RNA–Protein interactions for RNA: ENST00000602841.5

SCNM1-207, Transcript of sodium channel modifier 1, humanhuman

TSL 3

Gene SCNM1, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-207ENST00000602841 CAVIN4Q5BKX8 364 aa13.03□□□□□ -0.32
SCNM1-207ENST00000602841 MAP1SQ66K74 1059 aaPredicted RBP13.03□□□□□ -0.32
SCNM1-207ENST00000602841 CC2D2BQ6DHV5 1058 aa13.03□□□□□ -0.32
SCNM1-207ENST00000602841 DPP8Q6V1X1 898 aaPredicted RBP13.03□□□□□ -0.32
SCNM1-207ENST00000602841 IL17RAQ96F46 866 aa13.03□□□□□ -0.32
SCNM1-207ENST00000602841 ZNF219Q9P2Y4 722 aaPredicted RBP13.03□□□□□ -0.32
SCNM1-207ENST00000602841 SALL1Q9NSC2 1324 aa13.03□□□□□ -0.32
SCNM1-207ENST00000602841 THSD7BQ9C0I4 1608 aa13.02□□□□□ -0.32
SCNM1-207ENST00000602841 KCNJ4P48050 445 aa13.02□□□□□ -0.33
SCNM1-207ENST00000602841 MFAP1P55081 439 aaKnown RBP13.02□□□□□ -0.33
SCNM1-207ENST00000602841 PTH1RQ03431 593 aa13.02□□□□□ -0.33
SCNM1-207ENST00000602841 GRM1Q13255 1194 aa13.02□□□□□ -0.33
SCNM1-207ENST00000602841 CWC27Q6UX04 472 aaKnown RBP13.02□□□□□ -0.33
SCNM1-207ENST00000602841 FSD1Q9BTV5 496 aa13.02□□□□□ -0.33
SCNM1-207ENST00000602841 KCNQ5Q9NR82 932 aa13.02□□□□□ -0.33
SCNM1-207ENST00000602841 DENND2AQ9ULE3 1009 aa13.02□□□□□ -0.33
SCNM1-207ENST00000602841 FAM205AQ6ZU69 1335 aa13.02□□□□□ -0.33
SCNM1-207ENST00000602841 DOCK2Q92608 1830 aa13.02□□□□□ -0.33
SCNM1-207ENST00000602841 CCDC88AQ3V6T2 1871 aa13.02□□□□□ -0.33
SCNM1-207ENST00000602841 C6orf229H3BNL8 230 aa13.01□□□□□ -0.33
SCNM1-207ENST00000602841 M0R2C6 588 aa13.01□□□□□ -0.33
SCNM1-207ENST00000602841 AOC2O75106 756 aa13.01□□□□□ -0.33
SCNM1-207ENST00000602841 ECE1P42892 770 aa13.01□□□□□ -0.33
SCNM1-207ENST00000602841 UBE3CQ15386 1083 aa13.01□□□□□ -0.33
SCNM1-207ENST00000602841 ADGRA1Q86SQ6 560 aa13.01□□□□□ -0.33
SCNM1-207ENST00000602841 KCNB2Q92953 911 aa13.01□□□□□ -0.33
SCNM1-207ENST00000602841 PSMD1Q99460 953 aa13.01□□□□□ -0.33
SCNM1-207ENST00000602841 COA1Q9GZY4 146 aa13.01□□□□□ -0.33
SCNM1-207ENST00000602841 PUS7LQ9H0K6 701 aaKnown RBP13.01□□□□□ -0.33
SCNM1-207ENST00000602841 HELLSQ9NRZ9 838 aa13.01□□□□□ -0.33
SCNM1-207ENST00000602841 CLEC11AQ9Y240 323 aa13.01□□□□□ -0.33
SCNM1-207ENST00000602841 MAST3O60307 1309 aa13□□□□□ -0.33
SCNM1-207ENST00000602841 HIP1O00291 1037 aa13□□□□□ -0.33
SCNM1-207ENST00000602841 RIMBP2O15034 1052 aa13□□□□□ -0.33
SCNM1-207ENST00000602841 EPB41L2O43491 1005 aaKnown RBP13□□□□□ -0.33
SCNM1-207ENST00000602841 PDE6AP16499 860 aa13□□□□□ -0.33
SCNM1-207ENST00000602841 FMR1Q06787 632 aaKnown RBP eCLIP13□□□□□ -0.33
SCNM1-207ENST00000602841 KIAA2012Q0VF49 1180 aa13□□□□□ -0.33
SCNM1-207ENST00000602841 TTF1Q15361 905 aaPredicted RBP13□□□□□ -0.33
SCNM1-207ENST00000602841 WASHC4Q2M389 1173 aa13□□□□□ -0.33
SCNM1-207ENST00000602841 HABP4Q5JVS0 413 aaKnown RBP13□□□□□ -0.33
SCNM1-207ENST00000602841 CCDC129Q6ZRS4 1044 aa13□□□□□ -0.33
SCNM1-207ENST00000602841 PAXIP1Q6ZW49 1069 aaPredicted RBP13□□□□□ -0.33
SCNM1-207ENST00000602841 CERS5Q8N5B7 392 aa13□□□□□ -0.33
SCNM1-207ENST00000602841 MAP4K1Q92918 833 aa13□□□□□ -0.33
SCNM1-207ENST00000602841 GNL3LQ9NVN8 582 aaKnown RBP13□□□□□ -0.33
SCNM1-207ENST00000602841 CACNA1SQ13698 1873 aa12.99□□□□□ -0.33
SCNM1-207ENST00000602841 ZNF646O15015 1829 aaPredicted RBP12.99□□□□□ -0.33
SCNM1-207ENST00000602841 RAD50Q92878 1312 aa12.99□□□□□ -0.33
SCNM1-207ENST00000602841 ZNF532Q9HCE3 1301 aa12.99□□□□□ -0.33
SCNM1-207ENST00000602841 YDJCA8MPS7 323 aa12.99□□□□□ -0.33
SCNM1-207ENST00000602841 PRDX5P30044 214 aa12.99□□□□□ -0.33
SCNM1-207ENST00000602841 MAP2K2P36507 400 aa12.99□□□□□ -0.33
SCNM1-207ENST00000602841 DOK7Q18PE1 504 aa12.99□□□□□ -0.33
SCNM1-207ENST00000602841 MCMDC2Q4G0Z9 681 aa12.99□□□□□ -0.33
SCNM1-207ENST00000602841 CCDC93Q567U6 631 aa12.99□□□□□ -0.33
SCNM1-207ENST00000602841 VPS53Q5VIR6 699 aa12.99□□□□□ -0.33
SCNM1-207ENST00000602841 ZNF804AQ7Z570 1209 aa12.99□□□□□ -0.33
SCNM1-207ENST00000602841 APPBP2Q92624 585 aa12.99□□□□□ -0.33
SCNM1-207ENST00000602841 NSUN4Q96CB9 384 aaKnown RBP12.99□□□□□ -0.33
SCNM1-207ENST00000602841 C22orf23Q9BZE7 217 aa12.99□□□□□ -0.33
SCNM1-207ENST00000602841 MYO5AQ9Y4I1 1855 aaKnown RBP12.99□□□□□ -0.33
SCNM1-207ENST00000602841 LTBP3Q9NS15 1303 aa12.98□□□□□ -0.33
SCNM1-207ENST00000602841 CA12O43570 354 aa12.98□□□□□ -0.33
SCNM1-207ENST00000602841 ZFYP08048 801 aaPredicted RBP12.98□□□□□ -0.33
SCNM1-207ENST00000602841 NECTIN1Q15223 517 aa12.98□□□□□ -0.33
SCNM1-207ENST00000602841 GRIPAP1Q4V328 841 aa12.98□□□□□ -0.33
SCNM1-207ENST00000602841 SLC9C2Q5TAH2 1124 aa12.98□□□□□ -0.33
SCNM1-207ENST00000602841 RTKN2Q8IZC4 609 aa12.98□□□□□ -0.33
SCNM1-207ENST00000602841 ZC3H12CQ9C0D7 883 aaKnown RBP12.98□□□□□ -0.33
SCNM1-207ENST00000602841 DIAPH3Q9NSV4 1193 aa12.98□□□□□ -0.33
SCNM1-207ENST00000602841 PALD1Q9ULE6 856 aa12.98□□□□□ -0.33
SCNM1-207ENST00000602841 JAG2Q9Y219 1238 aa12.98□□□□□ -0.33
SCNM1-207ENST00000602841 CASP8AP2Q9UKL3 1982 aa12.98□□□□□ -0.33
SCNM1-207ENST00000602841 ADAMTSL1Q8N6G6 1762 aa12.97□□□□□ -0.33
SCNM1-207ENST00000602841 IDH1O75874 414 aaKnown RBP12.97□□□□□ -0.33
SCNM1-207ENST00000602841 EPHX2P34913 555 aa12.97□□□□□ -0.33
SCNM1-207ENST00000602841 HSPA4P34932 840 aa12.97□□□□□ -0.33
SCNM1-207ENST00000602841 COL9A3Q14050 684 aaPredicted RBP12.97□□□□□ -0.33
SCNM1-207ENST00000602841 AOC3Q16853 763 aa12.97□□□□□ -0.33
SCNM1-207ENST00000602841 VPS37DQ86XT2 251 aa12.97□□□□□ -0.33
SCNM1-207ENST00000602841 EYA3Q99504 573 aa12.97□□□□□ -0.33
SCNM1-207ENST00000602841 RIOK1Q9BRS2 568 aaKnown RBP12.97□□□□□ -0.33
SCNM1-207ENST00000602841 MXD3Q9BW11 206 aa12.97□□□□□ -0.33
SCNM1-207ENST00000602841 VPS33BQ9H267 617 aa12.97□□□□□ -0.33
SCNM1-207ENST00000602841 TAOK3Q9H2K8 898 aa12.97□□□□□ -0.33
SCNM1-207ENST00000602841 HACL1Q9UJ83 578 aa12.97□□□□□ -0.33
SCNM1-207ENST00000602841 TAF6LQ9Y6J9 622 aa12.97□□□□□ -0.33
SCNM1-207ENST00000602841 CCDC171Q6TFL3 1326 aa12.96□□□□□ -0.33
SCNM1-207ENST00000602841 IGSF3O75054 1194 aa12.96□□□□□ -0.33
SCNM1-207ENST00000602841 MECOMQ03112 1051 aa12.96□□□□□ -0.33
SCNM1-207ENST00000602841 CHAF1AQ13111 956 aaPredicted RBP12.96□□□□□ -0.33
SCNM1-207ENST00000602841 DACT2Q5SW24 774 aa12.96□□□□□ -0.33
SCNM1-207ENST00000602841 CST9Q5W186 159 aa12.96□□□□□ -0.33
SCNM1-207ENST00000602841 PODNQ7Z5L7 613 aa12.96□□□□□ -0.33
SCNM1-207ENST00000602841 RASEFQ8IZ41 740 aa12.96□□□□□ -0.33
SCNM1-207ENST00000602841 MAGEB6Q8N7X4 407 aa12.96□□□□□ -0.33
SCNM1-207ENST00000602841 WDR66Q8TBY9 1149 aa12.96□□□□□ -0.33
SCNM1-207ENST00000602841 RUFY2Q8WXA3 655 aa12.96□□□□□ -0.33
SCNM1-207ENST00000602841 STRBPQ96SI9 672 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms