RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 ZBTB48P10074 688 aaPredicted RBP26.54■■□□□ 1.84
PPFIA3-209ENST00000602783 INHBEP58166 350 aa26.54■■□□□ 1.84
PPFIA3-209ENST00000602783 TBC1D22AQ8WUA7 517 aa26.54■■□□□ 1.84
PPFIA3-209ENST00000602783 R3HDMLQ9H3Y0 253 aa26.54■■□□□ 1.84
PPFIA3-209ENST00000602783 TCP10L2B9ZVM9 353 aa26.53■■□□□ 1.84
PPFIA3-209ENST00000602783 NOM1Q5C9Z4 860 aaKnown RBP26.53■■□□□ 1.84
PPFIA3-209ENST00000602783 CFHR5Q9BXR6 569 aa26.53■■□□□ 1.84
PPFIA3-209ENST00000602783 EYA2O00167 538 aa26.52■■□□□ 1.84
PPFIA3-209ENST00000602783 ALDH1A1P00352 501 aa26.52■■□□□ 1.84
PPFIA3-209ENST00000602783 IFIT1P09914 478 aaKnown RBP26.52■■□□□ 1.84
PPFIA3-209ENST00000602783 RFX5P48382 616 aaPredicted RBP26.52■■□□□ 1.84
PPFIA3-209ENST00000602783 PUM3Q15397 648 aaKnown RBP26.52■■□□□ 1.84
PPFIA3-209ENST00000602783 PKN2Q16513 984 aaKnown RBP26.52■■□□□ 1.84
PPFIA3-209ENST00000602783 IFNL1Q8IU54 200 aa26.52■■□□□ 1.84
PPFIA3-209ENST00000602783 ANKRD13AQ8IZ07 590 aa26.52■■□□□ 1.84
PPFIA3-209ENST00000602783 FKTNO75072 461 aa26.51■■□□□ 1.83
PPFIA3-209ENST00000602783 FGFR2P21802 821 aa26.51■■□□□ 1.83
PPFIA3-209ENST00000602783 SOX10P56693 466 aa26.51■■□□□ 1.83
PPFIA3-209ENST00000602783 DIEXFQ68CQ4 756 aaKnown RBP26.51■■□□□ 1.83
PPFIA3-209ENST00000602783 MIER1Q8N108 512 aa26.51■■□□□ 1.83
PPFIA3-209ENST00000602783 NOB1Q9ULX3 412 aaKnown RBP26.51■■□□□ 1.83
PPFIA3-209ENST00000602783 TNNI2P48788 182 aa26.5■■□□□ 1.83
PPFIA3-209ENST00000602783 HDLBPQ00341 1268 aaKnown RBP26.5■■□□□ 1.83
PPFIA3-209ENST00000602783 TEPSINQ96N21 525 aa26.5■■□□□ 1.83
PPFIA3-209ENST00000602783 TMEM39BQ9GZU3 492 aa26.5■■□□□ 1.83
PPFIA3-209ENST00000602783 HPS5Q9UPZ3 1129 aa26.5■■□□□ 1.83
PPFIA3-209ENST00000602783 UBTFL1P0CB47 393 aaPredicted RBP26.49■■□□□ 1.83
PPFIA3-209ENST00000602783 RARSP54136 660 aaKnown RBP26.49■■□□□ 1.83
PPFIA3-209ENST00000602783 CDAN1Q8IWY9 1227 aa26.49■■□□□ 1.83
PPFIA3-209ENST00000602783 TEKT1Q969V4 418 aa26.49■■□□□ 1.83
PPFIA3-209ENST00000602783 KIF16BQ96L93 1317 aa26.48■■□□□ 1.83
PPFIA3-209ENST00000602783 IGF2BP3O00425 579 aaKnown RBP eCLIP26.48■■□□□ 1.83
PPFIA3-209ENST00000602783 GJA5P36382 358 aa26.48■■□□□ 1.83
PPFIA3-209ENST00000602783 API5Q9BZZ5 524 aaKnown RBP26.48■■□□□ 1.83
PPFIA3-209ENST00000602783 SLC5A1P13866 664 aa26.47■■□□□ 1.83
PPFIA3-209ENST00000602783 ATG9AQ7Z3C6 839 aa26.47■■□□□ 1.83
PPFIA3-209ENST00000602783 LPIN2Q92539 896 aa26.47■■□□□ 1.83
PPFIA3-209ENST00000602783 MRIQ9BWK5 157 aa26.47■■□□□ 1.83
PPFIA3-209ENST00000602783 ELP3Q9H9T3 547 aa26.47■■□□□ 1.83
PPFIA3-209ENST00000602783 CACNB3P54284 484 aa26.46■■□□□ 1.83
PPFIA3-209ENST00000602783 SIL1Q9H173 461 aa26.46■■□□□ 1.83
PPFIA3-209ENST00000602783 MYH13Q9UKX3 1938 aa26.45■■□□□ 1.83
PPFIA3-209ENST00000602783 ZDHHC15Q96MV8 337 aa26.45■■□□□ 1.82
PPFIA3-209ENST00000602783 SUGT1Q9Y2Z0 365 aa26.45■■□□□ 1.82
PPFIA3-209ENST00000602783 OTUD7BQ6GQQ9 843 aa26.44■■□□□ 1.82
PPFIA3-209ENST00000602783 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.44■■□□□ 1.82
PPFIA3-209ENST00000602783 OPTNQ96CV9 577 aa26.44■■□□□ 1.82
PPFIA3-209ENST00000602783 TMOD2Q9NZR1 351 aa26.44■■□□□ 1.82
PPFIA3-209ENST00000602783 MAST3O60307 1309 aa26.43■■□□□ 1.82
PPFIA3-209ENST00000602783 MAP3K9P80192 1104 aa26.43■■□□□ 1.82
PPFIA3-209ENST00000602783 APOBEC3HQ6NTF7 200 aaKnown RBP26.43■■□□□ 1.82
PPFIA3-209ENST00000602783 FBXO46Q6PJ61 603 aaPredicted RBP26.43■■□□□ 1.82
PPFIA3-209ENST00000602783 WDR66Q8TBY9 1149 aa26.43■■□□□ 1.82
PPFIA3-209ENST00000602783 CEP126Q9P2H0 1117 aa26.43■■□□□ 1.82
PPFIA3-209ENST00000602783 FBXO3Q9UK99 471 aa26.43■■□□□ 1.82
PPFIA3-209ENST00000602783 LRRFIP2Q9Y608 721 aaKnown RBP26.43■■□□□ 1.82
PPFIA3-209ENST00000602783 HHIPL2Q6UWX4 724 aa26.42■■□□□ 1.82
PPFIA3-209ENST00000602783 PTPN18Q99952 460 aa26.42■■□□□ 1.82
PPFIA3-209ENST00000602783 HDAC5Q9UQL6 1122 aa26.42■■□□□ 1.82
PPFIA3-209ENST00000602783 TESPA1A2RU30 521 aaPredicted RBP26.41■■□□□ 1.82
PPFIA3-209ENST00000602783 CIAO1O76071 339 aa26.41■■□□□ 1.82
PPFIA3-209ENST00000602783 HNRNPUQ00839 825 aaKnown RBP eCLIP26.41■■□□□ 1.82
PPFIA3-209ENST00000602783 ATP2B3Q16720 1220 aa26.41■■□□□ 1.82
PPFIA3-209ENST00000602783 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.41■■□□□ 1.823e-7■■■□□ 16.8
PPFIA3-209ENST00000602783 VGLL4Q14135 290 aa26.4■■□□□ 1.82
PPFIA3-209ENST00000602783 CNKSR2Q8WXI2 1034 aa26.4■■□□□ 1.82
PPFIA3-209ENST00000602783 MS4A4AQ96JQ5 239 aa26.4■■□□□ 1.82
PPFIA3-209ENST00000602783 CSADQ9Y600 493 aa26.4■■□□□ 1.82
PPFIA3-209ENST00000602783 CRHR2Q13324 411 aa26.39■■□□□ 1.82
PPFIA3-209ENST00000602783 FKBP1CQ5VVH2 108 aa26.39■■□□□ 1.82
PPFIA3-209ENST00000602783 FAM83AQ86UY5 434 aa26.39■■□□□ 1.82
PPFIA3-209ENST00000602783 ARHGAP45Q92619 1136 aa26.39■■□□□ 1.82
PPFIA3-209ENST00000602783 PA2G4Q9UQ80 394 aaKnown RBP26.39■■□□□ 1.82
PPFIA3-209ENST00000602783 TRIM17Q9Y577 477 aa26.39■■□□□ 1.82
PPFIA3-209ENST00000602783 OTOFQ9HC10 1997 aa26.38■■□□□ 1.81
PPFIA3-209ENST00000602783 MEIS3Q99687 375 aa26.38■■□□□ 1.81
PPFIA3-209ENST00000602783 GNL3LQ9NVN8 582 aaKnown RBP26.38■■□□□ 1.81
PPFIA3-209ENST00000602783 IL15P40933 162 aaPredicted RBP26.37■■□□□ 1.81
PPFIA3-209ENST00000602783 LAMB1P07942 1786 aa26.37■■□□□ 1.81
PPFIA3-209ENST00000602783 GTF2A2P52657 109 aa26.36■■□□□ 1.81
PPFIA3-209ENST00000602783 BRI3BPQ8WY22 251 aa26.36■■□□□ 1.81
PPFIA3-209ENST00000602783 HOOK2Q96ED9 719 aa26.36■■□□□ 1.81
PPFIA3-209ENST00000602783 OTUD5Q96G74 571 aa26.36■■□□□ 1.81
PPFIA3-209ENST00000602783 CCL15-CCL14A0A0B4J2E2 113 aa26.35■■□□□ 1.81
PPFIA3-209ENST00000602783 PRDX5P30044 214 aa26.35■■□□□ 1.81
PPFIA3-209ENST00000602783 DIXDC1Q155Q3 683 aa26.35■■□□□ 1.81
PPFIA3-209ENST00000602783 CCL15Q16663 113 aa26.35■■□□□ 1.81
PPFIA3-209ENST00000602783 INTS3Q68E01 1043 aaKnown RBP26.35■■□□□ 1.81
PPFIA3-209ENST00000602783 OTOP1Q7RTM1 612 aa26.35■■□□□ 1.81
PPFIA3-209ENST00000602783 ERO1AQ96HE7 468 aa26.35■■□□□ 1.81
PPFIA3-209ENST00000602783 WRNIP1Q96S55 665 aa26.35■■□□□ 1.81
PPFIA3-209ENST00000602783 COPRSQ9NQ92 184 aa26.35■■□□□ 1.81
PPFIA3-209ENST00000602783 TNRC18O15417 2968 aaPredicted RBP26.34■■□□□ 1.81
PPFIA3-209ENST00000602783 BCAR3O75815 825 aa26.34■■□□□ 1.81
PPFIA3-209ENST00000602783 PHKA1P46020 1223 aa26.34■■□□□ 1.81
PPFIA3-209ENST00000602783 CD99L2Q8TCZ2 262 aa26.34■■□□□ 1.81
PPFIA3-209ENST00000602783 ZKSCAN4Q969J2 545 aaPredicted RBP26.34■■□□□ 1.81
PPFIA3-209ENST00000602783 DAGLAQ9Y4D2 1042 aa26.34■■□□□ 1.81
PPFIA3-209ENST00000602783 PDE4DIPQ5VU43 2346 aa26.33■■□□□ 1.81
PPFIA3-209ENST00000602783 LDHBP07195 334 aaKnown RBP26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms