -1.2
PSMC6-219ENST00000612399 GLRX3O76003 335 aaKnown RBP7.54□□□□□ -1.2
PSMC6-219ENST00000612399 HOXB7P09629 217 aa7.54□□□□□ -1.2
PSMC6-219ENST00000612399 ITGA6P23229 1130 aa7.54□□□□□ -1.2
PSMC6-219ENST00000612399 PSMA5P28066 241 aa7.54□□□□□ -1.2
PSMC6-219ENST00000612399 KRT24Q2M2I5 525 aa7.54□□□□□ -1.2
PSMC6-219ENST00000612399 Q6ZVU0 165 aa7.54□□□□□ -1.2
PSMC6-219ENST00000612399 MCM10Q7L590 875 aa7.54□□□□□ -1.2
PSMC6-219ENST00000612399 SH3BP5LQ7L8J4 393 aa7.54□□□□□ -1.2
PSMC6-219ENST00000612399 PI4K2BQ8TCG2 481 aa7.54□□□□□ -1.2
PSMC6-219ENST00000612399 KCNF1Q9H3M0 494 aa7.54□□□□□ -1.2
PSMC6-219ENST00000612399 GDPD2Q9HCC8 539 aa7.54□□□□□ -1.2
PSMC6-219ENST00000612399 HYPKQ9NX55 129 aa7.54□□□□□ -1.2
PSMC6-219ENST00000612399 MTMR6Q9Y217 621 aa7.54□□□□□ -1.2
PSMC6-219ENST00000612399 CYP46A1Q9Y6A2 500 aa7.54□□□□□ -1.2
PSMC6-219ENST00000612399 TMEM94Q12767 1356 aa7.54□□□□□ -1.2
PSMC6-219ENST00000612399 NWD1Q149M9 1564 aa7.54□□□□□ -1.2
PSMC6-219ENST00000612399 IGSF1Q8N6C5 1336 aa7.53□□□□□ -1.2
PSMC6-219ENST00000612399 PNMA6EA0A0J9YXQ4 647 aa7.53□□□□□ -1.2
PSMC6-219ENST00000612399 GIGYF1O75420 1035 aaPredicted RBP7.53□□□□□ -1.2
PSMC6-219ENST00000612399 TUBB4AP04350 444 aa7.53□□□□□ -1.2
PSMC6-219ENST00000612399 ZKSCAN1P17029 563 aaPredicted RBP7.53□□□□□ -1.2
PSMC6-219ENST00000612399 KCNA6P17658 529 aa7.53□□□□□ -1.2
PSMC6-219ENST00000612399 GJB2P29033 226 aa7.53□□□□□ -1.2
PSMC6-219ENST00000612399 NOL8Q76FK4 1167 aaKnown RBP7.53□□□□□ -1.2
PSMC6-219ENST00000612399 RUFY3Q7L099 469 aa7.53□□□□□ -1.2
PSMC6-219ENST00000612399 RIC3Q7Z5B4 369 aa7.53□□□□□ -1.2
PSMC6-219ENST00000612399 WAPLQ7Z5K2 1190 aa7.53□□□□□ -1.2
PSMC6-219ENST00000612399 ERC1Q8IUD2 1116 aa7.53□□□□□ -1.2
PSMC6-219ENST00000612399 TDRD7Q8NHU6 1098 aaKnown RBP7.53□□□□□ -1.2
PSMC6-219ENST00000612399 RHPN1Q8TCX5 695 aa7.53□□□□□ -1.2
PSMC6-219ENST00000612399 CHAMP1Q96JM3 812 aa7.53□□□□□ -1.2
PSMC6-219ENST00000612399 LRRFIP2Q9Y608 721 aaKnown RBP7.53□□□□□ -1.2
PSMC6-219ENST00000612399 KDM3BQ7LBC6 1761 aa7.52□□□□□ -1.2
PSMC6-219ENST00000612399 PLEKHG1Q9ULL1 1385 aa7.52□□□□□ -1.21
PSMC6-219ENST00000612399 CCDC66A2RUB6 948 aa7.52□□□□□ -1.21
PSMC6-219ENST00000612399 CDC14CA4D256 554 aa7.52□□□□□ -1.21
PSMC6-219ENST00000612399 F6X3S4 739 aa7.52□□□□□ -1.21
PSMC6-219ENST00000612399 CTAGE5O15320 804 aa7.52□□□□□ -1.21
PSMC6-219ENST00000612399 FBLN1P23142 703 aa7.52□□□□□ -1.21
PSMC6-219ENST00000612399 CBX1P83916 185 aa7.52□□□□□ -1.21
PSMC6-219ENST00000612399 MTX1Q13505 466 aa7.52□□□□□ -1.21
PSMC6-219ENST00000612399 SLFNL1Q499Z3 407 aa7.52□□□□□ -1.21
PSMC6-219ENST00000612399 SARM1Q6SZW1 724 aa7.52□□□□□ -1.21
PSMC6-219ENST00000612399 G2E3Q7L622 706 aa7.52□□□□□ -1.21
PSMC6-219ENST00000612399 PLA2G4DQ86XP0 818 aa7.52□□□□□ -1.21
PSMC6-219ENST00000612399 VWA5B2Q8N398 1253 aa7.52□□□□□ -1.21
PSMC6-219ENST00000612399 CCDC112Q8NEF3 446 aa7.52□□□□□ -1.21
PSMC6-219ENST00000612399 CABLES1Q8TDN4 633 aa7.52□□□□□ -1.21
PSMC6-219ENST00000612399 GPKOWQ92917 476 aaPredicted RBP eCLIP7.52□□□□□ -1.214e-7■■■■■ 29.5
PSMC6-219ENST00000612399 ZNF830Q96NB3 372 aaPredicted RBP7.52□□□□□ -1.21
PSMC6-219ENST00000612399 TNMDQ9H2S6 317 aa7.52□□□□□ -1.21
PSMC6-219ENST00000612399 SNRKQ9NRH2 765 aa7.52□□□□□ -1.21
PSMC6-219ENST00000612399 KCND1Q9NSA2 647 aa7.52□□□□□ -1.21
PSMC6-219ENST00000612399 PDRG1Q9NUG6 133 aa7.52□□□□□ -1.21
PSMC6-219ENST00000612399 MAGEB6P1A0A0J9YX57 407 aa7.51□□□□□ -1.21
PSMC6-219ENST00000612399 GOLGA6L4A6NEF3 574 aa7.51□□□□□ -1.21
PSMC6-219ENST00000612399 CASTP20810 708 aaKnown RBP7.51□□□□□ -1.21
PSMC6-219ENST00000612399 DNM1Q05193 864 aaKnown RBP7.51□□□□□ -1.21
PSMC6-219ENST00000612399 TYRO3Q06418 890 aa7.51□□□□□ -1.21
PSMC6-219ENST00000612399 NCBP1Q09161 790 aaKnown RBP7.51□□□□□ -1.21
PSMC6-219ENST00000612399 ATP2B3Q16720 1220 aa7.51□□□□□ -1.21
PSMC6-219ENST00000612399 PPP1R26Q5T8A7 1209 aaPredicted RBP7.51□□□□□ -1.21
PSMC6-219ENST00000612399 GIMAP6Q6P9H5 292 aa7.51□□□□□ -1.21
PSMC6-219ENST00000612399 BARGINQ6ZT62 677 aa7.51□□□□□ -1.21
PSMC6-219ENST00000612399 PROSER2Q86WR7 435 aaPredicted RBP7.51□□□□□ -1.21
PSMC6-219ENST00000612399 MRFAP1L1Q96HT8 127 aa7.51□□□□□ -1.21
PSMC6-219ENST00000612399 USP44Q9H0E7 712 aa7.51□□□□□ -1.21
PSMC6-219ENST00000612399 CLSTN2Q9H4D0 955 aa7.51□□□□□ -1.21
PSMC6-219ENST00000612399 HMG20BQ9P0W2 317 aa7.51□□□□□ -1.21
PSMC6-219ENST00000612399 PYCARDQ9ULZ3 195 aa7.51□□□□□ -1.21
PSMC6-219ENST00000612399 MRVI1Q9Y6F6 885 aa7.51□□□□□ -1.21
PSMC6-219ENST00000612399 MAP3K19Q56UN5 1328 aa7.51□□□□□ -1.21
PSMC6-219ENST00000612399 METP08581 1390 aa7.51□□□□□ -1.21
PSMC6-219ENST00000612399 RFX7Q2KHR2 1363 aa7.51□□□□□ -1.21
PSMC6-219ENST00000612399 ROBO1Q9Y6N7 1651 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms