RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 FUT8Q9BYC5 575 aa13.8□□□□□ -0.2
TP53-220ENST00000610623 SLC52A2Q9HAB3 445 aa13.8□□□□□ -0.2
TP53-220ENST00000610623 ECHDC1Q9NTX5 307 aa13.8□□□□□ -0.2
TP53-220ENST00000610623 PARP3Q9Y6F1 533 aa13.8□□□□□ -0.2
TP53-220ENST00000610623 ALDH1L1O75891 902 aa13.8□□□□□ -0.2
TP53-220ENST00000610623 SMC2O95347 1197 aa13.8□□□□□ -0.2
TP53-220ENST00000610623 MAGEA9P43362 315 aa13.8□□□□□ -0.2
TP53-220ENST00000610623 LMAN1P49257 510 aa13.8□□□□□ -0.2
TP53-220ENST00000610623 BRF1Q92994 677 aa13.8□□□□□ -0.2
TP53-220ENST00000610623 SYTL4Q96C24 671 aaPredicted RBP13.8□□□□□ -0.2
TP53-220ENST00000610623 HMG20BQ9P0W2 317 aa13.8□□□□□ -0.2
TP53-220ENST00000610623 PI4KAP2A4QPH2 592 aa13.79□□□□□ -0.2
TP53-220ENST00000610623 ZSCAN12O43309 604 aa13.79□□□□□ -0.2
TP53-220ENST00000610623 RPS6KA5O75582 802 aa13.79□□□□□ -0.2
TP53-220ENST00000610623 GUCY2CP25092 1073 aa13.79□□□□□ -0.2
TP53-220ENST00000610623 ADD1P35611 737 aaKnown RBP13.79□□□□□ -0.2
TP53-220ENST00000610623 CLASRPQ8N2M8 674 aaKnown RBP13.79□□□□□ -0.2
TP53-220ENST00000610623 PI4KAP1Q8N8J0 262 aa13.79□□□□□ -0.2
TP53-220ENST00000610623 RABGGTAQ92696 567 aa13.79□□□□□ -0.2
TP53-220ENST00000610623 GOLPH3LQ9H4A5 285 aa13.79□□□□□ -0.2
TP53-220ENST00000610623 IFNKQ9P0W0 207 aa13.79□□□□□ -0.2
TP53-220ENST00000610623 ONECUT3O60422 494 aaPredicted RBP13.79□□□□□ -0.2
TP53-220ENST00000610623 MMP14P50281 582 aa13.79□□□□□ -0.2
TP53-220ENST00000610623 CABLES1Q8TDN4 633 aa13.79□□□□□ -0.2
TP53-220ENST00000610623 MS4A4AQ96JQ5 239 aa13.79□□□□□ -0.2
TP53-220ENST00000610623 SOS2Q07890 1332 aaPredicted RBP13.78□□□□□ -0.2
TP53-220ENST00000610623 RAD21O60216 631 aa13.78□□□□□ -0.2
TP53-220ENST00000610623 DDX58O95786 925 aaKnown RBP13.78□□□□□ -0.2
TP53-220ENST00000610623 CAMK2BQ13554 666 aa13.78□□□□□ -0.2
TP53-220ENST00000610623 ZRSR1Q15695 479 aaKnown RBP13.78□□□□□ -0.2
TP53-220ENST00000610623 NAA16Q6N069 864 aaPredicted RBP13.78□□□□□ -0.2
TP53-220ENST00000610623 KSR2Q6VAB6 950 aa13.78□□□□□ -0.2
TP53-220ENST00000610623 RSRC2Q7L4I2 434 aaKnown RBP13.78□□□□□ -0.2
TP53-220ENST00000610623 MSL3Q8N5Y2 521 aaKnown RBP13.78□□□□□ -0.2
TP53-220ENST00000610623 CCDC34Q96HJ3 373 aa13.78□□□□□ -0.2
TP53-220ENST00000610623 DCAF5Q96JK2 942 aa13.78□□□□□ -0.2
TP53-220ENST00000610623 DDX21Q9NR30 783 aaKnown RBP eCLIP13.78□□□□□ -0.2
TP53-220ENST00000610623 NHSL1Q5SYE7 1610 aa13.78□□□□□ -0.2
TP53-220ENST00000610623 CCDC151A5D8V7 595 aa13.78□□□□□ -0.2
TP53-220ENST00000610623 GOLGA6L9A6NEM1 432 aa13.78□□□□□ -0.2
TP53-220ENST00000610623 MAP3K9P80192 1104 aa13.78□□□□□ -0.2
TP53-220ENST00000610623 TTC31Q49AM3 519 aaPredicted RBP13.78□□□□□ -0.2
TP53-220ENST00000610623 ZNF790Q6PG37 636 aa13.78□□□□□ -0.2
TP53-220ENST00000610623 ZNF396Q96N95 335 aaPredicted RBP13.78□□□□□ -0.2
TP53-220ENST00000610623 TMX1Q9H3N1 280 aa13.78□□□□□ -0.2
TP53-220ENST00000610623 JRKLQ9Y4A0 524 aa13.78□□□□□ -0.2
TP53-220ENST00000610623 LAMB4A4D0S4 1761 aa13.78□□□□□ -0.2
TP53-220ENST00000610623 MAP2K7O14733 419 aa13.77□□□□□ -0.21
TP53-220ENST00000610623 GYS2P54840 703 aa13.77□□□□□ -0.21
TP53-220ENST00000610623 STK3Q13188 491 aa13.77□□□□□ -0.21
TP53-220ENST00000610623 BRD3Q15059 726 aa13.77□□□□□ -0.21
TP53-220ENST00000610623 CHRNA2Q15822 529 aa13.77□□□□□ -0.21
TP53-220ENST00000610623 NCAPGQ9BPX3 1015 aa13.77□□□□□ -0.21
TP53-220ENST00000610623 KRT32Q14532 448 aa13.76□□□□□ -0.21
TP53-220ENST00000610623 MYCBPQ99417 103 aaPredicted RBP13.76□□□□□ -0.21
TP53-220ENST00000610623 LLPHQ9BRT6 129 aaKnown RBP13.76□□□□□ -0.21
TP53-220ENST00000610623 PARD6BQ9BYG5 372 aa13.76□□□□□ -0.21
TP53-220ENST00000610623 JAK2O60674 1132 aa13.76□□□□□ -0.21
TP53-220ENST00000610623 FSIP1Q8NA03 581 aa13.76□□□□□ -0.21
TP53-220ENST00000610623 DDX11Q96FC9 970 aa13.76□□□□□ -0.21
TP53-220ENST00000610623 KIAA1468Q9P260 1216 aa13.76□□□□□ -0.21
TP53-220ENST00000610623 SLAIN2Q9P270 581 aa13.76□□□□□ -0.21
TP53-220ENST00000610623 MKRN1Q9UHC7 482 aaKnown RBP13.76□□□□□ -0.21
TP53-220ENST00000610623 MYH15Q9Y2K3 1946 aa13.76□□□□□ -0.21
TP53-220ENST00000610623 KDM4FA0A1W2PPD8 638 aa13.75□□□□□ -0.21
TP53-220ENST00000610623 CEBPZQ03701 1054 aaKnown RBP13.75□□□□□ -0.21
TP53-220ENST00000610623 OS9Q13438 667 aaPredicted RBP13.75□□□□□ -0.21
TP53-220ENST00000610623 LONRF2Q1L5Z9 754 aa13.75□□□□□ -0.21
TP53-220ENST00000610623 FMR1NBQ8N0W7 255 aaPredicted RBP13.75□□□□□ -0.21
TP53-220ENST00000610623 HNRNPLLQ8WVV9 542 aaKnown RBP13.75□□□□□ -0.21
TP53-220ENST00000610623 TCEANC2Q96MN5 208 aa13.75□□□□□ -0.21
TP53-220ENST00000610623 SDF4Q9BRK5 362 aa13.75□□□□□ -0.21
TP53-220ENST00000610623 MAP3K2Q9Y2U5 619 aa13.75□□□□□ -0.21
TP53-220ENST00000610623 MRFAP1Q9Y605 127 aa13.75□□□□□ -0.21
TP53-220ENST00000610623 WDR17Q8IZU2 1322 aa13.75□□□□□ -0.21
TP53-220ENST00000610623 FANCGO15287 622 aa13.75□□□□□ -0.21
TP53-220ENST00000610623 PPP2R3AQ06190 1150 aa13.75□□□□□ -0.21
TP53-220ENST00000610623 NMIQ13287 307 aaPredicted RBP13.75□□□□□ -0.21
TP53-220ENST00000610623 MTX1Q13505 466 aa13.75□□□□□ -0.21
TP53-220ENST00000610623 ERC1Q8IUD2 1116 aa13.75□□□□□ -0.21
TP53-220ENST00000610623 SMARCC2Q8TAQ2 1214 aa13.75□□□□□ -0.21
TP53-220ENST00000610623 PPM1EQ8WY54 764 aa13.75□□□□□ -0.21
TP53-220ENST00000610623 GOLGA1Q92805 767 aa13.75□□□□□ -0.21
TP53-220ENST00000610623 ZBTB9Q96C00 473 aa13.75□□□□□ -0.21
TP53-220ENST00000610623 A0A087WWV3 80 aa13.74□□□□□ -0.21
TP53-220ENST00000610623 IKBKBO14920 756 aa13.74□□□□□ -0.21
TP53-220ENST00000610623 CBFA2T2O43439 604 aa13.74□□□□□ -0.21
TP53-220ENST00000610623 ANXA1P04083 346 aa13.74□□□□□ -0.21
TP53-220ENST00000610623 IFIT2P09913 472 aaKnown RBP13.74□□□□□ -0.21
TP53-220ENST00000610623 TXLNAP40222 546 aa13.74□□□□□ -0.21
TP53-220ENST00000610623 GNL2Q13823 731 aaKnown RBP13.74□□□□□ -0.21
TP53-220ENST00000610623 COL9A3Q14050 684 aaPredicted RBP13.74□□□□□ -0.21
TP53-220ENST00000610623 MRPS27Q92552 414 aaKnown RBP13.74□□□□□ -0.21
TP53-220ENST00000610623 FAM227BQ96M60 508 aa13.74□□□□□ -0.21
TP53-220ENST00000610623 JCADQ9P266 1359 aa13.74□□□□□ -0.21
TP53-220ENST00000610623 COL5A2P05997 1499 aaPredicted RBP13.74□□□□□ -0.21
TP53-220ENST00000610623 A0A1W2PQ27 194 aa13.74□□□□□ -0.21
TP53-220ENST00000610623 A0A1W2PQ64 194 aa13.74□□□□□ -0.21
TP53-220ENST00000610623 A0A1W2PQD8 194 aa13.74□□□□□ -0.21
TP53-220ENST00000610623 H3BQF6 201 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms