RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 KLRG1Q96E93 195 aa17.63■□□□□ 0.41
USE1-210ENST00000601662 CCDC8Q9H0W5 538 aaPredicted RBP17.63■□□□□ 0.41
USE1-210ENST00000601662 STAP2Q9UGK3 403 aa17.63■□□□□ 0.41
USE1-210ENST00000601662 TTF2Q9UNY4 1162 aaKnown RBP17.63■□□□□ 0.41
USE1-210ENST00000601662 PCDHAC2Q9Y5I4 1007 aa17.63■□□□□ 0.41
USE1-210ENST00000601662 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.63■□□□□ 0.41
USE1-210ENST00000601662 TTC41PQ6P2S7 1318 aa17.63■□□□□ 0.41
USE1-210ENST00000601662 ERC2O15083 957 aa17.62■□□□□ 0.41
USE1-210ENST00000601662 MX1P20591 662 aa17.62■□□□□ 0.41
USE1-210ENST00000601662 PDE4AP27815 886 aa17.62■□□□□ 0.41
USE1-210ENST00000601662 PHKA1P46020 1223 aa17.62■□□□□ 0.41
USE1-210ENST00000601662 CCDC158Q5M9N0 1113 aa17.62■□□□□ 0.41
USE1-210ENST00000601662 OSBPL3Q9H4L5 887 aa17.62■□□□□ 0.41
USE1-210ENST00000601662 GNL3LQ9NVN8 582 aaKnown RBP17.62■□□□□ 0.41
USE1-210ENST00000601662 ZNF646O15015 1829 aaPredicted RBP17.61■□□□□ 0.41
USE1-210ENST00000601662 RGS3P49796 1198 aa17.61■□□□□ 0.41
USE1-210ENST00000601662 MMP14P50281 582 aa17.61■□□□□ 0.41
USE1-210ENST00000601662 PDE1AP54750 535 aa17.61■□□□□ 0.41
USE1-210ENST00000601662 GRIK5Q16478 980 aa17.61■□□□□ 0.41
USE1-210ENST00000601662 CFAP100Q494V2 611 aa17.61■□□□□ 0.41
USE1-210ENST00000601662 PAXIP1Q6ZW49 1069 aaPredicted RBP17.61■□□□□ 0.41
USE1-210ENST00000601662 XAGE2Q96GT9 111 aa17.61■□□□□ 0.41
USE1-210ENST00000601662 ECHDC1Q9NTX5 307 aa17.61■□□□□ 0.41
USE1-210ENST00000601662 AOX1Q06278 1338 aa17.61■□□□□ 0.41
USE1-210ENST00000601662 CCDC102BQ68D86 513 aa17.6■□□□□ 0.41
USE1-210ENST00000601662 TBC1D22AQ8WUA7 517 aa17.6■□□□□ 0.41
USE1-210ENST00000601662 DBNDD2Q9BQY9 259 aa17.6■□□□□ 0.41
USE1-210ENST00000601662 DBNLQ9UJU6 430 aaKnown RBP17.6■□□□□ 0.41
USE1-210ENST00000601662 SALL3Q9BXA9 1300 aa17.6■□□□□ 0.41
USE1-210ENST00000601662 GLRX3O76003 335 aaKnown RBP17.59■□□□□ 0.41
USE1-210ENST00000601662 GRM1Q13255 1194 aa17.59■□□□□ 0.41
USE1-210ENST00000601662 PRAMEF18Q5VWM3 479 aa17.59■□□□□ 0.41
USE1-210ENST00000601662 OTUD7AQ8TE49 926 aaPredicted RBP17.59■□□□□ 0.41
USE1-210ENST00000601662 ZNF512BQ96KM6 892 aaPredicted RBP17.59■□□□□ 0.41
USE1-210ENST00000601662 PRMT6Q96LA8 375 aaPredicted RBP17.59■□□□□ 0.41
USE1-210ENST00000601662 CLRN2A0PK11 232 aa17.58■□□□□ 0.4
USE1-210ENST00000601662 UQCRFS1P1P0C7P4 283 aa17.58■□□□□ 0.4
USE1-210ENST00000601662 ATP5JP18859 108 aa17.58■□□□□ 0.4
USE1-210ENST00000601662 DEFB115Q30KQ5 88 aa17.58■□□□□ 0.4
USE1-210ENST00000601662 WDR66Q8TBY9 1149 aa17.58■□□□□ 0.4
USE1-210ENST00000601662 CDCA5Q96FF9 252 aa17.58■□□□□ 0.4
USE1-210ENST00000601662 ZBED3Q96IU2 234 aaPredicted RBP17.58■□□□□ 0.4
USE1-210ENST00000601662 TRPM7Q96QT4 1865 aa17.57■□□□□ 0.4
USE1-210ENST00000601662 PITPNM2Q9BZ72 1349 aa17.57■□□□□ 0.4
USE1-210ENST00000601662 SPDYE2BA6NHP3 402 aa17.57■□□□□ 0.4
USE1-210ENST00000601662 MYO1BO43795 1136 aa17.57■□□□□ 0.4
USE1-210ENST00000601662 SPDYE6P0CI01 402 aa17.57■□□□□ 0.4
USE1-210ENST00000601662 CRKP46108 304 aa17.57■□□□□ 0.4
USE1-210ENST00000601662 TTC39AQ5SRH9 613 aa17.57■□□□□ 0.4
USE1-210ENST00000601662 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.57■□□□□ 0.4
USE1-210ENST00000601662 VEZTQ9HBM0 779 aa17.57■□□□□ 0.4
USE1-210ENST00000601662 TLR7Q9NYK1 1049 aaKnown RBP17.57■□□□□ 0.4
USE1-210ENST00000601662 DENND2AQ9ULE3 1009 aa17.57■□□□□ 0.4
USE1-210ENST00000601662 ZBTB22O15209 634 aa17.56■□□□□ 0.4
USE1-210ENST00000601662 VEGFBP49765 207 aa17.56■□□□□ 0.4
USE1-210ENST00000601662 MTMR14Q8NCE2 650 aa17.56■□□□□ 0.4
USE1-210ENST00000601662 CNTNAP1P78357 1384 aa17.55■□□□□ 0.4
USE1-210ENST00000601662 RASSF10A6NK89 507 aa17.55■□□□□ 0.4
USE1-210ENST00000601662 RASGRF1Q13972 1273 aa17.55■□□□□ 0.4
USE1-210ENST00000601662 APOBEC3FQ8IUX4 373 aaKnown RBP17.55■□□□□ 0.4
USE1-210ENST00000601662 C2orf69Q8N8R5 385 aa17.55■□□□□ 0.4
USE1-210ENST00000601662 TDRD3Q9H7E2 651 aaKnown RBP17.55■□□□□ 0.4
USE1-210ENST00000601662 GBA2Q9HCG7 927 aaPredicted RBP17.55■□□□□ 0.4
USE1-210ENST00000601662 SERPINA10Q9UK55 444 aa17.55■□□□□ 0.4
USE1-210ENST00000601662 TLL2Q9Y6L7 1015 aa17.55■□□□□ 0.4
USE1-210ENST00000601662 COL1A1P02452 1464 aaPredicted RBP17.55■□□□□ 0.4
USE1-210ENST00000601662 SEMA3EO15041 775 aa17.54■□□□□ 0.4
USE1-210ENST00000601662 HUNKP57058 714 aa17.54■□□□□ 0.4
USE1-210ENST00000601662 TTC22Q5TAA0 569 aa17.54■□□□□ 0.4
USE1-210ENST00000601662 CYP4F22Q6NT55 531 aa17.54■□□□□ 0.4
USE1-210ENST00000601662 SAPCD2Q86UD0 394 aa17.54■□□□□ 0.4
USE1-210ENST00000601662 SKAP1Q86WV1 359 aa17.54■□□□□ 0.4
USE1-210ENST00000601662 PI4K2BQ8TCG2 481 aa17.54■□□□□ 0.4
USE1-210ENST00000601662 TEKT1Q969V4 418 aa17.54■□□□□ 0.4
USE1-210ENST00000601662 LDHBP07195 334 aaKnown RBP17.53■□□□□ 0.4
USE1-210ENST00000601662 ARID4AP29374 1257 aaPredicted RBP17.53■□□□□ 0.4
USE1-210ENST00000601662 PRDX5P30044 214 aa17.53■□□□□ 0.4
USE1-210ENST00000601662 TTLL12Q14166 644 aaPredicted RBP17.53■□□□□ 0.4
USE1-210ENST00000601662 BMP2KLQ5H9B9 411 aa17.53■□□□□ 0.4
USE1-210ENST00000601662 HAUS7Q99871 368 aa17.53■□□□□ 0.4
USE1-210ENST00000601662 ZNF70Q9UC06 446 aaPredicted RBP17.53■□□□□ 0.4
USE1-210ENST00000601662 ABCF2Q9UG63 623 aa17.53■□□□□ 0.4
USE1-210ENST00000601662 MAST3O60307 1309 aa17.52■□□□□ 0.4
USE1-210ENST00000601662 HDLBPQ00341 1268 aaKnown RBP17.52■□□□□ 0.4
USE1-210ENST00000601662 PRKG1Q13976 671 aa17.52■□□□□ 0.4
USE1-210ENST00000601662 PI16Q6UXB8 463 aa17.52■□□□□ 0.4
USE1-210ENST00000601662 JMYQ8N9B5 988 aa17.52■□□□□ 0.4
USE1-210ENST00000601662 CAPNS2Q96L46 248 aa17.52■□□□□ 0.4
USE1-210ENST00000601662 DEFB129Q9H1M3 183 aa17.52■□□□□ 0.4
USE1-210ENST00000601662 BOLA2Q9H3K6 86 aa17.52■□□□□ 0.4
USE1-210ENST00000601662 SUGT1Q9Y2Z0 365 aa17.52■□□□□ 0.4
USE1-210ENST00000601662 MYH13Q9UKX3 1938 aa17.52■□□□□ 0.4
USE1-210ENST00000601662 WDR33Q9C0J8 1336 aaKnown RBP17.51■□□□□ 0.39
USE1-210ENST00000601662 DIXDC1Q155Q3 683 aa17.51■□□□□ 0.39
USE1-210ENST00000601662 TSHZ3Q63HK5 1081 aa17.51■□□□□ 0.39
USE1-210ENST00000601662 MOB2Q70IA6 237 aa17.51■□□□□ 0.39
USE1-210ENST00000601662 TICAM2Q86XR7 235 aa17.51■□□□□ 0.39
USE1-210ENST00000601662 SNRKQ9NRH2 765 aa17.51■□□□□ 0.39
USE1-210ENST00000601662 HMG20BQ9P0W2 317 aa17.51■□□□□ 0.39
USE1-210ENST00000601662 TRIM6-TRIM34B2RNG4 842 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms