RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 ABCF2Q9UG63 623 aa19.59■□□□□ 0.73
PPFIA3-213ENST00000602905 COL1A1P02452 1464 aaPredicted RBP19.59■□□□□ 0.73
PPFIA3-213ENST00000602905 MCAMP43121 646 aa19.58■□□□□ 0.72
PPFIA3-213ENST00000602905 CRKP46108 304 aa19.58■□□□□ 0.72
PPFIA3-213ENST00000602905 ERICH6Q7L0X2 663 aa19.58■□□□□ 0.72
PPFIA3-213ENST00000602905 AKAP11Q9UKA4 1901 aa19.58■□□□□ 0.72
PPFIA3-213ENST00000602905 TRPM7Q96QT4 1865 aa19.58■□□□□ 0.72
PPFIA3-213ENST00000602905 PITPNM2Q9BZ72 1349 aa19.57■□□□□ 0.72
PPFIA3-213ENST00000602905 MYH2Q9UKX2 1941 aa19.57■□□□□ 0.72
PPFIA3-213ENST00000602905 HSPA6P17066 643 aa19.57■□□□□ 0.72
PPFIA3-213ENST00000602905 NBPF9Q3BBW0 867 aa19.57■□□□□ 0.72
PPFIA3-213ENST00000602905 ANGEL2Q5VTE6 544 aaKnown RBP19.57■□□□□ 0.72
PPFIA3-213ENST00000602905 KRT26Q7Z3Y9 468 aa19.57■□□□□ 0.72
PPFIA3-213ENST00000602905 DZIP1Q86YF9 867 aaKnown RBP19.57■□□□□ 0.72
PPFIA3-213ENST00000602905 SLF2Q8IX21 1173 aa19.57■□□□□ 0.72
PPFIA3-213ENST00000602905 MRIQ9BWK5 157 aa19.57■□□□□ 0.72
PPFIA3-213ENST00000602905 SPDYE2BA6NHP3 402 aa19.56■□□□□ 0.72
PPFIA3-213ENST00000602905 SMARCA5O60264 1052 aaPredicted RBP19.56■□□□□ 0.72
PPFIA3-213ENST00000602905 ITGBL1O95965 494 aaPredicted RBP19.56■□□□□ 0.72
PPFIA3-213ENST00000602905 SPDYE6P0CI01 402 aa19.56■□□□□ 0.72
PPFIA3-213ENST00000602905 GRIK5Q16478 980 aa19.56■□□□□ 0.72
PPFIA3-213ENST00000602905 GPATCH3Q96I76 525 aa19.56■□□□□ 0.72
PPFIA3-213ENST00000602905 GLIS2Q9BZE0 524 aaPredicted RBP19.56■□□□□ 0.72
PPFIA3-213ENST00000602905 PRDX5P30044 214 aa19.55■□□□□ 0.72
PPFIA3-213ENST00000602905 APLP1P51693 650 aa19.55■□□□□ 0.72
PPFIA3-213ENST00000602905 USP48Q86UV5 1035 aa19.55■□□□□ 0.72
PPFIA3-213ENST00000602905 APOBEC3FQ8IUX4 373 aaKnown RBP19.55■□□□□ 0.72
PPFIA3-213ENST00000602905 ZBED3Q96IU2 234 aaPredicted RBP19.55■□□□□ 0.72
PPFIA3-213ENST00000602905 SNRKQ9NRH2 765 aa19.55■□□□□ 0.72
PPFIA3-213ENST00000602905 LRP2BPQ9P2M1 347 aa19.55■□□□□ 0.72
PPFIA3-213ENST00000602905 PASKQ96RG2 1323 aa19.54■□□□□ 0.72
PPFIA3-213ENST00000602905 HHIPL2Q6UWX4 724 aa19.54■□□□□ 0.72
PPFIA3-213ENST00000602905 PI16Q6UXB8 463 aa19.54■□□□□ 0.72
PPFIA3-213ENST00000602905 PRMT6Q96LA8 375 aaPredicted RBP19.54■□□□□ 0.72
PPFIA3-213ENST00000602905 RAI14Q9P0K7 980 aa19.54■□□□□ 0.72
PPFIA3-213ENST00000602905 ASTN2O75129 1339 aaPredicted RBP19.53■□□□□ 0.72
PPFIA3-213ENST00000602905 LDHCP07864 332 aa19.53■□□□□ 0.72
PPFIA3-213ENST00000602905 GSTO1P78417 241 aa19.53■□□□□ 0.72
PPFIA3-213ENST00000602905 ANKRD45Q5TZF3 282 aa19.53■□□□□ 0.72
PPFIA3-213ENST00000602905 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.53■□□□□ 0.72
PPFIA3-213ENST00000602905 ZDHHC15Q96MV8 337 aa19.53■□□□□ 0.72
PPFIA3-213ENST00000602905 VEZTQ9HBM0 779 aa19.53■□□□□ 0.72
PPFIA3-213ENST00000602905 TMOD2Q9NZR1 351 aa19.53■□□□□ 0.72
PPFIA3-213ENST00000602905 IGSF3O75054 1194 aa19.52■□□□□ 0.72
PPFIA3-213ENST00000602905 ZAP70P43403 619 aa19.52■□□□□ 0.72
PPFIA3-213ENST00000602905 TTF1Q15361 905 aaPredicted RBP19.52■□□□□ 0.72
PPFIA3-213ENST00000602905 TBC1D9Q6ZT07 1266 aa19.52■□□□□ 0.72
PPFIA3-213ENST00000602905 PCDHAC2Q9Y5I4 1007 aa19.52■□□□□ 0.72
PPFIA3-213ENST00000602905 CLRN2A0PK11 232 aa19.51■□□□□ 0.71
PPFIA3-213ENST00000602905 TMEM88BA6NKF7 163 aa19.51■□□□□ 0.71
PPFIA3-213ENST00000602905 ADM5C9JUS6 153 aa19.51■□□□□ 0.71
PPFIA3-213ENST00000602905 TRAF5O00463 557 aa19.51■□□□□ 0.71
PPFIA3-213ENST00000602905 NEFLP07196 543 aa19.51■□□□□ 0.71
PPFIA3-213ENST00000602905 TNFAIP1Q13829 316 aa19.51■□□□□ 0.71
PPFIA3-213ENST00000602905 TDRD3Q9H7E2 651 aaKnown RBP19.51■□□□□ 0.71
PPFIA3-213ENST00000602905 ZNF408Q9H9D4 720 aa19.51■□□□□ 0.71
PPFIA3-213ENST00000602905 MYO5AQ9Y4I1 1855 aaKnown RBP19.51■□□□□ 0.71
PPFIA3-213ENST00000602905 CYP2E1P05181 493 aaPredicted RBP19.5■□□□□ 0.71
PPFIA3-213ENST00000602905 ATP5JP18859 108 aa19.5■□□□□ 0.71
PPFIA3-213ENST00000602905 TNNI2P48788 182 aa19.5■□□□□ 0.71
PPFIA3-213ENST00000602905 DIXDC1Q155Q3 683 aa19.5■□□□□ 0.71
PPFIA3-213ENST00000602905 SPDYE2Q495Y8 402 aa19.5■□□□□ 0.71
PPFIA3-213ENST00000602905 NOL10Q9BSC4 688 aaKnown RBP19.5■□□□□ 0.71
PPFIA3-213ENST00000602905 ECHDC1Q9NTX5 307 aa19.5■□□□□ 0.71
PPFIA3-213ENST00000602905 ZNF70Q9UC06 446 aaPredicted RBP19.5■□□□□ 0.71
PPFIA3-213ENST00000602905 CELF2O95319 508 aaKnown RBP19.49■□□□□ 0.71
PPFIA3-213ENST00000602905 NF2P35240 595 aa19.49■□□□□ 0.71
PPFIA3-213ENST00000602905 MECOMQ03112 1051 aa19.49■□□□□ 0.71
PPFIA3-213ENST00000602905 DNAJC2Q99543 621 aaKnown RBP19.49■□□□□ 0.71
PPFIA3-213ENST00000602905 CREBZFQ9NS37 354 aa19.49■□□□□ 0.71
PPFIA3-213ENST00000602905 DAGLAQ9Y4D2 1042 aa19.49■□□□□ 0.71
PPFIA3-213ENST00000602905 PPP2R3BQ9Y5P8 575 aa19.49■□□□□ 0.71
PPFIA3-213ENST00000602905 MAST2Q6P0Q8 1798 aa19.49■□□□□ 0.71
PPFIA3-213ENST00000602905 IGHDP01880 384 aa19.48■□□□□ 0.71
PPFIA3-213ENST00000602905 MAP3K12Q12852 859 aa19.48■□□□□ 0.71
PPFIA3-213ENST00000602905 NAA16Q6N069 864 aaPredicted RBP19.48■□□□□ 0.71
PPFIA3-213ENST00000602905 SMC5Q8IY18 1101 aa19.48■□□□□ 0.71
PPFIA3-213ENST00000602905 NSUN4Q96CB9 384 aaKnown RBP19.48■□□□□ 0.71
PPFIA3-213ENST00000602905 CDCA5Q96FF9 252 aa19.48■□□□□ 0.71
PPFIA3-213ENST00000602905 FAM163AQ96GL9 167 aaPredicted RBP19.48■□□□□ 0.71
PPFIA3-213ENST00000602905 BOLA2Q9H3K6 86 aa19.48■□□□□ 0.71
PPFIA3-213ENST00000602905 AK9Q5TCS8 1911 aa19.48■□□□□ 0.71
PPFIA3-213ENST00000602905 ERC2O15083 957 aa19.47■□□□□ 0.71
PPFIA3-213ENST00000602905 IDH1O75874 414 aaKnown RBP19.47■□□□□ 0.71
PPFIA3-213ENST00000602905 FMR1Q06787 632 aaKnown RBP eCLIP19.47■□□□□ 0.71
PPFIA3-213ENST00000602905 B4GALNT3Q6L9W6 998 aa19.47■□□□□ 0.71
PPFIA3-213ENST00000602905 APOBEC3HQ6NTF7 200 aaKnown RBP19.47■□□□□ 0.71
PPFIA3-213ENST00000602905 DEFB129Q9H1M3 183 aa19.47■□□□□ 0.71
PPFIA3-213ENST00000602905 PIH1D3Q9NQM4 214 aaKnown RBP19.47■□□□□ 0.71
PPFIA3-213ENST00000602905 SCAF8Q9UPN6 1271 aaKnown RBP19.47■□□□□ 0.71
PPFIA3-213ENST00000602905 MROH7-TTC4A0A0A0MT08 1334 aa19.47■□□□□ 0.71
PPFIA3-213ENST00000602905 GAKO14976 1311 aa19.47■□□□□ 0.71
PPFIA3-213ENST00000602905 TMED8Q6PL24 325 aaPredicted RBP19.46■□□□□ 0.71
PPFIA3-213ENST00000602905 C2orf69Q8N8R5 385 aa19.46■□□□□ 0.71
PPFIA3-213ENST00000602905 HAUS7Q99871 368 aa19.46■□□□□ 0.71
PPFIA3-213ENST00000602905 USP40Q9NVE5 1235 aa19.46■□□□□ 0.71
PPFIA3-213ENST00000602905 PAG1Q9NWQ8 432 aa19.46■□□□□ 0.71
PPFIA3-213ENST00000602905 ABT1Q9ULW3 272 aaKnown RBP19.46■□□□□ 0.71
PPFIA3-213ENST00000602905 NDUFB9Q9Y6M9 179 aa19.46■□□□□ 0.71
PPFIA3-213ENST00000602905 TTC41PQ6P2S7 1318 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms