RNA–Protein interactions for RNA: ENST00000611278.4

ZNF248-208, Transcript of zinc finger protein 248, humanhuman

TSL 1 (best) BASIC

Gene ZNF248, Length 4,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-208ENST00000611278 TRAF5O00463 557 aa10.37□□□□□ -0.75
ZNF248-208ENST00000611278 MAP3K9P80192 1104 aa10.37□□□□□ -0.75
ZNF248-208ENST00000611278 ZSCAN25Q6NSZ9 544 aa10.37□□□□□ -0.75
ZNF248-208ENST00000611278 SH2D4AQ9H788 454 aa10.37□□□□□ -0.75
ZNF248-208ENST00000611278 UBE2Q2LH0YL09 131 aa10.37□□□□□ -0.75
ZNF248-208ENST00000611278 GNAI2P04899 355 aa10.37□□□□□ -0.75
ZNF248-208ENST00000611278 ZKSCAN2Q63HK3 967 aa10.37□□□□□ -0.75
ZNF248-208ENST00000611278 PHAXQ9H814 394 aaKnown RBP10.37□□□□□ -0.75
ZNF248-208ENST00000611278 VIL1P09327 827 aaKnown RBP10.36□□□□□ -0.75
ZNF248-208ENST00000611278 ALDH1L2Q3SY69 923 aa10.36□□□□□ -0.75
ZNF248-208ENST00000611278 PPP4R3BQ5MIZ7 849 aa10.36□□□□□ -0.75
ZNF248-208ENST00000611278 SASH1O94885 1247 aa10.36□□□□□ -0.75
ZNF248-208ENST00000611278 USP5P45974 858 aa10.36□□□□□ -0.75
ZNF248-208ENST00000611278 JARID2Q92833 1246 aaPredicted RBP10.36□□□□□ -0.75
ZNF248-208ENST00000611278 CD209Q9NNX6 404 aa10.36□□□□□ -0.75
ZNF248-208ENST00000611278 SEC31BQ9NQW1 1179 aa10.36□□□□□ -0.75
ZNF248-208ENST00000611278 CLRN2A0PK11 232 aa10.36□□□□□ -0.75
ZNF248-208ENST00000611278 IFIT2P09913 472 aaKnown RBP10.36□□□□□ -0.75
ZNF248-208ENST00000611278 SLC9C1Q4G0N8 1177 aa10.36□□□□□ -0.75
ZNF248-208ENST00000611278 ITPRIPQ8IWB1 547 aa10.36□□□□□ -0.75
ZNF248-208ENST00000611278 MINPP1Q9UNW1 487 aa10.36□□□□□ -0.75
ZNF248-208ENST00000611278 KCNH4Q9UQ05 1017 aa10.36□□□□□ -0.75
ZNF248-208ENST00000611278 TCP10L2B9ZVM9 353 aa10.35□□□□□ -0.75
ZNF248-208ENST00000611278 PROSER3Q2NL68 480 aa10.35□□□□□ -0.75
ZNF248-208ENST00000611278 CWF19L2Q2TBE0 894 aaKnown RBP10.35□□□□□ -0.75
ZNF248-208ENST00000611278 LPIN2Q92539 896 aa10.35□□□□□ -0.75
ZNF248-208ENST00000611278 PLEKHF1Q96S99 279 aa10.35□□□□□ -0.75
ZNF248-208ENST00000611278 MAP4K4O95819 1239 aaPredicted RBP10.35□□□□□ -0.75
ZNF248-208ENST00000611278 TRIM47Q96LD4 638 aa10.35□□□□□ -0.75
ZNF248-208ENST00000611278 GREM2Q9H772 168 aa10.35□□□□□ -0.75
ZNF248-208ENST00000611278 RBM27Q9P2N5 1060 aaKnown RBP10.35□□□□□ -0.75
ZNF248-208ENST00000611278 UBN2Q6ZU65 1347 aa10.35□□□□□ -0.75
ZNF248-208ENST00000611278 KDM3BQ7LBC6 1761 aa10.35□□□□□ -0.75
ZNF248-208ENST00000611278 CCL15-CCL14A0A0B4J2E2 113 aa10.34□□□□□ -0.75
ZNF248-208ENST00000611278 RAD21O60216 631 aa10.34□□□□□ -0.75
ZNF248-208ENST00000611278 HDLBPQ00341 1268 aaKnown RBP10.34□□□□□ -0.75
ZNF248-208ENST00000611278 CCL15Q16663 113 aa10.34□□□□□ -0.75
ZNF248-208ENST00000611278 PRPF38BQ5VTL8 546 aaKnown RBP10.34□□□□□ -0.75
ZNF248-208ENST00000611278 GTF3C2Q8WUA4 911 aaPredicted RBP10.34□□□□□ -0.75
ZNF248-208ENST00000611278 MPHOSPH6Q99547 160 aaKnown RBP10.34□□□□□ -0.75
ZNF248-208ENST00000611278 GNRH1P01148 92 aa10.34□□□□□ -0.75
ZNF248-208ENST00000611278 ZBTB48P10074 688 aaPredicted RBP10.34□□□□□ -0.75
ZNF248-208ENST00000611278 FCGRTP55899 365 aa10.34□□□□□ -0.75
ZNF248-208ENST00000611278 MAP3K12Q12852 859 aa10.34□□□□□ -0.75
ZNF248-208ENST00000611278 C8orf58Q8NAV2 365 aa10.34□□□□□ -0.75
ZNF248-208ENST00000611278 TTLL11Q8NHH1 800 aa10.34□□□□□ -0.75
ZNF248-208ENST00000611278 COL4A5P29400 1685 aa10.34□□□□□ -0.75
ZNF248-208ENST00000611278 FKBP1AP62942 108 aaKnown RBP10.34□□□□□ -0.75
ZNF248-208ENST00000611278 GADL1Q6ZQY3 521 aa10.34□□□□□ -0.75
ZNF248-208ENST00000611278 DEFB129Q9H1M3 183 aa10.34□□□□□ -0.75
ZNF248-208ENST00000611278 BRPF3Q9ULD4 1205 aa10.34□□□□□ -0.75
ZNF248-208ENST00000611278 ADM5C9JUS6 153 aa10.34□□□□□ -0.75
ZNF248-208ENST00000611278 FBXO46Q6PJ61 603 aaPredicted RBP10.34□□□□□ -0.75
ZNF248-208ENST00000611278 TBC1D2Q9BYX2 928 aa10.34□□□□□ -0.75
ZNF248-208ENST00000611278 ANKRD36CQ5JPF3 1778 aa10.33□□□□□ -0.76
ZNF248-208ENST00000611278 SP3Q02447 781 aa10.33□□□□□ -0.76
ZNF248-208ENST00000611278 SIL1Q9H173 461 aa10.33□□□□□ -0.76
ZNF248-208ENST00000611278 TSKSQ9UJT2 592 aa10.33□□□□□ -0.76
ZNF248-208ENST00000611278 POLR3DP05423 398 aaPredicted RBP10.33□□□□□ -0.76
ZNF248-208ENST00000611278 CLASRPQ8N2M8 674 aaKnown RBP10.33□□□□□ -0.76
ZNF248-208ENST00000611278 DPF3Q92784 378 aa10.33□□□□□ -0.76
ZNF248-208ENST00000611278 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.33□□□□□ -0.76
ZNF248-208ENST00000611278 IGSF3O75054 1194 aa10.33□□□□□ -0.76
ZNF248-208ENST00000611278 TTC6Q86TZ1 520 aa10.33□□□□□ -0.76
ZNF248-208ENST00000611278 CASP8AP2Q9UKL3 1982 aa10.33□□□□□ -0.76
ZNF248-208ENST00000611278 ERO1BQ86YB8 467 aa10.32□□□□□ -0.76
ZNF248-208ENST00000611278 PLA2G12BQ9BX93 195 aa10.32□□□□□ -0.76
ZNF248-208ENST00000611278 SERPINA10Q9UK55 444 aa10.32□□□□□ -0.76
ZNF248-208ENST00000611278 DDX60Q8IY21 1712 aaKnown RBP10.32□□□□□ -0.76
ZNF248-208ENST00000611278 EYA2O00167 538 aa10.32□□□□□ -0.76
ZNF248-208ENST00000611278 CCDC174Q6PII3 467 aa10.32□□□□□ -0.76
ZNF248-208ENST00000611278 TRPM4Q8TD43 1214 aa10.32□□□□□ -0.76
ZNF248-208ENST00000611278 FMR1Q06787 632 aaKnown RBP eCLIP10.32□□□□□ -0.76
ZNF248-208ENST00000611278 TTF1Q15361 905 aaPredicted RBP10.32□□□□□ -0.76
ZNF248-208ENST00000611278 KRT24Q2M2I5 525 aa10.32□□□□□ -0.76
ZNF248-208ENST00000611278 WRNIP1Q96S55 665 aa10.32□□□□□ -0.76
ZNF248-208ENST00000611278 AKAP11Q9UKA4 1901 aa10.32□□□□□ -0.76
ZNF248-208ENST00000611278 H7C1W4 665 aa10.31□□□□□ -0.76
ZNF248-208ENST00000611278 SRGAP3O43295 1099 aa10.31□□□□□ -0.76
ZNF248-208ENST00000611278 RASA3Q14644 834 aa10.31□□□□□ -0.76
ZNF248-208ENST00000611278 NAP1L5Q96NT1 182 aaPredicted RBP10.31□□□□□ -0.76
ZNF248-208ENST00000611278 USP40Q9NVE5 1235 aa10.31□□□□□ -0.76
ZNF248-208ENST00000611278 TAF5LO75529 589 aa10.31□□□□□ -0.76
ZNF248-208ENST00000611278 CRKP46108 304 aa10.31□□□□□ -0.76
ZNF248-208ENST00000611278 OTUD5Q96G74 571 aa10.31□□□□□ -0.76
ZNF248-208ENST00000611278 LBHD1Q9BQE6 289 aaPredicted RBP10.31□□□□□ -0.76
ZNF248-208ENST00000611278 B4DLN1 442 aa10.31□□□□□ -0.76
ZNF248-208ENST00000611278 GPR25O00155 361 aa10.31□□□□□ -0.76
ZNF248-208ENST00000611278 TNPO2O14787 897 aaKnown RBP10.31□□□□□ -0.76
ZNF248-208ENST00000611278 SLC10A3P09131 477 aa10.31□□□□□ -0.76
ZNF248-208ENST00000611278 BCAMP50895 628 aa10.31□□□□□ -0.76
ZNF248-208ENST00000611278 MRPL12P52815 198 aaKnown RBP10.31□□□□□ -0.76
ZNF248-208ENST00000611278 ELP3Q9H9T3 547 aa10.31□□□□□ -0.76
ZNF248-208ENST00000611278 SPC25Q9HBM1 224 aa10.31□□□□□ -0.76
ZNF248-208ENST00000611278 POLLQ9UGP5 575 aa10.31□□□□□ -0.76
ZNF248-208ENST00000611278 F6X3S4 739 aa10.3□□□□□ -0.76
ZNF248-208ENST00000611278 IKQ13123 557 aaPredicted RBP10.3□□□□□ -0.76
ZNF248-208ENST00000611278 NAA16Q6N069 864 aaPredicted RBP10.3□□□□□ -0.76
ZNF248-208ENST00000611278 SAMD1Q6SPF0 538 aaPredicted RBP10.3□□□□□ -0.76
ZNF248-208ENST00000611278 TRIM35Q9UPQ4 493 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms