RNA–Protein interactions for RNA: ENST00000603669.5

GRAMD1A-213, Transcript of GRAM domain containing 1A, humanhuman

TSL 5

Gene GRAMD1A, Length 552 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-213ENST00000603669 CCL15Q16663 113 aa19.3■□□□□ 0.68
GRAMD1A-213ENST00000603669 FAM43AQ8N2R8 423 aa19.3■□□□□ 0.68
GRAMD1A-213ENST00000603669 FAM84BQ96KN1 310 aaPredicted RBP19.3■□□□□ 0.68
GRAMD1A-213ENST00000603669 PTCH2Q9Y6C5 1203 aa19.3■□□□□ 0.68
GRAMD1A-213ENST00000603669 IL16Q14005 1332 aa19.29■□□□□ 0.68
GRAMD1A-213ENST00000603669 FANCIQ9NVI1 1328 aa19.29■□□□□ 0.68
GRAMD1A-213ENST00000603669 GRIK5Q16478 980 aa19.29■□□□□ 0.68
GRAMD1A-213ENST00000603669 ZFYVE28Q9HCC9 887 aa19.29■□□□□ 0.68
GRAMD1A-213ENST00000603669 SALL2Q9Y467 1007 aaPredicted RBP19.29■□□□□ 0.68
GRAMD1A-213ENST00000603669 CRKP46108 304 aa19.28■□□□□ 0.68
GRAMD1A-213ENST00000603669 FXR1P51114 621 aaKnown RBP eCLIP19.28■□□□□ 0.68
GRAMD1A-213ENST00000603669 GTF2A2P52657 109 aa19.28■□□□□ 0.68
GRAMD1A-213ENST00000603669 EXOSC9Q06265 439 aaKnown RBP19.28■□□□□ 0.68
GRAMD1A-213ENST00000603669 SLC9C1Q4G0N8 1177 aa19.28■□□□□ 0.68
GRAMD1A-213ENST00000603669 NBPF11Q86T75 865 aa19.28■□□□□ 0.68
GRAMD1A-213ENST00000603669 OTUD5Q96G74 571 aa19.28■□□□□ 0.68
GRAMD1A-213ENST00000603669 PUS3Q9BZE2 481 aaKnown RBP19.28■□□□□ 0.68
GRAMD1A-213ENST00000603669 COLQQ9Y215 455 aaPredicted RBP19.28■□□□□ 0.68
GRAMD1A-213ENST00000603669 GRM8O00222 908 aa19.27■□□□□ 0.68
GRAMD1A-213ENST00000603669 UBE4AQ14139 1066 aa19.27■□□□□ 0.68
GRAMD1A-213ENST00000603669 SLC4A8Q2Y0W8 1093 aa19.27■□□□□ 0.68
GRAMD1A-213ENST00000603669 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.27■□□□□ 0.682e-6■■■■■ 27.5
GRAMD1A-213ENST00000603669 IQSEC3Q9UPP2 1182 aaPredicted RBP19.27■□□□□ 0.68
GRAMD1A-213ENST00000603669 ECM29Q5VYK3 1845 aa19.26■□□□□ 0.67
GRAMD1A-213ENST00000603669 CACNB3P54284 484 aa19.26■□□□□ 0.67
GRAMD1A-213ENST00000603669 ARHGEF6Q15052 776 aa19.26■□□□□ 0.67
GRAMD1A-213ENST00000603669 ARHGAP39Q9C0H5 1083 aa19.26■□□□□ 0.67
GRAMD1A-213ENST00000603669 C9orf78Q9NZ63 289 aaPredicted RBP19.26■□□□□ 0.67
GRAMD1A-213ENST00000603669 CSADQ9Y600 493 aa19.26■□□□□ 0.67
GRAMD1A-213ENST00000603669 CEP290O15078 2479 aa19.25■□□□□ 0.67
GRAMD1A-213ENST00000603669 TNNI2P48788 182 aa19.25■□□□□ 0.67
GRAMD1A-213ENST00000603669 SH3TC2Q8TF17 1288 aa19.25■□□□□ 0.67
GRAMD1A-213ENST00000603669 LAMB1P07942 1786 aa19.24■□□□□ 0.67
GRAMD1A-213ENST00000603669 ECM2O94769 699 aaPredicted RBP19.24■□□□□ 0.67
GRAMD1A-213ENST00000603669 SPDYE5A6NIY4 337 aa19.23■□□□□ 0.67
GRAMD1A-213ENST00000603669 CHAF1AQ13111 956 aaPredicted RBP19.23■□□□□ 0.67
GRAMD1A-213ENST00000603669 FBXO33Q7Z6M2 555 aa19.23■□□□□ 0.67
GRAMD1A-213ENST00000603669 ZKSCAN4Q969J2 545 aaPredicted RBP19.23■□□□□ 0.67
GRAMD1A-213ENST00000603669 KAZALD1Q96I82 304 aa19.23■□□□□ 0.67
GRAMD1A-213ENST00000603669 RIPOR2Q9Y4F9 1068 aa19.23■□□□□ 0.67
GRAMD1A-213ENST00000603669 SNCAIPQ9Y6H5 919 aa19.23■□□□□ 0.67
GRAMD1A-213ENST00000603669 BTBD19C9JJ37 291 aa19.22■□□□□ 0.67
GRAMD1A-213ENST00000603669 IRF6O14896 467 aa19.22■□□□□ 0.67
GRAMD1A-213ENST00000603669 TLR2O60603 784 aa19.22■□□□□ 0.67
GRAMD1A-213ENST00000603669 CETPP11597 493 aa19.22■□□□□ 0.67
GRAMD1A-213ENST00000603669 SLC4A10Q6U841 1118 aa19.22■□□□□ 0.67
GRAMD1A-213ENST00000603669 WDR63Q8IWG1 891 aa19.22■□□□□ 0.67
GRAMD1A-213ENST00000603669 SUCLG2Q96I99 432 aa19.22■□□□□ 0.67
GRAMD1A-213ENST00000603669 SPINK5Q9NQ38 1064 aaPredicted RBP19.22■□□□□ 0.67
GRAMD1A-213ENST00000603669 A0A1B0GUL6 1792 aa19.21■□□□□ 0.67
GRAMD1A-213ENST00000603669 RBBP6Q7Z6E9 1792 aaKnown RBP19.21■□□□□ 0.67
GRAMD1A-213ENST00000603669 OTOFQ9HC10 1997 aa19.21■□□□□ 0.67
GRAMD1A-213ENST00000603669 H0YGN5 161 aa19.21■□□□□ 0.67
GRAMD1A-213ENST00000603669 LACTBP83111 547 aaPredicted RBP19.21■□□□□ 0.67
GRAMD1A-213ENST00000603669 VPS37DQ86XT2 251 aa19.21■□□□□ 0.67
GRAMD1A-213ENST00000603669 ERO1BQ86YB8 467 aa19.21■□□□□ 0.67
GRAMD1A-213ENST00000603669 FRAT2O75474 233 aaPredicted RBP19.2■□□□□ 0.66
GRAMD1A-213ENST00000603669 WDHD1O75717 1129 aaPredicted RBP19.2■□□□□ 0.66
GRAMD1A-213ENST00000603669 NBPF7P0C2Y1 421 aaPredicted RBP19.2■□□□□ 0.66
GRAMD1A-213ENST00000603669 KIF22Q14807 665 aa19.2■□□□□ 0.66
GRAMD1A-213ENST00000603669 LRRC24Q50LG9 513 aa19.2■□□□□ 0.66
GRAMD1A-213ENST00000603669 NCBP3Q53F19 620 aaKnown RBP19.2■□□□□ 0.66
GRAMD1A-213ENST00000603669 WRNIP1Q96S55 665 aa19.2■□□□□ 0.66
GRAMD1A-213ENST00000603669 TRIOBPQ9H2D6 2365 aa19.2■□□□□ 0.66
GRAMD1A-213ENST00000603669 ALDH1L1O75891 902 aa19.19■□□□□ 0.66
GRAMD1A-213ENST00000603669 HDLBPQ00341 1268 aaKnown RBP19.19■□□□□ 0.66
GRAMD1A-213ENST00000603669 SNAPC2Q13487 334 aa19.19■□□□□ 0.66
GRAMD1A-213ENST00000603669 TEKT1Q969V4 418 aa19.19■□□□□ 0.66
GRAMD1A-213ENST00000603669 SRCIN1Q9C0H9 1055 aa19.19■□□□□ 0.66
GRAMD1A-213ENST00000603669 MROH5Q6ZUA9 1318 aa19.19■□□□□ 0.66
GRAMD1A-213ENST00000603669 CTGFP29279 349 aa19.18■□□□□ 0.66
GRAMD1A-213ENST00000603669 BCAMP50895 628 aa19.18■□□□□ 0.66
GRAMD1A-213ENST00000603669 APOBEC3HQ6NTF7 200 aaKnown RBP19.18■□□□□ 0.66
GRAMD1A-213ENST00000603669 MIGA2Q7L4E1 593 aa19.18■□□□□ 0.66
GRAMD1A-213ENST00000603669 SZT2Q5T011 3432 aa19.18■□□□□ 0.66
GRAMD1A-213ENST00000603669 MTFR1Q15390 333 aa19.17■□□□□ 0.66
GRAMD1A-213ENST00000603669 CAVIN4Q5BKX8 364 aa19.17■□□□□ 0.66
GRAMD1A-213ENST00000603669 TBC1D22AQ8WUA7 517 aa19.17■□□□□ 0.66
GRAMD1A-213ENST00000603669 ZDHHC15Q96MV8 337 aa19.17■□□□□ 0.66
GRAMD1A-213ENST00000603669 MRIQ9BWK5 157 aa19.17■□□□□ 0.66
GRAMD1A-213ENST00000603669 ZCCHC17Q9NP64 241 aaKnown RBP19.17■□□□□ 0.66
GRAMD1A-213ENST00000603669 CPA4Q9UI42 421 aa19.17■□□□□ 0.66
GRAMD1A-213ENST00000603669 CACNA1FO60840 1977 aa19.16■□□□□ 0.66
GRAMD1A-213ENST00000603669 PPIL2Q13356 520 aa19.16■□□□□ 0.66
GRAMD1A-213ENST00000603669 METTL24Q5JXM2 366 aa19.16■□□□□ 0.66
GRAMD1A-213ENST00000603669 C17orf99Q6UX52 265 aa19.16■□□□□ 0.66
GRAMD1A-213ENST00000603669 FAM83AQ86UY5 434 aa19.16■□□□□ 0.66
GRAMD1A-213ENST00000603669 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.16■□□□□ 0.66
GRAMD1A-213ENST00000603669 BICC1Q9H694 974 aaKnown RBP19.16■□□□□ 0.66
GRAMD1A-213ENST00000603669 TMOD2Q9NZR1 351 aa19.16■□□□□ 0.66
GRAMD1A-213ENST00000603669 PDE8BO95263 885 aa19.15■□□□□ 0.66
GRAMD1A-213ENST00000603669 GNRH1P01148 92 aa19.15■□□□□ 0.66
GRAMD1A-213ENST00000603669 INPP5BP32019 993 aa19.15■□□□□ 0.66
GRAMD1A-213ENST00000603669 PSMC4P43686 418 aa19.15■□□□□ 0.66
GRAMD1A-213ENST00000603669 KLHDC4Q8TBB5 520 aa19.15■□□□□ 0.66
GRAMD1A-213ENST00000603669 TRIM47Q96LD4 638 aa19.15■□□□□ 0.66
GRAMD1A-213ENST00000603669 ZSWIM8A7E2V4 1837 aa19.14■□□□□ 0.65
GRAMD1A-213ENST00000603669 PRMT2P55345 433 aa19.14■□□□□ 0.65
GRAMD1A-213ENST00000603669 PPATQ06203 517 aa19.14■□□□□ 0.65
GRAMD1A-213ENST00000603669 FKBP1CQ5VVH2 108 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms