RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 SLFN14P0C7P3 912 aa23.62■■□□□ 1.37
SSBP3-216ENST00000610401 MNS1Q8NEH6 495 aa23.62■■□□□ 1.37
SSBP3-216ENST00000610401 ERO1AQ96HE7 468 aa23.62■■□□□ 1.37
SSBP3-216ENST00000610401 FANCLQ9NW38 375 aa23.62■■□□□ 1.37
SSBP3-216ENST00000610401 RTEL1Q9NZ71 1219 aa23.62■■□□□ 1.37
SSBP3-216ENST00000610401 CAVIN2O95810 425 aa23.62■■□□□ 1.37
SSBP3-216ENST00000610401 LRP10Q7Z4F1 713 aa23.62■■□□□ 1.37
SSBP3-216ENST00000610401 PLBD2Q8NHP8 589 aa23.62■■□□□ 1.37
SSBP3-216ENST00000610401 CPLX3Q8WVH0 158 aa23.62■■□□□ 1.37
SSBP3-216ENST00000610401 CARD6Q9BX69 1037 aa23.62■■□□□ 1.37
SSBP3-216ENST00000610401 ADKP55263 362 aaKnown RBP23.61■■□□□ 1.37
SSBP3-216ENST00000610401 RABL6Q3YEC7 729 aaPredicted RBP23.61■■□□□ 1.37
SSBP3-216ENST00000610401 CCDC34Q96HJ3 373 aa23.61■■□□□ 1.37
SSBP3-216ENST00000610401 SH3TC1Q8TE82 1336 aa23.61■■□□□ 1.37
SSBP3-216ENST00000610401 NEMFO60524 1076 aa23.61■■□□□ 1.37
SSBP3-216ENST00000610401 ANTXR2P58335 489 aa23.61■■□□□ 1.37
SSBP3-216ENST00000610401 TPM4P67936 248 aa23.61■■□□□ 1.37
SSBP3-216ENST00000610401 DESI2Q9BSY9 194 aa23.61■■□□□ 1.37
SSBP3-216ENST00000610401 ZCCHC17Q9NP64 241 aaKnown RBP23.61■■□□□ 1.37
SSBP3-216ENST00000610401 HPS5Q9UPZ3 1129 aa23.61■■□□□ 1.37
SSBP3-216ENST00000610401 PALLDQ8WX93 1383 aa23.61■■□□□ 1.37
SSBP3-216ENST00000610401 KAT6BQ8WYB5 2073 aa23.61■■□□□ 1.37
SSBP3-216ENST00000610401 KDM6AO15550 1401 aaPredicted RBP23.61■■□□□ 1.37
SSBP3-216ENST00000610401 GPAA1O43292 621 aa23.6■■□□□ 1.37
SSBP3-216ENST00000610401 KIF20AO95235 890 aa23.6■■□□□ 1.37
SSBP3-216ENST00000610401 CDK11BP21127 795 aaKnown RBP23.6■■□□□ 1.37
SSBP3-216ENST00000610401 ZNF274Q96GC6 653 aaPredicted RBP23.6■■□□□ 1.37
SSBP3-216ENST00000610401 ANKARQ7Z5J8 1434 aa23.6■■□□□ 1.37
SSBP3-216ENST00000610401 IL15P40933 162 aaPredicted RBP23.6■■□□□ 1.37
SSBP3-216ENST00000610401 GSDMDP57764 484 aa23.6■■□□□ 1.37
SSBP3-216ENST00000610401 KARSQ15046 597 aaKnown RBP23.6■■□□□ 1.37
SSBP3-216ENST00000610401 VPS37DQ86XT2 251 aa23.6■■□□□ 1.37
SSBP3-216ENST00000610401 FOXP2O15409 715 aa23.59■■□□□ 1.37
SSBP3-216ENST00000610401 CLCN6P51797 869 aa23.59■■□□□ 1.37
SSBP3-216ENST00000610401 TRDNQ13061 729 aa23.59■■□□□ 1.37
SSBP3-216ENST00000610401 KCNG4Q8TDN1 519 aa23.59■■□□□ 1.37
SSBP3-216ENST00000610401 SLC9C2Q5TAH2 1124 aa23.59■■□□□ 1.37
SSBP3-216ENST00000610401 UBXN4Q92575 508 aa23.59■■□□□ 1.37
SSBP3-216ENST00000610401 CASP7P55210 303 aa23.58■■□□□ 1.37
SSBP3-216ENST00000610401 TERF2Q15554 542 aa23.58■■□□□ 1.37
SSBP3-216ENST00000610401 KLHL10Q6JEL2 608 aa23.58■■□□□ 1.37
SSBP3-216ENST00000610401 KCNJ14Q9UNX9 436 aa23.58■■□□□ 1.37
SSBP3-216ENST00000610401 hCG_1642624A0A1W2PR95 340 aa23.58■■□□□ 1.37
SSBP3-216ENST00000610401 NRDCO43847 1150 aa23.58■■□□□ 1.37
SSBP3-216ENST00000610401 GYS2P54840 703 aa23.58■■□□□ 1.37
SSBP3-216ENST00000610401 KIF23Q02241 960 aaPredicted RBP23.58■■□□□ 1.37
SSBP3-216ENST00000610401 SALL1Q9NSC2 1324 aa23.58■■□□□ 1.37
SSBP3-216ENST00000610401 METAP2P50579 478 aaKnown RBP eCLIP23.58■■□□□ 1.367e-7■■□□□ 14.3
SSBP3-216ENST00000610401 GRIN1Q05586 938 aa23.58■■□□□ 1.36
SSBP3-216ENST00000610401 NCAPHQ15003 741 aa23.58■■□□□ 1.36
SSBP3-216ENST00000610401 LONRF3Q496Y0 759 aa23.58■■□□□ 1.36
SSBP3-216ENST00000610401 TEX35Q5T0J7 233 aa23.58■■□□□ 1.36
SSBP3-216ENST00000610401 NCOA7Q8NI08 942 aa23.58■■□□□ 1.36
SSBP3-216ENST00000610401 MORC2Q9Y6X9 1032 aaPredicted RBP23.58■■□□□ 1.36
SSBP3-216ENST00000610401 CDC27P30260 824 aa23.57■■□□□ 1.36
SSBP3-216ENST00000610401 NLRP12P59046 1061 aa23.57■■□□□ 1.36
SSBP3-216ENST00000610401 SLC26A6Q9BXS9 759 aa23.57■■□□□ 1.36
SSBP3-216ENST00000610401 IRX2Q9BZI1 471 aaPredicted RBP23.57■■□□□ 1.36
SSBP3-216ENST00000610401 CYB5R4Q7L1T6 521 aa23.57■■□□□ 1.36
SSBP3-216ENST00000610401 CNNM3Q8NE01 707 aa23.57■■□□□ 1.36
SSBP3-216ENST00000610401 TOP1P11387 765 aaKnown RBP23.56■■□□□ 1.36
SSBP3-216ENST00000610401 KRT40Q6A162 431 aa23.56■■□□□ 1.36
SSBP3-216ENST00000610401 JCADQ9P266 1359 aa23.56■■□□□ 1.36
SSBP3-216ENST00000610401 CASP1P29466 404 aa23.56■■□□□ 1.36
SSBP3-216ENST00000610401 METTL24Q5JXM2 366 aa23.56■■□□□ 1.36
SSBP3-216ENST00000610401 SHC4Q6S5L8 630 aa23.56■■□□□ 1.36
SSBP3-216ENST00000610401 STRN4Q9NRL3 753 aa23.56■■□□□ 1.36
SSBP3-216ENST00000610401 FANCGO15287 622 aa23.56■■□□□ 1.36
SSBP3-216ENST00000610401 PDE4BQ07343 736 aa23.56■■□□□ 1.36
SSBP3-216ENST00000610401 AXDND1Q5T1B0 1012 aaPredicted RBP23.56■■□□□ 1.36
SSBP3-216ENST00000610401 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.56■■□□□ 1.36
SSBP3-216ENST00000610401 GNG11P61952 73 aa23.55■■□□□ 1.36
SSBP3-216ENST00000610401 CTDSPL2Q05D32 466 aa23.55■■□□□ 1.36
SSBP3-216ENST00000610401 STX17P56962 302 aa23.55■■□□□ 1.36
SSBP3-216ENST00000610401 TBC1D10CQ8IV04 446 aa23.55■■□□□ 1.36
SSBP3-216ENST00000610401 DCAF5Q96JK2 942 aa23.55■■□□□ 1.36
SSBP3-216ENST00000610401 PCDHA5Q9Y5H7 936 aa23.55■■□□□ 1.36
SSBP3-216ENST00000610401 NFAT5O94916 1531 aa23.55■■□□□ 1.36
SSBP3-216ENST00000610401 H7C1W4 665 aa23.54■■□□□ 1.36
SSBP3-216ENST00000610401 DHX16O60231 1041 aaKnown RBP23.54■■□□□ 1.36
SSBP3-216ENST00000610401 CRYBG1Q9Y4K1 1723 aa23.54■■□□□ 1.36
SSBP3-216ENST00000610401 ADGRL3Q9HAR2 1447 aa23.54■■□□□ 1.36
SSBP3-216ENST00000610401 FOXP4Q8IVH2 680 aaPredicted RBP23.54■■□□□ 1.36
SSBP3-216ENST00000610401 VGLL3A8MV65 326 aa23.54■■□□□ 1.36
SSBP3-216ENST00000610401 IQSEC3Q9UPP2 1182 aaPredicted RBP23.54■■□□□ 1.36
SSBP3-216ENST00000610401 TOM1L2Q6ZVM7 507 aa23.53■■□□□ 1.36
SSBP3-216ENST00000610401 NUP133Q8WUM0 1156 aa23.53■■□□□ 1.36
SSBP3-216ENST00000610401 NOL10Q9BSC4 688 aaKnown RBP23.53■■□□□ 1.36
SSBP3-216ENST00000610401 CNNM1Q9NRU3 951 aa23.53■■□□□ 1.36
SSBP3-216ENST00000610401 NEDD4P46934 1319 aa23.53■■□□□ 1.36
SSBP3-216ENST00000610401 LDHAL6AQ6ZMR3 332 aa23.53■■□□□ 1.36
SSBP3-216ENST00000610401 CCDC150Q8NCX0 1101 aa23.53■■□□□ 1.36
SSBP3-216ENST00000610401 STAMQ92783 540 aa23.53■■□□□ 1.36
SSBP3-216ENST00000610401 OSBPL5Q9H0X9 879 aaPredicted RBP23.53■■□□□ 1.36
SSBP3-216ENST00000610401 KDM3BQ7LBC6 1761 aa23.53■■□□□ 1.36
SSBP3-216ENST00000610401 GUCY1A2P33402 732 aa23.52■■□□□ 1.36
SSBP3-216ENST00000610401 OLFM4Q6UX06 510 aa23.52■■□□□ 1.36
SSBP3-216ENST00000610401 TFRCP02786 760 aaKnown RBP23.52■■□□□ 1.36
SSBP3-216ENST00000610401 NEK11Q8NG66 645 aa23.52■■□□□ 1.36
SSBP3-216ENST00000610401 LZTFL1Q9NQ48 299 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms