RNA–Protein interactions for RNA: ENST00000602164.5

USF2-215, Transcript of upstream transcription factor 2, c-fos interacting, human

TSL 3

Gene USF2, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USF2-215	ENST00000602164	KLRG1	Q96E93	195 aa		33	■■■□□ 2.87
USF2-215	ENST00000602164	MRI	Q9BWK5	157 aa		33	■■■□□ 2.87
USF2-215	ENST00000602164	HMG20B	Q9P0W2	317 aa		33	■■■□□ 2.87
USF2-215	ENST00000602164	PI16	Q6UXB8	463 aa		32.99	■■■□□ 2.87
USF2-215	ENST00000602164	CDCA5	Q96FF9	252 aa		32.99	■■■□□ 2.87
USF2-215	ENST00000602164	MAST3	O60307	1309 aa		32.99	■■■□□ 2.87
USF2-215	ENST00000602164	MCAM	P43121	646 aa		32.98	■■■□□ 2.87
USF2-215	ENST00000602164	RBM5	P52756	815 aa	Known RBP eCLIP	32.98	■■■□□ 2.87
USF2-215	ENST00000602164	APOBEC3F	Q8IUX4	373 aa	Known RBP	32.98	■■■□□ 2.87
USF2-215	ENST00000602164	PCDHB15	Q9Y5E8	787 aa		32.98	■■■□□ 2.87
USF2-215	ENST00000602164	CNTNAP1	P78357	1384 aa		32.97	■■■□□ 2.87
USF2-215	ENST00000602164	AKAP11	Q9UKA4	1901 aa		32.97	■■■□□ 2.87
USF2-215	ENST00000602164	TEKT1	Q969V4	418 aa		32.97	■■■□□ 2.87
USF2-215	ENST00000602164	KIF1BP	Q96EK5	621 aa		32.97	■■■□□ 2.87
USF2-215	ENST00000602164	CCDC8	Q9H0W5	538 aa	Predicted RBP	32.97	■■■□□ 2.87
USF2-215	ENST00000602164	ZNF408	Q9H9D4	720 aa		32.97	■■■□□ 2.87
USF2-215	ENST00000602164	IL1RAPL2	Q9NP60	686 aa		32.97	■■■□□ 2.87
USF2-215	ENST00000602164	CLRN2	A0PK11	232 aa		32.96	■■■□□ 2.87
USF2-215	ENST00000602164	RASSF10	A6NK89	507 aa		32.96	■■■□□ 2.87
USF2-215	ENST00000602164	RAB11FIP3	O75154	756 aa		32.96	■■■□□ 2.87
USF2-215	ENST00000602164	UQCRFS1P1	P0C7P4	283 aa		32.96	■■■□□ 2.87
USF2-215	ENST00000602164	SPATA5	Q8NB90	893 aa		32.96	■■■□□ 2.87
USF2-215	ENST00000602164	ZNF512B	Q96KM6	892 aa	Predicted RBP	32.96	■■■□□ 2.87
USF2-215	ENST00000602164	TLL2	Q9Y6L7	1015 aa		32.96	■■■□□ 2.87
USF2-215	ENST00000602164	SPDYE2	Q495Y8	402 aa		32.95	■■■□□ 2.87
USF2-215	ENST00000602164	HHIPL2	Q6UWX4	724 aa		32.95	■■■□□ 2.87
USF2-215	ENST00000602164	ZDHHC15	Q96MV8	337 aa		32.95	■■■□□ 2.87
USF2-215	ENST00000602164	LDHB	P07195	334 aa	Known RBP	32.94	■■■□□ 2.86
USF2-215	ENST00000602164	AACS	Q86V21	672 aa		32.94	■■■□□ 2.86
USF2-215	ENST00000602164	ZGPAT	Q8N5A5	531 aa	Known RBP	32.94	■■■□□ 2.86
USF2-215	ENST00000602164	APBB1	O00213	710 aa		32.93	■■■□□ 2.86
USF2-215	ENST00000602164	MYO1B	O43795	1136 aa		32.93	■■■□□ 2.86
USF2-215	ENST00000602164	DIXDC1	Q155Q3	683 aa		32.93	■■■□□ 2.86
USF2-215	ENST00000602164	CCDC158	Q5M9N0	1113 aa		32.93	■■■□□ 2.86
USF2-215	ENST00000602164	TTC39A	Q5SRH9	613 aa		32.93	■■■□□ 2.86
USF2-215	ENST00000602164	APOBEC3H	Q6NTF7	200 aa	Known RBP	32.93	■■■□□ 2.86
USF2-215	ENST00000602164	TDRD3	Q9H7E2	651 aa	Known RBP	32.93	■■■□□ 2.86
USF2-215	ENST00000602164	ZNF70	Q9UC06	446 aa	Predicted RBP	32.93	■■■□□ 2.86
USF2-215	ENST00000602164	MKRN1	Q9UHC7	482 aa	Known RBP	32.93	■■■□□ 2.86
USF2-215	ENST00000602164	ABT1	Q9ULW3	272 aa	Known RBP	32.93	■■■□□ 2.86
USF2-215	ENST00000602164	PRAMEF18	Q5VWM3	479 aa		32.92	■■■□□ 2.86
USF2-215	ENST00000602164	SAPCD2	Q86UD0	394 aa		32.92	■■■□□ 2.86
USF2-215	ENST00000602164	GBA2	Q9HCG7	927 aa	Predicted RBP	32.91	■■■□□ 2.86
USF2-215	ENST00000602164	DAGLA	Q9Y4D2	1042 aa		32.91	■■■□□ 2.86
USF2-215	ENST00000602164	SUPT16H	Q9Y5B9	1047 aa	Known RBP	32.91	■■■□□ 2.86
USF2-215	ENST00000602164	DCTPP1	Q9H773	170 aa		32.9	■■■□□ 2.86
USF2-215	ENST00000602164	VEZT	Q9HBM0	779 aa		32.9	■■■□□ 2.86
USF2-215	ENST00000602164	ABCF2	Q9UG63	623 aa		32.9	■■■□□ 2.86
USF2-215	ENST00000602164	PAPPA2	Q9BXP8	1791 aa		32.89	■■■□□ 2.86
USF2-215	ENST00000602164	CLASRP	Q8N2M8	674 aa	Known RBP	32.89	■■■□□ 2.86
USF2-215	ENST00000602164	JMY	Q8N9B5	988 aa		32.89	■■■□□ 2.86
USF2-215	ENST00000602164	DEFB129	Q9H1M3	183 aa		32.89	■■■□□ 2.86
USF2-215	ENST00000602164	TBC1D9	Q6ZT07	1266 aa		32.88	■■■□□ 2.85
USF2-215	ENST00000602164	ZNF384	Q8TF68	577 aa		32.88	■■■□□ 2.85
USF2-215	ENST00000602164	SNRK	Q9NRH2	765 aa		32.88	■■■□□ 2.85
USF2-215	ENST00000602164	PPP2R3B	Q9Y5P8	575 aa		32.88	■■■□□ 2.85
USF2-215	ENST00000602164	SSC5D	A1L4H1	1573 aa		32.87	■■■□□ 2.85
USF2-215	ENST00000602164	GAK	O14976	1311 aa		32.87	■■■□□ 2.85
USF2-215	ENST00000602164	DEFB115	Q30KQ5	88 aa		32.87	■■■□□ 2.85
USF2-215	ENST00000602164	SPTY2D1	Q68D10	685 aa	Predicted RBP	32.87	■■■□□ 2.85
USF2-215	ENST00000602164	MYH2	Q9UKX2	1941 aa		32.87	■■■□□ 2.85
USF2-215	ENST00000602164	HHIPL1	Q96JK4	782 aa		32.86	■■■□□ 2.85
USF2-215	ENST00000602164	MAST2	Q6P0Q8	1798 aa		32.86	■■■□□ 2.85
USF2-215	ENST00000602164	THSD7B	Q9C0I4	1608 aa		32.85	■■■□□ 2.85
USF2-215	ENST00000602164	VEGFB	P49765	207 aa		32.85	■■■□□ 2.85
USF2-215	ENST00000602164	ERICH6	Q7L0X2	663 aa		32.85	■■■□□ 2.85
USF2-215	ENST00000602164	C2orf69	Q8N8R5	385 aa		32.85	■■■□□ 2.85
USF2-215	ENST00000602164	LRRCC1	Q9C099	1032 aa		32.85	■■■□□ 2.85
USF2-215	ENST00000602164	CYP2E1	P05181	493 aa	Predicted RBP	32.84	■■■□□ 2.85
USF2-215	ENST00000602164	ZAP70	P43403	619 aa		32.84	■■■□□ 2.85
USF2-215	ENST00000602164	MECOM	Q03112	1051 aa		32.84	■■■□□ 2.85
USF2-215	ENST00000602164	RASA3	Q14644	834 aa		32.84	■■■□□ 2.85
USF2-215	ENST00000602164	DZIP1	Q86YF9	867 aa	Known RBP	32.84	■■■□□ 2.85
USF2-215	ENST00000602164	CACNB3	P54284	484 aa		32.83	■■■□□ 2.85
USF2-215	ENST00000602164	TNFAIP1	Q13829	316 aa		32.83	■■■□□ 2.85
USF2-215	ENST00000602164	FAM163A	Q96GL9	167 aa	Predicted RBP	32.83	■■■□□ 2.85
USF2-215	ENST00000602164	HUNK	P57058	714 aa		32.82	■■■□□ 2.84
USF2-215	ENST00000602164	FKBP1B	P68106	108 aa		32.82	■■■□□ 2.84
USF2-215	ENST00000602164	AAMP	Q13685	434 aa		32.82	■■■□□ 2.84
USF2-215	ENST00000602164	EXOC6	Q8TAG9	804 aa		32.82	■■■□□ 2.84
USF2-215	ENST00000602164	NSUN4	Q96CB9	384 aa	Known RBP	32.82	■■■□□ 2.84
USF2-215	ENST00000602164	MYO5A	Q9Y4I1	1855 aa	Known RBP	32.82	■■■□□ 2.84
USF2-215	ENST00000602164	TCP10L2	B9ZVM9	353 aa		32.81	■■■□□ 2.84
USF2-215	ENST00000602164	SMARCA5	O60264	1052 aa	Predicted RBP	32.81	■■■□□ 2.84
USF2-215	ENST00000602164	IFIT2	P09913	472 aa	Known RBP	32.81	■■■□□ 2.84
USF2-215	ENST00000602164	FKBP1C	Q5VVH2	108 aa		32.81	■■■□□ 2.84
USF2-215	ENST00000602164	CDC42EP5	Q6NZY7	148 aa		32.81	■■■□□ 2.84
USF2-215	ENST00000602164	MROH7-TTC4	A0A0A0MT08	1334 aa		32.8	■■■□□ 2.84
USF2-215	ENST00000602164	CYP4F22	Q6NT55	531 aa		32.8	■■■□□ 2.84
USF2-215	ENST00000602164	MOB2	Q70IA6	237 aa		32.8	■■■□□ 2.84
USF2-215	ENST00000602164	TEPSIN	Q96N21	525 aa		32.8	■■■□□ 2.84
USF2-215	ENST00000602164	PIH1D3	Q9NQM4	214 aa	Known RBP	32.8	■■■□□ 2.84
USF2-215	ENST00000602164	DOCK2	Q92608	1830 aa		32.79	■■■□□ 2.84
USF2-215	ENST00000602164	CDAN1	Q8IWY9	1227 aa		32.79	■■■□□ 2.84
USF2-215	ENST00000602164	CAPNS2	Q96L46	248 aa		32.79	■■■□□ 2.84
USF2-215	ENST00000602164	NDUFB9	Q9Y6M9	179 aa		32.79	■■■□□ 2.84
USF2-215	ENST00000602164	RFX7	Q2KHR2	1363 aa		32.79	■■■□□ 2.84
USF2-215	ENST00000602164	WDR33	Q9C0J8	1336 aa	Known RBP	32.78	■■■□□ 2.84
USF2-215	ENST00000602164	NF2	P35240	595 aa		32.78	■■■□□ 2.84
USF2-215	ENST00000602164	NBPF12	Q5TAG4	269 aa	Predicted RBP	32.78	■■■□□ 2.84

Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms