RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 C9orf78Q9NZ63 289 aaPredicted RBP21.97■■□□□ 1.11
CHMP4A-211ENST00000609024 AOX1Q06278 1338 aa21.97■■□□□ 1.11
CHMP4A-211ENST00000609024 IL16Q14005 1332 aa21.97■■□□□ 1.11
CHMP4A-211ENST00000609024 CRKP46108 304 aa21.96■■□□□ 1.11
CHMP4A-211ENST00000609024 UBE4AQ14139 1066 aa21.96■■□□□ 1.11
CHMP4A-211ENST00000609024 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.96■■□□□ 1.11
CHMP4A-211ENST00000609024 TMEM39BQ9GZU3 492 aa21.96■■□□□ 1.11
CHMP4A-211ENST00000609024 TMOD2Q9NZR1 351 aa21.96■■□□□ 1.11
CHMP4A-211ENST00000609024 CETPP11597 493 aa21.95■■□□□ 1.1
CHMP4A-211ENST00000609024 GYG1P46976 350 aa21.95■■□□□ 1.1
CHMP4A-211ENST00000609024 FXR1P51114 621 aaKnown RBP eCLIP21.95■■□□□ 1.1
CHMP4A-211ENST00000609024 TDRD7Q8NHU6 1098 aaKnown RBP21.95■■□□□ 1.1
CHMP4A-211ENST00000609024 CNKSR2Q8WXI2 1034 aa21.95■■□□□ 1.1
CHMP4A-211ENST00000609024 HOOK2Q96ED9 719 aa21.95■■□□□ 1.1
CHMP4A-211ENST00000609024 COLQQ9Y215 455 aaPredicted RBP21.95■■□□□ 1.1
CHMP4A-211ENST00000609024 A0A1B0GUL6 1792 aa21.94■■□□□ 1.1
CHMP4A-211ENST00000609024 CACNA1FO60840 1977 aa21.94■■□□□ 1.1
CHMP4A-211ENST00000609024 OTOFQ9HC10 1997 aa21.94■■□□□ 1.1
CHMP4A-211ENST00000609024 HTTP42858 3142 aa21.94■■□□□ 1.1
CHMP4A-211ENST00000609024 F6X3S4 739 aa21.94■■□□□ 1.1
CHMP4A-211ENST00000609024 GRM8O00222 908 aa21.94■■□□□ 1.1
CHMP4A-211ENST00000609024 FAM43AQ8N2R8 423 aa21.94■■□□□ 1.1
CHMP4A-211ENST00000609024 GNRH1P01148 92 aa21.93■■□□□ 1.1
CHMP4A-211ENST00000609024 BEND3Q5T5X7 828 aa21.93■■□□□ 1.1
CHMP4A-211ENST00000609024 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.93■■□□□ 1.1
CHMP4A-211ENST00000609024 TEPSINQ96N21 525 aa21.93■■□□□ 1.1
CHMP4A-211ENST00000609024 FANCIQ9NVI1 1328 aa21.92■■□□□ 1.1
CHMP4A-211ENST00000609024 TLR2O60603 784 aa21.92■■□□□ 1.1
CHMP4A-211ENST00000609024 CHAF1AQ13111 956 aaPredicted RBP21.92■■□□□ 1.1
CHMP4A-211ENST00000609024 SNAPC2Q13487 334 aa21.92■■□□□ 1.1
CHMP4A-211ENST00000609024 CAVIN4Q5BKX8 364 aa21.92■■□□□ 1.1
CHMP4A-211ENST00000609024 TBC1D22AQ8WUA7 517 aa21.92■■□□□ 1.1
CHMP4A-211ENST00000609024 SPDYE5A6NIY4 337 aa21.91■■□□□ 1.1
CHMP4A-211ENST00000609024 VAMP4O75379 141 aa21.91■■□□□ 1.1
CHMP4A-211ENST00000609024 PRMT2P55345 433 aa21.91■■□□□ 1.1
CHMP4A-211ENST00000609024 CAP1Q01518 475 aa21.91■■□□□ 1.1
CHMP4A-211ENST00000609024 EPHA10Q5JZY3 1008 aa21.91■■□□□ 1.1
CHMP4A-211ENST00000609024 ERO1BQ86YB8 467 aa21.91■■□□□ 1.1
CHMP4A-211ENST00000609024 CDAN1Q8IWY9 1227 aa21.91■■□□□ 1.1
CHMP4A-211ENST00000609024 SH3TC2Q8TF17 1288 aa21.91■■□□□ 1.1
CHMP4A-211ENST00000609024 TEKT1Q969V4 418 aa21.91■■□□□ 1.1
CHMP4A-211ENST00000609024 FAM84BQ96KN1 310 aaPredicted RBP21.91■■□□□ 1.1
CHMP4A-211ENST00000609024 WRNIP1Q96S55 665 aa21.91■■□□□ 1.1
CHMP4A-211ENST00000609024 ZCCHC17Q9NP64 241 aaKnown RBP21.91■■□□□ 1.1
CHMP4A-211ENST00000609024 DCAF15Q66K64 600 aa21.9■■□□□ 1.1
CHMP4A-211ENST00000609024 SLC4A10Q6U841 1118 aa21.9■■□□□ 1.1
CHMP4A-211ENST00000609024 CENPFP49454 3210 aa21.9■■□□□ 1.1
CHMP4A-211ENST00000609024 MKI67P46013 3256 aaKnown RBP21.9■■□□□ 1.1
CHMP4A-211ENST00000609024 MROH5Q6ZUA9 1318 aa21.89■■□□□ 1.1
CHMP4A-211ENST00000609024 LACTBP83111 547 aaPredicted RBP21.89■■□□□ 1.09
CHMP4A-211ENST00000609024 HDLBPQ00341 1268 aaKnown RBP21.89■■□□□ 1.09
CHMP4A-211ENST00000609024 DPF3Q92784 378 aa21.89■■□□□ 1.09
CHMP4A-211ENST00000609024 IQSEC3Q9UPP2 1182 aaPredicted RBP21.89■■□□□ 1.09
CHMP4A-211ENST00000609024 H0YGN5 161 aa21.88■■□□□ 1.09
CHMP4A-211ENST00000609024 ECM2O94769 699 aaPredicted RBP21.88■■□□□ 1.09
CHMP4A-211ENST00000609024 HOXD10P28358 340 aa21.88■■□□□ 1.09
CHMP4A-211ENST00000609024 CACNB3P54284 484 aa21.88■■□□□ 1.09
CHMP4A-211ENST00000609024 EXOSC9Q06265 439 aaKnown RBP21.88■■□□□ 1.09
CHMP4A-211ENST00000609024 SALL2Q9Y467 1007 aaPredicted RBP21.88■■□□□ 1.09
CHMP4A-211ENST00000609024 MAST3O60307 1309 aa21.87■■□□□ 1.09
CHMP4A-211ENST00000609024 ARAP2Q8WZ64 1704 aa21.87■■□□□ 1.09
CHMP4A-211ENST00000609024 BTBD19C9JJ37 291 aa21.87■■□□□ 1.09
CHMP4A-211ENST00000609024 ALDH1L1O75891 902 aa21.87■■□□□ 1.09
CHMP4A-211ENST00000609024 NKX2-3Q8TAU0 364 aa21.87■■□□□ 1.09
CHMP4A-211ENST00000609024 ZKSCAN4Q969J2 545 aaPredicted RBP21.87■■□□□ 1.09
CHMP4A-211ENST00000609024 ARHGAP39Q9C0H5 1083 aa21.87■■□□□ 1.09
CHMP4A-211ENST00000609024 SRCIN1Q9C0H9 1055 aa21.87■■□□□ 1.09
CHMP4A-211ENST00000609024 SNCAIPQ9Y6H5 919 aa21.87■■□□□ 1.09
CHMP4A-211ENST00000609024 IRF6O14896 467 aa21.86■■□□□ 1.09
CHMP4A-211ENST00000609024 PPIL2Q13356 520 aa21.86■■□□□ 1.09
CHMP4A-211ENST00000609024 METTL24Q5JXM2 366 aa21.86■■□□□ 1.09
CHMP4A-211ENST00000609024 RAET1EQ8TD07 263 aa21.86■■□□□ 1.09
CHMP4A-211ENST00000609024 FMNL1O95466 1100 aaPredicted RBP21.85■■□□□ 1.09
CHMP4A-211ENST00000609024 NCBP3Q53F19 620 aaKnown RBP21.85■■□□□ 1.09
CHMP4A-211ENST00000609024 FAM83AQ86UY5 434 aa21.85■■□□□ 1.09
CHMP4A-211ENST00000609024 WDR63Q8IWG1 891 aa21.85■■□□□ 1.09
CHMP4A-211ENST00000609024 PUS3Q9BZE2 481 aaKnown RBP21.85■■□□□ 1.09
CHMP4A-211ENST00000609024 BIN2Q9UBW5 565 aaPredicted RBP21.85■■□□□ 1.09
CHMP4A-211ENST00000609024 PPATQ06203 517 aa21.84■■□□□ 1.09
CHMP4A-211ENST00000609024 CHRDL2Q6WN34 429 aa21.84■■□□□ 1.09
CHMP4A-211ENST00000609024 ZNF341Q9BYN7 854 aa21.84■■□□□ 1.09
CHMP4A-211ENST00000609024 PSMC4P43686 418 aa21.83■■□□□ 1.09
CHMP4A-211ENST00000609024 FBXO33Q7Z6M2 555 aa21.83■■□□□ 1.09
CHMP4A-211ENST00000609024 ZDHHC15Q96MV8 337 aa21.83■■□□□ 1.09
CHMP4A-211ENST00000609024 HTATIP2Q9BUP3 242 aa21.83■■□□□ 1.09
CHMP4A-211ENST00000609024 CPA4Q9UI42 421 aa21.83■■□□□ 1.09
CHMP4A-211ENST00000609024 ZEB1P37275 1124 aaPredicted RBP21.82■■□□□ 1.08
CHMP4A-211ENST00000609024 GRIK5Q16478 980 aa21.82■■□□□ 1.08
CHMP4A-211ENST00000609024 FKBP1CQ5VVH2 108 aa21.82■■□□□ 1.08
CHMP4A-211ENST00000609024 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.82■■□□□ 1.08
CHMP4A-211ENST00000609024 TRIM47Q96LD4 638 aa21.82■■□□□ 1.08
CHMP4A-211ENST00000609024 RIPOR2Q9Y4F9 1068 aa21.82■■□□□ 1.08
CHMP4A-211ENST00000609024 GRK4P32298 578 aa21.81■■□□□ 1.08
CHMP4A-211ENST00000609024 UBXN2AP68543 259 aa21.81■■□□□ 1.08
CHMP4A-211ENST00000609024 MIGA2Q7L4E1 593 aa21.81■■□□□ 1.08
CHMP4A-211ENST00000609024 SUCLG2Q96I99 432 aa21.81■■□□□ 1.08
CHMP4A-211ENST00000609024 MRIQ9BWK5 157 aa21.81■■□□□ 1.08
CHMP4A-211ENST00000609024 SRRDQ9UH36 339 aa21.81■■□□□ 1.08
CHMP4A-211ENST00000609024 SUGT1Q9Y2Z0 365 aa21.81■■□□□ 1.08
CHMP4A-211ENST00000609024 PDHXO00330 501 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms