RNA–Protein interactions for RNA: ENST00000611917.1

FAM228B-207, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 3

Gene FAM228B, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-207ENST00000611917 CA12O43570 354 aa15.4■□□□□ 0.06
FAM228B-207ENST00000611917 SURF6O75683 361 aaKnown RBP15.4■□□□□ 0.06
FAM228B-207ENST00000611917 MVPQ14764 893 aaKnown RBP15.4■□□□□ 0.06
FAM228B-207ENST00000611917 HHIPL2Q6UWX4 724 aa15.4■□□□□ 0.06
FAM228B-207ENST00000611917 TMOD2Q9NZR1 351 aa15.4■□□□□ 0.06
FAM228B-207ENST00000611917 ZNF70Q9UC06 446 aaPredicted RBP15.4■□□□□ 0.06
FAM228B-207ENST00000611917 SPEF2Q9C093 1822 aa15.39■□□□□ 0.05
FAM228B-207ENST00000611917 PNMA6EA0A0J9YXQ4 647 aa15.39■□□□□ 0.05
FAM228B-207ENST00000611917 CLRN2A0PK11 232 aa15.39■□□□□ 0.05
FAM228B-207ENST00000611917 ZBTB22O15209 634 aa15.39■□□□□ 0.05
FAM228B-207ENST00000611917 SPTY2D1Q68D10 685 aaPredicted RBP15.39■□□□□ 0.05
FAM228B-207ENST00000611917 CCDC102BQ68D86 513 aa15.39■□□□□ 0.05
FAM228B-207ENST00000611917 SLF2Q8IX21 1173 aa15.39■□□□□ 0.05
FAM228B-207ENST00000611917 SSH3Q8TE77 659 aa15.39■□□□□ 0.05
FAM228B-207ENST00000611917 XAGE2Q96GT9 111 aa15.39■□□□□ 0.05
FAM228B-207ENST00000611917 TDRD3Q9H7E2 651 aaKnown RBP15.39■□□□□ 0.05
FAM228B-207ENST00000611917 PRDM10Q9NQV6 1147 aa15.39■□□□□ 0.05
FAM228B-207ENST00000611917 A0A1B0GUL7 405 aa15.38■□□□□ 0.05
FAM228B-207ENST00000611917 UNCXA6NJT0 531 aa15.38■□□□□ 0.05
FAM228B-207ENST00000611917 FOXN1O15353 648 aa15.38■□□□□ 0.05
FAM228B-207ENST00000611917 LDHBP07195 334 aaKnown RBP15.38■□□□□ 0.05
FAM228B-207ENST00000611917 RLBP1P12271 317 aa15.38■□□□□ 0.05
FAM228B-207ENST00000611917 POLA2Q14181 598 aa15.38■□□□□ 0.05
FAM228B-207ENST00000611917 RASA3Q14644 834 aa15.38■□□□□ 0.05
FAM228B-207ENST00000611917 SPDYE2Q495Y8 402 aa15.38■□□□□ 0.05
FAM228B-207ENST00000611917 PANK1Q8TE04 598 aa15.38■□□□□ 0.05
FAM228B-207ENST00000611917 SLC10A4Q96EP9 437 aa15.38■□□□□ 0.05
FAM228B-207ENST00000611917 ZDHHC15Q96MV8 337 aa15.38■□□□□ 0.05
FAM228B-207ENST00000611917 PHKA1P46020 1223 aa15.37■□□□□ 0.05
FAM228B-207ENST00000611917 KIF23Q02241 960 aaPredicted RBP15.37■□□□□ 0.05
FAM228B-207ENST00000611917 PRKG1Q13976 671 aa15.37■□□□□ 0.05
FAM228B-207ENST00000611917 HOOK2Q96ED9 719 aa15.37■□□□□ 0.05
FAM228B-207ENST00000611917 GPR108Q9NPR9 543 aa15.37■□□□□ 0.05
FAM228B-207ENST00000611917 DDX19BQ9UMR2 479 aa15.37■□□□□ 0.05
FAM228B-207ENST00000611917 ANGEL1Q9UNK9 670 aaKnown RBP15.37■□□□□ 0.05
FAM228B-207ENST00000611917 PCDHAC2Q9Y5I4 1007 aa15.37■□□□□ 0.05
FAM228B-207ENST00000611917 UQCRFS1P1P0C7P4 283 aa15.36■□□□□ 0.05
FAM228B-207ENST00000611917 IREB2P48200 963 aaKnown RBP15.36■□□□□ 0.05
FAM228B-207ENST00000611917 HSP90AB4PQ58FF6 505 aa15.36■□□□□ 0.05
FAM228B-207ENST00000611917 CCDC158Q5M9N0 1113 aa15.36■□□□□ 0.05
FAM228B-207ENST00000611917 COL13A1Q5TAT6 717 aaPredicted RBP15.36■□□□□ 0.05
FAM228B-207ENST00000611917 RPAP2Q8IXW5 612 aaPredicted RBP15.36■□□□□ 0.05
FAM228B-207ENST00000611917 NOP58Q9Y2X3 529 aaKnown RBP15.36■□□□□ 0.05
FAM228B-207ENST00000611917 FAM155AB1AL88 458 aaPredicted RBP15.35■□□□□ 0.05
FAM228B-207ENST00000611917 TCP10L2B9ZVM9 353 aa15.35■□□□□ 0.05
FAM228B-207ENST00000611917 SLC10A3P09131 477 aa15.35■□□□□ 0.05
FAM228B-207ENST00000611917 ADORA1P30542 326 aa15.35■□□□□ 0.05
FAM228B-207ENST00000611917 LBX1P52954 281 aa15.35■□□□□ 0.05
FAM228B-207ENST00000611917 GRIK5Q16478 980 aa15.35■□□□□ 0.05
FAM228B-207ENST00000611917 FKBP1CQ5VVH2 108 aa15.35■□□□□ 0.05
FAM228B-207ENST00000611917 MOB2Q70IA6 237 aa15.35■□□□□ 0.05
FAM228B-207ENST00000611917 C1orf115Q9H7X2 142 aa15.35■□□□□ 0.05
FAM228B-207ENST00000611917 ABCF2Q9UG63 623 aa15.35■□□□□ 0.05
FAM228B-207ENST00000611917 SALL1Q9NSC2 1324 aa15.35■□□□□ 0.05
FAM228B-207ENST00000611917 TRPM7Q96QT4 1865 aa15.35■□□□□ 0.05
FAM228B-207ENST00000611917 POLR2AP24928 1970 aaKnown RBP15.35■□□□□ 0.05
FAM228B-207ENST00000611917 HMMRO75330 724 aa15.34■□□□□ 0.05
FAM228B-207ENST00000611917 LDHCP07864 332 aa15.34■□□□□ 0.05
FAM228B-207ENST00000611917 PDE3AQ14432 1141 aa15.34■□□□□ 0.05
FAM228B-207ENST00000611917 LDLRAD1Q5T700 205 aa15.34■□□□□ 0.05
FAM228B-207ENST00000611917 NBPF12Q5TAG4 269 aaPredicted RBP15.34■□□□□ 0.05
FAM228B-207ENST00000611917 APOBEC3HQ6NTF7 200 aaKnown RBP15.34■□□□□ 0.05
FAM228B-207ENST00000611917 ERC1Q8IUD2 1116 aa15.34■□□□□ 0.05
FAM228B-207ENST00000611917 TNS4Q8IZW8 715 aa15.34■□□□□ 0.05
FAM228B-207ENST00000611917 CSRNP1Q96S65 589 aa15.34■□□□□ 0.05
FAM228B-207ENST00000611917 INHBEP58166 350 aa15.33■□□□□ 0.04
FAM228B-207ENST00000611917 MAP3K11Q16584 847 aa15.33■□□□□ 0.04
FAM228B-207ENST00000611917 IFFO2Q5TF58 517 aa15.33■□□□□ 0.04
FAM228B-207ENST00000611917 ERICH6Q7L0X2 663 aa15.33■□□□□ 0.04
FAM228B-207ENST00000611917 FAM83AQ86UY5 434 aa15.33■□□□□ 0.04
FAM228B-207ENST00000611917 USP40Q9NVE5 1235 aa15.33■□□□□ 0.04
FAM228B-207ENST00000611917 COG6Q9Y2V7 657 aa15.33■□□□□ 0.04
FAM228B-207ENST00000611917 PDS5AQ29RF7 1337 aaKnown RBP15.33■□□□□ 0.04
FAM228B-207ENST00000611917 PSME4Q14997 1843 aa15.33■□□□□ 0.04
FAM228B-207ENST00000611917 COL1A1P02452 1464 aaPredicted RBP15.33■□□□□ 0.04
FAM228B-207ENST00000611917 USP2O75604 605 aaPredicted RBP15.32■□□□□ 0.04
FAM228B-207ENST00000611917 HSPA8P11142 646 aaKnown RBP15.32■□□□□ 0.04
FAM228B-207ENST00000611917 GSTO1P78417 241 aa15.32■□□□□ 0.04
FAM228B-207ENST00000611917 TTC39AQ5SRH9 613 aa15.32■□□□□ 0.04
FAM228B-207ENST00000611917 CEP85Q6P2H3 762 aa15.32■□□□□ 0.04
FAM228B-207ENST00000611917 DZIP1Q86YF9 867 aaKnown RBP15.32■□□□□ 0.04
FAM228B-207ENST00000611917 SPATA5Q8NB90 893 aa15.32■□□□□ 0.04
FAM228B-207ENST00000611917 PRDX5P30044 214 aa15.31■□□□□ 0.04
FAM228B-207ENST00000611917 MAP3K9P80192 1104 aa15.31■□□□□ 0.04
FAM228B-207ENST00000611917 TNNI3KQ59H18 835 aa15.31■□□□□ 0.04
FAM228B-207ENST00000611917 RASAL3Q86YV0 1011 aa15.31■□□□□ 0.04
FAM228B-207ENST00000611917 ANKRD13AQ8IZ07 590 aa15.31■□□□□ 0.04
FAM228B-207ENST00000611917 FAM163AQ96GL9 167 aaPredicted RBP15.31■□□□□ 0.04
FAM228B-207ENST00000611917 ZIC5Q96T25 663 aa15.31■□□□□ 0.04
FAM228B-207ENST00000611917 ZBTB40Q9NUA8 1239 aa15.31■□□□□ 0.04
FAM228B-207ENST00000611917 SAGE1Q9NXZ1 904 aa15.31■□□□□ 0.04
FAM228B-207ENST00000611917 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.31■□□□□ 0.04
FAM228B-207ENST00000611917 FPGT-TNNI3KV9GXZ4 949 aa15.31■□□□□ 0.04
FAM228B-207ENST00000611917 IGSF3O75054 1194 aa15.3■□□□□ 0.04
FAM228B-207ENST00000611917 TRPA1O75762 1119 aa15.3■□□□□ 0.04
FAM228B-207ENST00000611917 TM4SF4P48230 202 aa15.3■□□□□ 0.04
FAM228B-207ENST00000611917 SREBF2Q12772 1141 aa15.3■□□□□ 0.04
FAM228B-207ENST00000611917 RASGRF1Q13972 1273 aa15.3■□□□□ 0.04
FAM228B-207ENST00000611917 FAM151AQ8WW52 585 aa15.3■□□□□ 0.04
FAM228B-207ENST00000611917 TMEM39BQ9GZU3 492 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms