RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 BLZF1Q9H2G9 400 aa4.34□□□□□ -1.72
RNF38-210ENST00000611646 SAP30BPQ9UHR5 308 aaKnown RBP4.34□□□□□ -1.72
RNF38-210ENST00000611646 PRDM15P57071 1507 aaPredicted RBP4.34□□□□□ -1.72
RNF38-210ENST00000611646 NEURL1BA8MQ27 555 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 TSPY3P0CV98 308 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 TSPY8P0CW00 308 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 ADD1P35611 737 aaKnown RBP4.33□□□□□ -1.72
RNF38-210ENST00000611646 EIF6P56537 245 aaKnown RBP4.33□□□□□ -1.72
RNF38-210ENST00000611646 FANCCQ00597 558 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 SF3A3Q12874 501 aaKnown RBP eCLIP4.33□□□□□ -1.72
RNF38-210ENST00000611646 ANO1Q5XXA6 986 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 SMARCC1Q92922 1105 aaPredicted RBP4.33□□□□□ -1.72
RNF38-210ENST00000611646 DESI2Q9BSY9 194 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 PUS3Q9BZE2 481 aaKnown RBP4.33□□□□□ -1.72
RNF38-210ENST00000611646 XPO4Q9C0E2 1151 aaKnown RBP4.33□□□□□ -1.72
RNF38-210ENST00000611646 PRR36Q9H6K5 1346 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 MAGEB6P1A0A0J9YX57 407 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 EYA2O00167 538 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 GIGYF1O75420 1035 aaPredicted RBP4.33□□□□□ -1.72
RNF38-210ENST00000611646 EVCP57679 992 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 SCRN1Q12765 414 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 MTX1Q13505 466 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 ARID5BQ14865 1188 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 NAA16Q6N069 864 aaPredicted RBP4.33□□□□□ -1.72
RNF38-210ENST00000611646 ARFGAP3Q9NP61 516 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 GJB4Q9NTQ9 266 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 TCP11L1Q9NUJ3 509 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 CLIC4Q9Y696 253 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 ANKRD62A6NC57 917 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 TRIM75PA6NK02 468 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 NEFHP12036 1026 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 ASIC1P78348 528 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 PIK3AP1Q6ZUJ8 805 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 MAATS1Q7Z4T9 603 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 ESR2Q92731 530 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 BAG1Q99933 345 aaPredicted RBP4.33□□□□□ -1.72
RNF38-210ENST00000611646 KRT23Q9C075 422 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 SLC52A2Q9HAB3 445 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 EXOC1Q9NV70 894 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 MCM9Q9NXL9 1143 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 KCNH3Q9ULD8 1083 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 ZNF652Q9Y2D9 606 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 V9GY48 417 aaPredicted RBP4.33□□□□□ -1.72
RNF38-210ENST00000611646 AKR1B10O60218 316 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 ZFYP08048 801 aaPredicted RBP4.33□□□□□ -1.72
RNF38-210ENST00000611646 ADORA1P30542 326 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 CHMP4BP1P59074 171 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 PDE4BQ07343 736 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 C11orf57Q6ZUT1 292 aaPredicted RBP4.33□□□□□ -1.72
RNF38-210ENST00000611646 NBPF5PQ86XG9 351 aaPredicted RBP4.33□□□□□ -1.72
RNF38-210ENST00000611646 KBTBD3Q8NAB2 608 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 IPO4Q8TEX9 1081 aaKnown RBP4.33□□□□□ -1.72
RNF38-210ENST00000611646 DCAF5Q96JK2 942 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 GPHNQ9NQX3 736 aaPredicted RBP4.33□□□□□ -1.72
RNF38-210ENST00000611646 MRVI1Q9Y6F6 885 aa4.33□□□□□ -1.72
RNF38-210ENST00000611646 CTAGE15A4D2H0 777 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 CHGBP05060 677 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 CCDC175P0C221 793 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 CTAGE8P0CG41 777 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 NDUFA8P51970 172 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 MYL5Q02045 173 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 ERCC6LQ2NKX8 1250 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 CCDC152Q4G0S7 254 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 IQCEQ6IPM2 695 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 CTAGE6Q86UF2 777 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 CTAGE4Q8IX94 777 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 KRI1Q8N9T8 703 aaKnown RBP4.32□□□□□ -1.72
RNF38-210ENST00000611646 KIF2CQ99661 725 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 ZSWIM6Q9HCJ5 1215 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 TFCP2L1Q9NZI6 479 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 ZNF532Q9HCE3 1301 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 CAVIN2O95810 425 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 UQCRFS1P1P0C7P4 283 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 ZNF853P0CG23 659 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 IL2RBP14784 551 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 CAPN2P17655 700 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 KRT40Q6A162 431 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 ANKRD18AQ8IVF6 992 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 DIS3L2Q8IYB7 885 aaKnown RBP4.32□□□□□ -1.72
RNF38-210ENST00000611646 GPATCH11Q8N954 259 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 PLBD2Q8NHP8 589 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 CTNNBL1Q8WYA6 563 aaPredicted RBP4.32□□□□□ -1.72
RNF38-210ENST00000611646 RPGRQ92834 1020 aaKnown RBP4.32□□□□□ -1.72
RNF38-210ENST00000611646 CDC5LQ99459 802 aaKnown RBP4.32□□□□□ -1.72
RNF38-210ENST00000611646 TSG101Q99816 390 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 LUC7LQ9NQ29 371 aaKnown RBP4.32□□□□□ -1.72
RNF38-210ENST00000611646 HELLSQ9NRZ9 838 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 VPS54Q9P1Q0 977 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 DBNLQ9UJU6 430 aaKnown RBP4.32□□□□□ -1.72
RNF38-210ENST00000611646 CTAGE9A4FU28 777 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 VGLL3A8MV65 326 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 USO1O60763 962 aaKnown RBP4.32□□□□□ -1.72
RNF38-210ENST00000611646 KRT2P35908 639 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 NAPAP54920 295 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 PPP2R3AQ06190 1150 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 RAD51AP2Q09MP3 1159 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 IFFO1Q0D2I5 559 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 PLS1Q14651 629 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 PTPROQ16827 1216 aa4.32□□□□□ -1.72
RNF38-210ENST00000611646 FAM47AQ5JRC9 791 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms