RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 PITPNM2Q9BZ72 1349 aa13.97□□□□□ -0.17
ZNF548-211ENST00000600927 REC8O95072 547 aa13.97□□□□□ -0.17
ZNF548-211ENST00000600927 TNNI3KQ59H18 835 aa13.97□□□□□ -0.17
ZNF548-211ENST00000600927 CST9Q5W186 159 aa13.97□□□□□ -0.17
ZNF548-211ENST00000600927 CDC37L1Q7L3B6 337 aa13.97□□□□□ -0.17
ZNF548-211ENST00000600927 AACSQ86V21 672 aa13.97□□□□□ -0.17
ZNF548-211ENST00000600927 C22orf23Q9BZE7 217 aa13.97□□□□□ -0.17
ZNF548-211ENST00000600927 GGA3Q9NZ52 723 aa13.97□□□□□ -0.17
ZNF548-211ENST00000600927 FPGT-TNNI3KV9GXZ4 949 aa13.97□□□□□ -0.17
ZNF548-211ENST00000600927 HIP1O00291 1037 aa13.96□□□□□ -0.17
ZNF548-211ENST00000600927 ATP5JP18859 108 aa13.96□□□□□ -0.17
ZNF548-211ENST00000600927 KIAA0825Q8IV33 1275 aa13.96□□□□□ -0.17
ZNF548-211ENST00000600927 MTMR14Q8NCE2 650 aa13.96□□□□□ -0.17
ZNF548-211ENST00000600927 FBXW7Q969H0 707 aa13.96□□□□□ -0.17
ZNF548-211ENST00000600927 EVI5LQ96CN4 794 aa13.96□□□□□ -0.17
ZNF548-211ENST00000600927 CEP126Q9P2H0 1117 aa13.96□□□□□ -0.17
ZNF548-211ENST00000600927 RASSF10A6NK89 507 aa13.95□□□□□ -0.18
ZNF548-211ENST00000600927 WNT10BO00744 389 aa13.95□□□□□ -0.18
ZNF548-211ENST00000600927 IFIT1P09914 478 aaKnown RBP13.95□□□□□ -0.18
ZNF548-211ENST00000600927 SLC5A1P13866 664 aa13.95□□□□□ -0.18
ZNF548-211ENST00000600927 BCAMP50895 628 aa13.95□□□□□ -0.18
ZNF548-211ENST00000600927 TFCP2Q12800 502 aa13.95□□□□□ -0.18
ZNF548-211ENST00000600927 SCARF1Q14162 830 aa13.95□□□□□ -0.18
ZNF548-211ENST00000600927 ATP2B3Q16720 1220 aa13.95□□□□□ -0.18
ZNF548-211ENST00000600927 CAVIN4Q5BKX8 364 aa13.95□□□□□ -0.18
ZNF548-211ENST00000600927 RBM26Q5T8P6 1007 aaKnown RBP13.95□□□□□ -0.18
ZNF548-211ENST00000600927 OGFOD1Q8N543 542 aa13.95□□□□□ -0.18
ZNF548-211ENST00000600927 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.95□□□□□ -0.18
ZNF548-211ENST00000600927 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.95□□□□□ -0.18
ZNF548-211ENST00000600927 ECM29Q5VYK3 1845 aa13.94□□□□□ -0.18
ZNF548-211ENST00000600927 TRIM6-TRIM34B2RNG4 842 aa13.94□□□□□ -0.18
ZNF548-211ENST00000600927 ADM5C9JUS6 153 aa13.94□□□□□ -0.18
ZNF548-211ENST00000600927 CHMLP26374 656 aa13.94□□□□□ -0.18
ZNF548-211ENST00000600927 MFAP1P55081 439 aaKnown RBP13.94□□□□□ -0.18
ZNF548-211ENST00000600927 NBPF9Q3BBW0 867 aa13.94□□□□□ -0.18
ZNF548-211ENST00000600927 MFSD14BQ5SR56 506 aa13.94□□□□□ -0.18
ZNF548-211ENST00000600927 ANGEL2Q5VTE6 544 aaKnown RBP13.94□□□□□ -0.18
ZNF548-211ENST00000600927 KRT26Q7Z3Y9 468 aa13.94□□□□□ -0.18
ZNF548-211ENST00000600927 JAG2Q9Y219 1238 aa13.94□□□□□ -0.18
ZNF548-211ENST00000600927 TLL2Q9Y6L7 1015 aa13.94□□□□□ -0.18
ZNF548-211ENST00000600927 DLK2Q6UY11 383 aa13.93□□□□□ -0.18
ZNF548-211ENST00000600927 USP48Q86UV5 1035 aa13.93□□□□□ -0.18
ZNF548-211ENST00000600927 RUFY2Q8WXA3 655 aa13.93□□□□□ -0.18
ZNF548-211ENST00000600927 DCPSQ96C86 337 aaKnown RBP13.93□□□□□ -0.18
ZNF548-211ENST00000600927 HDAC9Q9UKV0 1011 aa13.93□□□□□ -0.18
ZNF548-211ENST00000600927 CELF2O95319 508 aaKnown RBP13.92□□□□□ -0.18
ZNF548-211ENST00000600927 BECN1Q14457 450 aa13.92□□□□□ -0.18
ZNF548-211ENST00000600927 VPS37DQ86XT2 251 aa13.92□□□□□ -0.18
ZNF548-211ENST00000600927 TBC1D22AQ8WUA7 517 aa13.92□□□□□ -0.18
ZNF548-211ENST00000600927 RILPL2Q969X0 211 aa13.92□□□□□ -0.18
ZNF548-211ENST00000600927 USP26Q9BXU7 913 aa13.92□□□□□ -0.18
ZNF548-211ENST00000600927 CCDC8Q9H0W5 538 aaPredicted RBP13.92□□□□□ -0.18
ZNF548-211ENST00000600927 IQSEC3Q9UPP2 1182 aaPredicted RBP13.92□□□□□ -0.18
ZNF548-211ENST00000600927 PCDHAC2Q9Y5I4 1007 aa13.92□□□□□ -0.18
ZNF548-211ENST00000600927 RFX7Q2KHR2 1363 aa13.92□□□□□ -0.18
ZNF548-211ENST00000600927 MYH13Q9UKX3 1938 aa13.92□□□□□ -0.18
ZNF548-211ENST00000600927 PDS5AQ29RF7 1337 aaKnown RBP13.91□□□□□ -0.18
ZNF548-211ENST00000600927 SPDYE2BA6NHP3 402 aa13.91□□□□□ -0.18
ZNF548-211ENST00000600927 SPDYE6P0CI01 402 aa13.91□□□□□ -0.18
ZNF548-211ENST00000600927 GRIK5Q16478 980 aa13.91□□□□□ -0.18
ZNF548-211ENST00000600927 SAPCD2Q86UD0 394 aa13.91□□□□□ -0.18
ZNF548-211ENST00000600927 SULF1Q8IWU6 871 aa13.91□□□□□ -0.18
ZNF548-211ENST00000600927 HHIPL1Q96JK4 782 aa13.91□□□□□ -0.18
ZNF548-211ENST00000600927 ZNF512BQ96KM6 892 aaPredicted RBP13.91□□□□□ -0.18
ZNF548-211ENST00000600927 ESYT1Q9BSJ8 1104 aa13.91□□□□□ -0.18
ZNF548-211ENST00000600927 MKRN1Q9UHC7 482 aaKnown RBP13.91□□□□□ -0.18
ZNF548-211ENST00000600927 DBNLQ9UJU6 430 aaKnown RBP13.91□□□□□ -0.18
ZNF548-211ENST00000600927 SERPINA10Q9UK55 444 aa13.91□□□□□ -0.18
ZNF548-211ENST00000600927 SUGT1Q9Y2Z0 365 aa13.91□□□□□ -0.18
ZNF548-211ENST00000600927 POLR2AP24928 1970 aaKnown RBP13.91□□□□□ -0.18
ZNF548-211ENST00000600927 SALL1Q9NSC2 1324 aa13.9□□□□□ -0.18
ZNF548-211ENST00000600927 A0A1B0GUL7 405 aa13.9□□□□□ -0.18
ZNF548-211ENST00000600927 SEMA3EO15041 775 aa13.9□□□□□ -0.18
ZNF548-211ENST00000600927 ADORA1P30542 326 aa13.9□□□□□ -0.18
ZNF548-211ENST00000600927 PHKA1P46020 1223 aa13.9□□□□□ -0.18
ZNF548-211ENST00000600927 CFAP100Q494V2 611 aa13.9□□□□□ -0.18
ZNF548-211ENST00000600927 IL17RAQ96F46 866 aa13.9□□□□□ -0.18
ZNF548-211ENST00000600927 CDCA5Q96FF9 252 aa13.9□□□□□ -0.18
ZNF548-211ENST00000600927 PAPPA2Q9BXP8 1791 aa13.9□□□□□ -0.18
ZNF548-211ENST00000600927 F8W031 263 aaPredicted RBP13.89□□□□□ -0.19
ZNF548-211ENST00000600927 VEGFBP49765 207 aa13.89□□□□□ -0.19
ZNF548-211ENST00000600927 HDLBPQ00341 1268 aaKnown RBP13.89□□□□□ -0.19
ZNF548-211ENST00000600927 CHAF1AQ13111 956 aaPredicted RBP13.89□□□□□ -0.19
ZNF548-211ENST00000600927 DLGAP5Q15398 846 aa13.89□□□□□ -0.19
ZNF548-211ENST00000600927 DEFB115Q30KQ5 88 aa13.89□□□□□ -0.19
ZNF548-211ENST00000600927 CCDC158Q5M9N0 1113 aa13.89□□□□□ -0.19
ZNF548-211ENST00000600927 CCDC102BQ68D86 513 aa13.89□□□□□ -0.19
ZNF548-211ENST00000600927 SNX21Q969T3 373 aa13.89□□□□□ -0.19
ZNF548-211ENST00000600927 XAGE2Q96GT9 111 aa13.89□□□□□ -0.19
ZNF548-211ENST00000600927 PRMT6Q96LA8 375 aaPredicted RBP13.89□□□□□ -0.19
ZNF548-211ENST00000600927 HAUS7Q99871 368 aa13.89□□□□□ -0.19
ZNF548-211ENST00000600927 MRIQ9BWK5 157 aa13.89□□□□□ -0.19
ZNF548-211ENST00000600927 BCL11AQ9H165 835 aa13.89□□□□□ -0.19
ZNF548-211ENST00000600927 SNRKQ9NRH2 765 aa13.89□□□□□ -0.19
ZNF548-211ENST00000600927 DAXXQ9UER7 740 aaPredicted RBP13.89□□□□□ -0.19
ZNF548-211ENST00000600927 ABT1Q9ULW3 272 aaKnown RBP13.89□□□□□ -0.19
ZNF548-211ENST00000600927 TTF2Q9UNY4 1162 aaKnown RBP13.89□□□□□ -0.19
ZNF548-211ENST00000600927 RAD50Q92878 1312 aa13.89□□□□□ -0.19
ZNF548-211ENST00000600927 SSC5DA1L4H1 1573 aa13.88□□□□□ -0.19
ZNF548-211ENST00000600927 SGSM2O43147 1006 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms