RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 CEP120Q8N960 986 aa7.06□□□□□ -1.28
VRK3-222ENST00000601324 SPACA7Q96KW9 195 aa7.06□□□□□ -1.28
VRK3-222ENST00000601324 RBSNQ9H1K0 784 aa7.06□□□□□ -1.28
VRK3-222ENST00000601324 NPHS2Q9NP85 383 aa7.06□□□□□ -1.28
VRK3-222ENST00000601324 NAGPAQ9UK23 515 aa7.06□□□□□ -1.28
VRK3-222ENST00000601324 FMN1Q68DA7 1419 aa7.06□□□□□ -1.28
VRK3-222ENST00000601324 MIA2Q96PC5 1412 aa7.06□□□□□ -1.28
VRK3-222ENST00000601324 SYCP2Q9BX26 1530 aa7.06□□□□□ -1.28
VRK3-222ENST00000601324 IQGAP1P46940 1657 aa7.06□□□□□ -1.28
VRK3-222ENST00000601324 NLRP1Q9C000 1473 aa7.05□□□□□ -1.28
VRK3-222ENST00000601324 SPAG9O60271 1321 aaKnown RBP7.05□□□□□ -1.28
VRK3-222ENST00000601324 CDC42BPAQ5VT25 1732 aa7.05□□□□□ -1.28
VRK3-222ENST00000601324 CLIP1P30622 1438 aa7.05□□□□□ -1.28
VRK3-222ENST00000601324 J3QW42 95 aa7.05□□□□□ -1.28
VRK3-222ENST00000601324 GHRHP01286 108 aa7.05□□□□□ -1.28
VRK3-222ENST00000601324 CELA2BP08218 269 aaPredicted RBP7.05□□□□□ -1.28
VRK3-222ENST00000601324 CPB1P15086 417 aa7.05□□□□□ -1.28
VRK3-222ENST00000601324 IRS1P35568 1242 aa7.05□□□□□ -1.28
VRK3-222ENST00000601324 TAGLNQ01995 201 aaKnown RBP7.05□□□□□ -1.28
VRK3-222ENST00000601324 PEAR1Q5VY43 1037 aaPredicted RBP7.05□□□□□ -1.28
VRK3-222ENST00000601324 GGT6Q6P531 493 aa7.05□□□□□ -1.28
VRK3-222ENST00000601324 LYPD4Q6UWN0 246 aa7.05□□□□□ -1.28
VRK3-222ENST00000601324 EPS8L3Q8TE67 593 aaKnown RBP7.05□□□□□ -1.28
VRK3-222ENST00000601324 EDARADDQ8WWZ3 215 aa7.05□□□□□ -1.28
VRK3-222ENST00000601324 LATS2Q9NRM7 1088 aa7.05□□□□□ -1.28
VRK3-222ENST00000601324 NLRP2Q9NX02 1062 aa7.05□□□□□ -1.28
VRK3-222ENST00000601324 FRRS1LQ9P0K9 344 aa7.05□□□□□ -1.28
VRK3-222ENST00000601324 GPATCH8Q9UKJ3 1502 aaKnown RBP7.05□□□□□ -1.28
VRK3-222ENST00000601324 WIPF1O43516 503 aa7.04□□□□□ -1.28
VRK3-222ENST00000601324 HNRNPMP52272 730 aaKnown RBP eCLIP7.04□□□□□ -1.28
VRK3-222ENST00000601324 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.04□□□□□ -1.28
VRK3-222ENST00000601324 KIAA0319Q5VV43 1072 aa7.04□□□□□ -1.28
VRK3-222ENST00000601324 THEMISQ8N1K5 641 aaPredicted RBP7.04□□□□□ -1.28
VRK3-222ENST00000601324 GALNT6Q8NCL4 622 aa7.04□□□□□ -1.28
VRK3-222ENST00000601324 FRMD6Q96NE9 622 aa7.04□□□□□ -1.28
VRK3-222ENST00000601324 DUSP9Q99956 384 aaKnown RBP7.04□□□□□ -1.28
VRK3-222ENST00000601324 PARP2Q9UGN5 583 aa7.04□□□□□ -1.28
VRK3-222ENST00000601324 FAM135AQ9P2D6 1515 aa7.04□□□□□ -1.28
VRK3-222ENST00000601324 UGGT1Q9NYU2 1555 aa7.03□□□□□ -1.28
VRK3-222ENST00000601324 A0A1W2PP55 124 aa7.03□□□□□ -1.28
VRK3-222ENST00000601324 GADD45BO75293 160 aaPredicted RBP7.03□□□□□ -1.28
VRK3-222ENST00000601324 ACPPP15309 386 aa7.03□□□□□ -1.28
VRK3-222ENST00000601324 GNA15P30679 374 aa7.03□□□□□ -1.28
VRK3-222ENST00000601324 PERM1Q5SV97 790 aa7.03□□□□□ -1.28
VRK3-222ENST00000601324 ZNF385CQ66K41 422 aaPredicted RBP7.03□□□□□ -1.28
VRK3-222ENST00000601324 PSAPL1Q6NUJ1 521 aa7.03□□□□□ -1.28
VRK3-222ENST00000601324 KANK3Q6NY19 840 aa7.03□□□□□ -1.28
VRK3-222ENST00000601324 ELMSAN1Q6PJG2 1045 aa7.03□□□□□ -1.28
VRK3-222ENST00000601324 PI16Q6UXB8 463 aa7.03□□□□□ -1.28
VRK3-222ENST00000601324 WHAMMQ8TF30 809 aa7.03□□□□□ -1.28
VRK3-222ENST00000601324 PLD4Q96BZ4 506 aa7.03□□□□□ -1.28
VRK3-222ENST00000601324 OSMRQ99650 979 aa7.03□□□□□ -1.28
VRK3-222ENST00000601324 LPIN3Q9BQK8 851 aa7.03□□□□□ -1.28
VRK3-222ENST00000601324 ZKSCAN3Q9BRR0 538 aa7.03□□□□□ -1.28
VRK3-222ENST00000601324 BCL11AQ9H165 835 aa7.03□□□□□ -1.28
VRK3-222ENST00000601324 SUV39H2Q9H5I1 410 aa7.03□□□□□ -1.28
VRK3-222ENST00000601324 DZANK1Q9NVP4 752 aa7.03□□□□□ -1.28
VRK3-222ENST00000601324 SPG7Q9UQ90 795 aa7.03□□□□□ -1.28
VRK3-222ENST00000601324 STARD13Q9Y3M8 1113 aa7.03□□□□□ -1.28
VRK3-222ENST00000601324 DHX29Q7Z478 1369 aaKnown RBP7.03□□□□□ -1.28
VRK3-222ENST00000601324 MBD5Q9P267 1494 aa7.03□□□□□ -1.28
VRK3-222ENST00000601324 MAP3K1Q13233 1512 aa7.02□□□□□ -1.29
VRK3-222ENST00000601324 LRP6O75581 1613 aa7.02□□□□□ -1.29
VRK3-222ENST00000601324 SHISA8B8ZZ34 492 aa7.02□□□□□ -1.29
VRK3-222ENST00000601324 GIPC1O14908 333 aa7.02□□□□□ -1.29
VRK3-222ENST00000601324 ATP11AP98196 1134 aa7.02□□□□□ -1.29
VRK3-222ENST00000601324 XPCQ01831 940 aaPredicted RBP7.02□□□□□ -1.29
VRK3-222ENST00000601324 MAP3K10Q02779 954 aa7.02□□□□□ -1.29
VRK3-222ENST00000601324 CHSY3Q70JA7 882 aa7.02□□□□□ -1.29
VRK3-222ENST00000601324 BTBD6Q96KE9 485 aa7.02□□□□□ -1.29
VRK3-222ENST00000601324 PBX4Q9BYU1 374 aa7.02□□□□□ -1.29
VRK3-222ENST00000601324 SMG9Q9H0W8 520 aaKnown RBP7.02□□□□□ -1.29
VRK3-222ENST00000601324 EHD4Q9H223 541 aa7.02□□□□□ -1.29
VRK3-222ENST00000601324 RASSF4Q9H2L5 321 aa7.02□□□□□ -1.29
VRK3-222ENST00000601324 ARHGAP23Q9P227 1491 aa7.02□□□□□ -1.29
VRK3-222ENST00000601324 EEA1Q15075 1411 aa7.01□□□□□ -1.29
VRK3-222ENST00000601324 KDM5DQ9BY66 1539 aa7.01□□□□□ -1.29
VRK3-222ENST00000601324 NCOA2Q15596 1464 aa7.01□□□□□ -1.29
VRK3-222ENST00000601324 CDK12Q9NYV4 1490 aaPredicted RBP7.01□□□□□ -1.29
VRK3-222ENST00000601324 NFKBIEO00221 500 aa7.01□□□□□ -1.29
VRK3-222ENST00000601324 SMNDC1O75940 238 aaKnown RBP eCLIP7.01□□□□□ -1.29
VRK3-222ENST00000601324 ITGAEP38570 1179 aa7.01□□□□□ -1.29
VRK3-222ENST00000601324 TMC4Q7Z404 712 aa7.01□□□□□ -1.29
VRK3-222ENST00000601324 MICALL1Q8N3F8 863 aa7.01□□□□□ -1.29
VRK3-222ENST00000601324 TMEM102Q8N9M5 508 aaPredicted RBP7.01□□□□□ -1.29
VRK3-222ENST00000601324 TTC9Q92623 222 aa7.01□□□□□ -1.29
VRK3-222ENST00000601324 RNF19AQ9NV58 838 aa7.01□□□□□ -1.29
VRK3-222ENST00000601324 TRAK1Q9UPV9 953 aa7.01□□□□□ -1.29
VRK3-222ENST00000601324 RTEL1-TNFRSF6BF6WH68 1400 aa7.01□□□□□ -1.29
VRK3-222ENST00000601324 TRPA1O75762 1119 aa7□□□□□ -1.29
VRK3-222ENST00000601324 RGS9O75916 674 aaPredicted RBP7□□□□□ -1.29
VRK3-222ENST00000601324 ALBP02768 609 aa7□□□□□ -1.29
VRK3-222ENST00000601324 LTKP29376 864 aa7□□□□□ -1.29
VRK3-222ENST00000601324 DAB2P98082 770 aa7□□□□□ -1.29
VRK3-222ENST00000601324 PSMD2Q13200 908 aa7□□□□□ -1.29
VRK3-222ENST00000601324 GRM2Q14416 872 aa7□□□□□ -1.29
VRK3-222ENST00000601324 PRPF40BQ6NWY9 871 aaKnown RBP7□□□□□ -1.29
VRK3-222ENST00000601324 C20orf204Q6ZNR8 217 aa7□□□□□ -1.29
VRK3-222ENST00000601324 CCNJLQ8IV13 435 aa7□□□□□ -1.29
VRK3-222ENST00000601324 SVOPQ8N4V2 548 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms