RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 CACNB3P54284 484 aa16.8■□□□□ 0.28
HMGB1P24-201ENST00000611897 CRHR2Q13324 411 aa16.8■□□□□ 0.28
HMGB1P24-201ENST00000611897 GRIK5Q16478 980 aa16.8■□□□□ 0.28
HMGB1P24-201ENST00000611897 OTUD7BQ6GQQ9 843 aa16.8■□□□□ 0.28
HMGB1P24-201ENST00000611897 OTOP1Q7RTM1 612 aa16.8■□□□□ 0.28
HMGB1P24-201ENST00000611897 KLHDC4Q8TBB5 520 aa16.8■□□□□ 0.28
HMGB1P24-201ENST00000611897 CD99L2Q8TCZ2 262 aa16.8■□□□□ 0.28
HMGB1P24-201ENST00000611897 CNKSR2Q8WXI2 1034 aa16.8■□□□□ 0.28
HMGB1P24-201ENST00000611897 OPTNQ96CV9 577 aa16.8■□□□□ 0.28
HMGB1P24-201ENST00000611897 TMEM39BQ9GZU3 492 aa16.8■□□□□ 0.28
HMGB1P24-201ENST00000611897 MYH13Q9UKX3 1938 aa16.8■□□□□ 0.28
HMGB1P24-201ENST00000611897 TNNI2P48788 182 aa16.79■□□□□ 0.28
HMGB1P24-201ENST00000611897 CAVIN4Q5BKX8 364 aa16.79■□□□□ 0.28
HMGB1P24-201ENST00000611897 PRPF38BQ5VTL8 546 aaKnown RBP16.79■□□□□ 0.28
HMGB1P24-201ENST00000611897 RIPOR2Q9Y4F9 1068 aa16.79■□□□□ 0.28
HMGB1P24-201ENST00000611897 ANKRD44Q8N8A2 993 aa16.78■□□□□ 0.28
HMGB1P24-201ENST00000611897 OTUD5Q96G74 571 aa16.78■□□□□ 0.28
HMGB1P24-201ENST00000611897 ERO1AQ96HE7 468 aa16.78■□□□□ 0.28
HMGB1P24-201ENST00000611897 CSADQ9Y600 493 aa16.78■□□□□ 0.28
HMGB1P24-201ENST00000611897 CENPFP49454 3210 aa16.77■□□□□ 0.28
HMGB1P24-201ENST00000611897 ZEB1P37275 1124 aaPredicted RBP16.77■□□□□ 0.28
HMGB1P24-201ENST00000611897 VGLL4Q14135 290 aa16.77■□□□□ 0.28
HMGB1P24-201ENST00000611897 MRPL50Q8N5N7 158 aaKnown RBP16.77■□□□□ 0.28
HMGB1P24-201ENST00000611897 TEKT1Q969V4 418 aa16.77■□□□□ 0.28
HMGB1P24-201ENST00000611897 TMOD2Q9NZR1 351 aa16.77■□□□□ 0.28
HMGB1P24-201ENST00000611897 AK9Q5TCS8 1911 aa16.76■□□□□ 0.27
HMGB1P24-201ENST00000611897 UTYO14607 1347 aa16.76■□□□□ 0.27
HMGB1P24-201ENST00000611897 CCL15-CCL14A0A0B4J2E2 113 aa16.76■□□□□ 0.27
HMGB1P24-201ENST00000611897 BCAMP50895 628 aa16.76■□□□□ 0.27
HMGB1P24-201ENST00000611897 TAF1CQ15572 869 aaPredicted RBP16.76■□□□□ 0.27
HMGB1P24-201ENST00000611897 CCL15Q16663 113 aa16.76■□□□□ 0.27
HMGB1P24-201ENST00000611897 RABL6Q3YEC7 729 aaPredicted RBP16.76■□□□□ 0.27
HMGB1P24-201ENST00000611897 FBXO33Q7Z6M2 555 aa16.76■□□□□ 0.27
HMGB1P24-201ENST00000611897 TEPSINQ96N21 525 aa16.76■□□□□ 0.27
HMGB1P24-201ENST00000611897 PTPN18Q99952 460 aa16.76■□□□□ 0.27
HMGB1P24-201ENST00000611897 EFCC1Q9HA90 598 aa16.76■□□□□ 0.27
HMGB1P24-201ENST00000611897 UNCXA6NJT0 531 aa16.75■□□□□ 0.27
HMGB1P24-201ENST00000611897 PDE8BO95263 885 aa16.75■□□□□ 0.27
HMGB1P24-201ENST00000611897 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.75■□□□□ 0.27
HMGB1P24-201ENST00000611897 TBC1D22AQ8WUA7 517 aa16.75■□□□□ 0.27
HMGB1P24-201ENST00000611897 PTPRCP08575 1304 aa16.74■□□□□ 0.27
HMGB1P24-201ENST00000611897 POTEFA5A3E0 1075 aa16.74■□□□□ 0.27
HMGB1P24-201ENST00000611897 ECM2O94769 699 aaPredicted RBP16.74■□□□□ 0.27
HMGB1P24-201ENST00000611897 IFIT1P09914 478 aaKnown RBP16.74■□□□□ 0.27
HMGB1P24-201ENST00000611897 MAP3K9P80192 1104 aa16.74■□□□□ 0.27
HMGB1P24-201ENST00000611897 SP3Q02447 781 aa16.74■□□□□ 0.27
HMGB1P24-201ENST00000611897 PUM3Q15397 648 aaKnown RBP16.74■□□□□ 0.27
HMGB1P24-201ENST00000611897 BRI3BPQ8WY22 251 aa16.74■□□□□ 0.27
HMGB1P24-201ENST00000611897 SSH1Q8WYL5 1049 aa16.74■□□□□ 0.27
HMGB1P24-201ENST00000611897 WRNIP1Q96S55 665 aa16.74■□□□□ 0.27
HMGB1P24-201ENST00000611897 ZNF521Q96K83 1311 aa16.73■□□□□ 0.27
HMGB1P24-201ENST00000611897 VGLL2Q8N8G2 317 aa16.73■□□□□ 0.27
HMGB1P24-201ENST00000611897 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.73■□□□□ 0.27
HMGB1P24-201ENST00000611897 PTPN22Q9Y2R2 807 aa16.73■□□□□ 0.27
HMGB1P24-201ENST00000611897 MKI67P46013 3256 aaKnown RBP16.72■□□□□ 0.27
HMGB1P24-201ENST00000611897 MAST3O60307 1309 aa16.72■□□□□ 0.27
HMGB1P24-201ENST00000611897 MYCP01106 439 aaPredicted RBP16.72■□□□□ 0.27
HMGB1P24-201ENST00000611897 SLC5A1P13866 664 aa16.72■□□□□ 0.27
HMGB1P24-201ENST00000611897 GTF2A2P52657 109 aa16.72■□□□□ 0.27
HMGB1P24-201ENST00000611897 MS4A4AQ96JQ5 239 aa16.72■□□□□ 0.27
HMGB1P24-201ENST00000611897 SIL1Q9H173 461 aa16.72■□□□□ 0.27
HMGB1P24-201ENST00000611897 SMC4Q9NTJ3 1288 aa16.72■□□□□ 0.27
HMGB1P24-201ENST00000611897 ZSWIM8A7E2V4 1837 aa16.72■□□□□ 0.27
HMGB1P24-201ENST00000611897 TESPA1A2RU30 521 aaPredicted RBP16.71■□□□□ 0.27
HMGB1P24-201ENST00000611897 E9PSI1 815 aa16.71■□□□□ 0.27
HMGB1P24-201ENST00000611897 CAP1Q01518 475 aa16.71■□□□□ 0.27
HMGB1P24-201ENST00000611897 FAM43AQ8N2R8 423 aa16.71■□□□□ 0.27
HMGB1P24-201ENST00000611897 ZKSCAN4Q969J2 545 aaPredicted RBP16.71■□□□□ 0.27
HMGB1P24-201ENST00000611897 USP44Q9H0E7 712 aa16.71■□□□□ 0.27
HMGB1P24-201ENST00000611897 ZFYVE28Q9HCC9 887 aa16.71■□□□□ 0.27
HMGB1P24-201ENST00000611897 SNCAIPQ9Y6H5 919 aa16.71■□□□□ 0.27
HMGB1P24-201ENST00000611897 SPDYE5A6NIY4 337 aa16.7■□□□□ 0.26
HMGB1P24-201ENST00000611897 HDLBPQ00341 1268 aaKnown RBP16.7■□□□□ 0.26
HMGB1P24-201ENST00000611897 INTS3Q68E01 1043 aaKnown RBP16.7■□□□□ 0.26
HMGB1P24-201ENST00000611897 ZDHHC15Q96MV8 337 aa16.7■□□□□ 0.26
HMGB1P24-201ENST00000611897 EYA2O00167 538 aa16.69■□□□□ 0.26
HMGB1P24-201ENST00000611897 WDHD1O75717 1129 aaPredicted RBP16.69■□□□□ 0.26
HMGB1P24-201ENST00000611897 MIGA2Q7L4E1 593 aa16.69■□□□□ 0.26
HMGB1P24-201ENST00000611897 PTCH2Q9Y6C5 1203 aa16.69■□□□□ 0.26
HMGB1P24-201ENST00000611897 RBBP6Q7Z6E9 1792 aaKnown RBP16.69■□□□□ 0.26
HMGB1P24-201ENST00000611897 CETPP11597 493 aa16.68■□□□□ 0.26
HMGB1P24-201ENST00000611897 FGFR2P21802 821 aa16.68■□□□□ 0.26
HMGB1P24-201ENST00000611897 TCP10Q12799 353 aa16.68■□□□□ 0.26
HMGB1P24-201ENST00000611897 DIXDC1Q155Q3 683 aa16.68■□□□□ 0.26
HMGB1P24-201ENST00000611897 SLC9C1Q4G0N8 1177 aa16.68■□□□□ 0.26
HMGB1P24-201ENST00000611897 DCAF15Q66K64 600 aa16.68■□□□□ 0.26
HMGB1P24-201ENST00000611897 APOBEC3HQ6NTF7 200 aaKnown RBP16.68■□□□□ 0.26
HMGB1P24-201ENST00000611897 ERO1BQ86YB8 467 aa16.68■□□□□ 0.26
HMGB1P24-201ENST00000611897 CDCA7LQ96GN5 454 aa16.68■□□□□ 0.26
HMGB1P24-201ENST00000611897 BTBD19C9JJ37 291 aa16.67■□□□□ 0.26
HMGB1P24-201ENST00000611897 IRF6O14896 467 aa16.67■□□□□ 0.26
HMGB1P24-201ENST00000611897 UBTFL1P0CB47 393 aaPredicted RBP16.67■□□□□ 0.26
HMGB1P24-201ENST00000611897 EN2P19622 333 aaPredicted RBP16.67■□□□□ 0.26
HMGB1P24-201ENST00000611897 INPP5BP32019 993 aa16.67■□□□□ 0.26
HMGB1P24-201ENST00000611897 SNAPC2Q13487 334 aa16.67■□□□□ 0.26
HMGB1P24-201ENST00000611897 ARHGEF6Q15052 776 aa16.67■□□□□ 0.26
HMGB1P24-201ENST00000611897 ATP2B3Q16720 1220 aa16.67■□□□□ 0.26
HMGB1P24-201ENST00000611897 FAM83AQ86UY5 434 aa16.67■□□□□ 0.26
HMGB1P24-201ENST00000611897 WDR66Q8TBY9 1149 aa16.67■□□□□ 0.26
HMGB1P24-201ENST00000611897 LPIN2Q92539 896 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms