RNA–Protein interactions for RNA: ENST00000602056.1

GTPBP3-227, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 2

Gene GTPBP3, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-227ENST00000602056 ZBTB48P10074 688 aaPredicted RBP29.19■■■□□ 2.26
GTPBP3-227ENST00000602056 FGFR2P21802 821 aa29.19■■■□□ 2.26
GTPBP3-227ENST00000602056 IFNL1Q8IU54 200 aa29.19■■■□□ 2.26
GTPBP3-227ENST00000602056 IGF2BP3O00425 579 aaKnown RBP eCLIP29.18■■■□□ 2.26
GTPBP3-227ENST00000602056 IREB2P48200 963 aaKnown RBP29.17■■■□□ 2.26
GTPBP3-227ENST00000602056 TNFAIP1Q13829 316 aa29.17■■■□□ 2.26
GTPBP3-227ENST00000602056 PKN2Q16513 984 aaKnown RBP29.17■■■□□ 2.26
GTPBP3-227ENST00000602056 CAVIN4Q5BKX8 364 aa29.17■■■□□ 2.26
GTPBP3-227ENST00000602056 SMC4Q9NTJ3 1288 aa29.17■■■□□ 2.26
GTPBP3-227ENST00000602056 TCP10L2B9ZVM9 353 aa29.16■■■□□ 2.26
GTPBP3-227ENST00000602056 FKTNO75072 461 aa29.16■■■□□ 2.26
GTPBP3-227ENST00000602056 INHBEP58166 350 aa29.16■■■□□ 2.26
GTPBP3-227ENST00000602056 TMEM39BQ9GZU3 492 aa29.16■■■□□ 2.26
GTPBP3-227ENST00000602056 ECM29Q5VYK3 1845 aa29.15■■■□□ 2.26
GTPBP3-227ENST00000602056 ALDH1A1P00352 501 aa29.15■■■□□ 2.26
GTPBP3-227ENST00000602056 ANKRD13AQ8IZ07 590 aa29.15■■■□□ 2.26
GTPBP3-227ENST00000602056 TBC1D22AQ8WUA7 517 aa29.15■■■□□ 2.26
GTPBP3-227ENST00000602056 EYA2O00167 538 aa29.14■■■□□ 2.26
GTPBP3-227ENST00000602056 HDLBPQ00341 1268 aaKnown RBP29.14■■■□□ 2.26
GTPBP3-227ENST00000602056 PUM3Q15397 648 aaKnown RBP29.14■■■□□ 2.26
GTPBP3-227ENST00000602056 FRAT2O75474 233 aaPredicted RBP29.13■■■□□ 2.25
GTPBP3-227ENST00000602056 ATG9AQ7Z3C6 839 aa29.13■■■□□ 2.25
GTPBP3-227ENST00000602056 KIF16BQ96L93 1317 aa29.13■■■□□ 2.25
GTPBP3-227ENST00000602056 CACNB3P54284 484 aa29.12■■■□□ 2.25
GTPBP3-227ENST00000602056 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.12■■■□□ 2.25
GTPBP3-227ENST00000602056 PTPN18Q99952 460 aa29.12■■■□□ 2.25
GTPBP3-227ENST00000602056 ELP3Q9H9T3 547 aa29.12■■■□□ 2.25
GTPBP3-227ENST00000602056 IFIT1P09914 478 aaKnown RBP29.11■■■□□ 2.25
GTPBP3-227ENST00000602056 APOBEC3HQ6NTF7 200 aaKnown RBP29.11■■■□□ 2.25
GTPBP3-227ENST00000602056 CNKSR2Q8WXI2 1034 aa29.11■■■□□ 2.25
GTPBP3-227ENST00000602056 TEKT1Q969V4 418 aa29.11■■■□□ 2.25
GTPBP3-227ENST00000602056 MRIQ9BWK5 157 aa29.11■■■□□ 2.25
GTPBP3-227ENST00000602056 NOB1Q9ULX3 412 aaKnown RBP29.11■■■□□ 2.25
GTPBP3-227ENST00000602056 TESPA1A2RU30 521 aaPredicted RBP29.1■■■□□ 2.25
GTPBP3-227ENST00000602056 FBXO46Q6PJ61 603 aaPredicted RBP29.1■■■□□ 2.25
GTPBP3-227ENST00000602056 ZDHHC15Q96MV8 337 aa29.1■■■□□ 2.25
GTPBP3-227ENST00000602056 ARAP2Q8WZ64 1704 aa29.09■■■□□ 2.25
GTPBP3-227ENST00000602056 LPIN2Q92539 896 aa29.09■■■□□ 2.25
GTPBP3-227ENST00000602056 OPTNQ96CV9 577 aa29.09■■■□□ 2.25
GTPBP3-227ENST00000602056 TNNI2P48788 182 aa29.08■■■□□ 2.25
GTPBP3-227ENST00000602056 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.08■■■□□ 2.25
GTPBP3-227ENST00000602056 MS4A4AQ96JQ5 239 aa29.08■■■□□ 2.25
GTPBP3-227ENST00000602056 UBTFL1P0CB47 393 aaPredicted RBP29.07■■■□□ 2.24
GTPBP3-227ENST00000602056 SLC5A1P13866 664 aa29.07■■■□□ 2.24
GTPBP3-227ENST00000602056 VGLL4Q14135 290 aa29.07■■■□□ 2.24
GTPBP3-227ENST00000602056 SUGT1Q9Y2Z0 365 aa29.07■■■□□ 2.24
GTPBP3-227ENST00000602056 CT47B1P0C2W7 299 aaPredicted RBP29.06■■■□□ 2.24
GTPBP3-227ENST00000602056 MAP3K9P80192 1104 aa29.06■■■□□ 2.24
GTPBP3-227ENST00000602056 CRHR2Q13324 411 aa29.06■■■□□ 2.24
GTPBP3-227ENST00000602056 SIL1Q9H173 461 aa29.06■■■□□ 2.24
GTPBP3-227ENST00000602056 CIAO1O76071 339 aa29.04■■■□□ 2.24
GTPBP3-227ENST00000602056 HHIPL2Q6UWX4 724 aa29.04■■■□□ 2.24
GTPBP3-227ENST00000602056 BRI3BPQ8WY22 251 aa29.04■■■□□ 2.24
GTPBP3-227ENST00000602056 LRRFIP2Q9Y608 721 aaKnown RBP29.04■■■□□ 2.24
GTPBP3-227ENST00000602056 CAP1Q01518 475 aa29.03■■■□□ 2.24
GTPBP3-227ENST00000602056 FKBP1CQ5VVH2 108 aa29.03■■■□□ 2.24
GTPBP3-227ENST00000602056 OTOP1Q7RTM1 612 aa29.03■■■□□ 2.24
GTPBP3-227ENST00000602056 FAM83AQ86UY5 434 aa29.03■■■□□ 2.24
GTPBP3-227ENST00000602056 API5Q9BZZ5 524 aaKnown RBP29.03■■■□□ 2.24
GTPBP3-227ENST00000602056 TRIM17Q9Y577 477 aa29.03■■■□□ 2.24
GTPBP3-227ENST00000602056 MAST3O60307 1309 aa29.02■■■□□ 2.24
GTPBP3-227ENST00000602056 RARSP54136 660 aaKnown RBP29.02■■■□□ 2.24
GTPBP3-227ENST00000602056 OTUD7BQ6GQQ9 843 aa29.02■■■□□ 2.24
GTPBP3-227ENST00000602056 WDR66Q8TBY9 1149 aa29.02■■■□□ 2.24
GTPBP3-227ENST00000602056 MEIS3Q99687 375 aa29.02■■■□□ 2.24
GTPBP3-227ENST00000602056 FBXO3Q9UK99 471 aa29.02■■■□□ 2.24
GTPBP3-227ENST00000602056 PA2G4Q9UQ80 394 aaKnown RBP29.02■■■□□ 2.24
GTPBP3-227ENST00000602056 OTOFQ9HC10 1997 aa29.01■■■□□ 2.23
GTPBP3-227ENST00000602056 ATP2B3Q16720 1220 aa29.01■■■□□ 2.23
GTPBP3-227ENST00000602056 CEP126Q9P2H0 1117 aa29.01■■■□□ 2.23
GTPBP3-227ENST00000602056 SNCAIPQ9Y6H5 919 aa29.01■■■□□ 2.23
GTPBP3-227ENST00000602056 LAMB1P07942 1786 aa29.01■■■□□ 2.23
GTPBP3-227ENST00000602056 CCER2I3L3R5 266 aa29■■■□□ 2.23
GTPBP3-227ENST00000602056 CD99L2Q8TCZ2 262 aa29■■■□□ 2.23
GTPBP3-227ENST00000602056 OTUD5Q96G74 571 aa29■■■□□ 2.23
GTPBP3-227ENST00000602056 TMOD2Q9NZR1 351 aa29■■■□□ 2.23
GTPBP3-227ENST00000602056 CSADQ9Y600 493 aa29■■■□□ 2.23
GTPBP3-227ENST00000602056 DIXDC1Q155Q3 683 aa28.99■■■□□ 2.23
GTPBP3-227ENST00000602056 DAGLAQ9Y4D2 1042 aa28.99■■■□□ 2.23
GTPBP3-227ENST00000602056 CCL15-CCL14A0A0B4J2E2 113 aa28.98■■■□□ 2.23
GTPBP3-227ENST00000602056 SPDYE5A6NIY4 337 aa28.98■■■□□ 2.23
GTPBP3-227ENST00000602056 PRDX5P30044 214 aa28.98■■■□□ 2.23
GTPBP3-227ENST00000602056 PHKA1P46020 1223 aa28.98■■■□□ 2.23
GTPBP3-227ENST00000602056 CCL15Q16663 113 aa28.98■■■□□ 2.23
GTPBP3-227ENST00000602056 ZKSCAN4Q969J2 545 aaPredicted RBP28.98■■■□□ 2.23
GTPBP3-227ENST00000602056 IL15P40933 162 aaPredicted RBP28.97■■■□□ 2.23
GTPBP3-227ENST00000602056 GTF2A2P52657 109 aa28.97■■■□□ 2.23
GTPBP3-227ENST00000602056 FAM43AQ8N2R8 423 aa28.97■■■□□ 2.23
GTPBP3-227ENST00000602056 ERO1AQ96HE7 468 aa28.97■■■□□ 2.23
GTPBP3-227ENST00000602056 WRNIP1Q96S55 665 aa28.97■■■□□ 2.23
GTPBP3-227ENST00000602056 COPRSQ9NQ92 184 aa28.97■■■□□ 2.23
GTPBP3-227ENST00000602056 TNRC18O15417 2968 aaPredicted RBP28.97■■■□□ 2.23
GTPBP3-227ENST00000602056 ADORA1P30542 326 aa28.96■■■□□ 2.23
GTPBP3-227ENST00000602056 CDC42EP5Q6NZY7 148 aa28.96■■■□□ 2.23
GTPBP3-227ENST00000602056 RPAP1Q9BWH6 1393 aaPredicted RBP28.96■■■□□ 2.23
GTPBP3-227ENST00000602056 SP3Q02447 781 aa28.95■■■□□ 2.22
GTPBP3-227ENST00000602056 NFIAQ12857 509 aa28.95■■■□□ 2.22
GTPBP3-227ENST00000602056 INTS3Q68E01 1043 aaKnown RBP28.95■■■□□ 2.22
GTPBP3-227ENST00000602056 MIGA2Q7L4E1 593 aa28.95■■■□□ 2.22
GTPBP3-227ENST00000602056 PDE4DIPQ5VU43 2346 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms