RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 ANKRD36BQ8N2N9 1353 aa10.79□□□□□ -0.68
CSMD1-217ENST00000602723 CLUL1Q15846 466 aa10.79□□□□□ -0.68
CSMD1-217ENST00000602723 DCAF17Q5H9S7 520 aaPredicted RBP10.79□□□□□ -0.68
CSMD1-217ENST00000602723 NUF2Q9BZD4 464 aa10.79□□□□□ -0.68
CSMD1-217ENST00000602723 SARNPP82979 210 aaKnown RBP10.79□□□□□ -0.68
CSMD1-217ENST00000602723 TRAF1Q13077 416 aa10.79□□□□□ -0.68
CSMD1-217ENST00000602723 NEDD9Q14511 834 aa10.79□□□□□ -0.68
CSMD1-217ENST00000602723 NBPF6Q5VWK0 638 aa10.78□□□□□ -0.68
CSMD1-217ENST00000602723 NBPF5PQ86XG9 351 aaPredicted RBP10.78□□□□□ -0.68
CSMD1-217ENST00000602723 CEP120Q8N960 986 aa10.78□□□□□ -0.68
CSMD1-217ENST00000602723 MCUR1Q96AQ8 359 aa10.78□□□□□ -0.68
CSMD1-217ENST00000602723 NBPF4Q96M43 638 aa10.78□□□□□ -0.68
CSMD1-217ENST00000602723 TEX13AQ9BXU3 409 aaPredicted RBP10.78□□□□□ -0.68
CSMD1-217ENST00000602723 SMC5Q8IY18 1101 aa10.78□□□□□ -0.68
CSMD1-217ENST00000602723 IGSF22Q8N9C0 903 aa10.78□□□□□ -0.68
CSMD1-217ENST00000602723 RRP36Q96EU6 259 aaKnown RBP10.78□□□□□ -0.68
CSMD1-217ENST00000602723 SYNRGQ9UMZ2 1314 aa10.78□□□□□ -0.68
CSMD1-217ENST00000602723 IFT140Q96RY7 1462 aa10.78□□□□□ -0.68
CSMD1-217ENST00000602723 TBC1D31Q96DN5 1066 aa10.78□□□□□ -0.68
CSMD1-217ENST00000602723 CSRNP2Q9H175 543 aa10.78□□□□□ -0.68
CSMD1-217ENST00000602723 FEZ2Q9UHY8 353 aaPredicted RBP10.78□□□□□ -0.68
CSMD1-217ENST00000602723 NMIQ13287 307 aaPredicted RBP10.78□□□□□ -0.68
CSMD1-217ENST00000602723 UBL4BQ8N7F7 174 aa10.78□□□□□ -0.68
CSMD1-217ENST00000602723 IQUBQ8NA54 791 aa10.78□□□□□ -0.68
CSMD1-217ENST00000602723 PFDN4Q9NQP4 134 aa10.78□□□□□ -0.68
CSMD1-217ENST00000602723 FAM169AQ9Y6X4 670 aa10.78□□□□□ -0.68
CSMD1-217ENST00000602723 CASQ2O14958 399 aaPredicted RBP10.78□□□□□ -0.68
CSMD1-217ENST00000602723 C8orf74Q6P047 294 aa10.78□□□□□ -0.68
CSMD1-217ENST00000602723 SMARCC2Q8TAQ2 1214 aa10.78□□□□□ -0.68
CSMD1-217ENST00000602723 MYH10P35580 1976 aa10.78□□□□□ -0.68
CSMD1-217ENST00000602723 TNNI2P48788 182 aa10.78□□□□□ -0.68
CSMD1-217ENST00000602723 A6NNZ2 444 aa10.78□□□□□ -0.68
CSMD1-217ENST00000602723 TUBB8Q3ZCM7 444 aa10.78□□□□□ -0.68
CSMD1-217ENST00000602723 GKAP1Q5VSY0 366 aaPredicted RBP10.78□□□□□ -0.68
CSMD1-217ENST00000602723 ATP2B3Q16720 1220 aa10.77□□□□□ -0.68
CSMD1-217ENST00000602723 IFT20Q8IY31 132 aa10.77□□□□□ -0.68
CSMD1-217ENST00000602723 TTC41PQ6P2S7 1318 aa10.77□□□□□ -0.68
CSMD1-217ENST00000602723 KRT79Q5XKE5 535 aa10.77□□□□□ -0.68
CSMD1-217ENST00000602723 HDAC9Q9UKV0 1011 aa10.77□□□□□ -0.68
CSMD1-217ENST00000602723 ACTN4O43707 911 aaKnown RBP10.77□□□□□ -0.69
CSMD1-217ENST00000602723 TUBB2AQ13885 445 aa10.77□□□□□ -0.69
CSMD1-217ENST00000602723 TRIM14Q14142 442 aa10.77□□□□□ -0.69
CSMD1-217ENST00000602723 CCT6BQ92526 530 aa10.77□□□□□ -0.69
CSMD1-217ENST00000602723 TUBB2BQ9BVA1 445 aa10.77□□□□□ -0.69
CSMD1-217ENST00000602723 ZNF219Q9P2Y4 722 aaPredicted RBP10.77□□□□□ -0.69
CSMD1-217ENST00000602723 PCDHB15Q9Y5E8 787 aa10.77□□□□□ -0.69
CSMD1-217ENST00000602723 GOLGA6BA6NDN3 693 aa10.77□□□□□ -0.69
CSMD1-217ENST00000602723 ANKRD13DQ6ZTN6 518 aa10.77□□□□□ -0.69
CSMD1-217ENST00000602723 ZNF526Q8TF50 670 aaPredicted RBP10.77□□□□□ -0.69
CSMD1-217ENST00000602723 JARID2Q92833 1246 aaPredicted RBP10.77□□□□□ -0.69
CSMD1-217ENST00000602723 INTS4Q96HW7 963 aaKnown RBP10.77□□□□□ -0.69
CSMD1-217ENST00000602723 RPRD2Q5VT52 1461 aaKnown RBP10.77□□□□□ -0.69
CSMD1-217ENST00000602723 SNRPA1P09661 255 aaKnown RBP10.77□□□□□ -0.69
CSMD1-217ENST00000602723 GNAT2P19087 354 aa10.77□□□□□ -0.69
CSMD1-217ENST00000602723 CA8P35219 290 aa10.77□□□□□ -0.69
CSMD1-217ENST00000602723 CCDC170Q8IYT3 715 aa10.77□□□□□ -0.69
CSMD1-217ENST00000602723 PRXQ9BXM0 1461 aa10.77□□□□□ -0.69
CSMD1-217ENST00000602723 WASLO00401 505 aaPredicted RBP10.77□□□□□ -0.69
CSMD1-217ENST00000602723 GEN1Q17RS7 908 aa10.77□□□□□ -0.69
CSMD1-217ENST00000602723 RAPGEF1Q13905 1077 aa10.77□□□□□ -0.69
CSMD1-217ENST00000602723 TCHPQ9BT92 498 aa10.77□□□□□ -0.69
CSMD1-217ENST00000602723 PPP1R12CQ9BZL4 782 aa10.77□□□□□ -0.69
CSMD1-217ENST00000602723 ATL3Q6DD88 541 aa10.77□□□□□ -0.69
CSMD1-217ENST00000602723 VPS52Q8N1B4 723 aa10.77□□□□□ -0.69
CSMD1-217ENST00000602723 MEIS3Q99687 375 aa10.77□□□□□ -0.69
CSMD1-217ENST00000602723 GNA11P29992 359 aa10.76□□□□□ -0.69
CSMD1-217ENST00000602723 ARHGAP25P42331 645 aa10.76□□□□□ -0.69
CSMD1-217ENST00000602723 CYP26C1Q6V0L0 522 aa10.76□□□□□ -0.69
CSMD1-217ENST00000602723 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.76□□□□□ -0.69
CSMD1-217ENST00000602723 E7EVH7 732 aa10.76□□□□□ -0.69
CSMD1-217ENST00000602723 I3L4J1 428 aa10.76□□□□□ -0.69
CSMD1-217ENST00000602723 GIGYF1O75420 1035 aaPredicted RBP10.76□□□□□ -0.69
CSMD1-217ENST00000602723 RAPGEF3O95398 923 aa10.76□□□□□ -0.69
CSMD1-217ENST00000602723 ZNF131P52739 623 aa10.76□□□□□ -0.69
CSMD1-217ENST00000602723 MYL5Q02045 173 aa10.76□□□□□ -0.69
CSMD1-217ENST00000602723 NAA16Q6N069 864 aaPredicted RBP10.76□□□□□ -0.69
CSMD1-217ENST00000602723 VCXQ9H320 206 aa10.76□□□□□ -0.69
CSMD1-217ENST00000602723 SPOPO43791 374 aa10.76□□□□□ -0.69
CSMD1-217ENST00000602723 GRM8O00222 908 aa10.76□□□□□ -0.69
CSMD1-217ENST00000602723 AK2P54819 239 aa10.76□□□□□ -0.69
CSMD1-217ENST00000602723 NCBP1Q09161 790 aaKnown RBP10.76□□□□□ -0.69
CSMD1-217ENST00000602723 ELF2Q15723 593 aa10.76□□□□□ -0.69
CSMD1-217ENST00000602723 DTHD1Q6ZMT9 781 aa10.76□□□□□ -0.69
CSMD1-217ENST00000602723 NOX5Q96PH1 765 aa10.76□□□□□ -0.69
CSMD1-217ENST00000602723 EPB41P11171 864 aaKnown RBP10.76□□□□□ -0.69
CSMD1-217ENST00000602723 RPL13P26373 211 aaKnown RBP10.76□□□□□ -0.69
CSMD1-217ENST00000602723 ST5P78524 1137 aa10.76□□□□□ -0.69
CSMD1-217ENST00000602723 C8orf34Q49A92 452 aa10.76□□□□□ -0.69
CSMD1-217ENST00000602723 RUFY3Q7L099 469 aa10.76□□□□□ -0.69
CSMD1-217ENST00000602723 ANKRD44Q8N8A2 993 aa10.76□□□□□ -0.69
CSMD1-217ENST00000602723 KIFAP3Q92845 792 aa10.76□□□□□ -0.69
CSMD1-217ENST00000602723 CREB3L3Q68CJ9 461 aa10.76□□□□□ -0.69
CSMD1-217ENST00000602723 TTC36A6NLP5 189 aa10.76□□□□□ -0.69
CSMD1-217ENST00000602723 FAM212AQ96EL1 285 aa10.76□□□□□ -0.69
CSMD1-217ENST00000602723 U2AF2P26368 475 aaKnown RBP eCLIP10.76□□□□□ -0.69
CSMD1-217ENST00000602723 SLC9C2Q5TAH2 1124 aa10.76□□□□□ -0.69
CSMD1-217ENST00000602723 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.76□□□□□ -0.69
CSMD1-217ENST00000602723 KRT5P13647 590 aa10.76□□□□□ -0.69
CSMD1-217ENST00000602723 VWA3BQ502W6 1294 aa10.76□□□□□ -0.69
CSMD1-217ENST00000602723 KIFC2Q96AC6 838 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms