RNA–Protein interactions for RNA: ENST00000599808.1

HOMER3-211, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-211ENST00000599808 SERPINA10Q9UK55 444 aa15.68■□□□□ 0.1
HOMER3-211ENST00000599808 TTF2Q9UNY4 1162 aaKnown RBP15.68■□□□□ 0.1
HOMER3-211ENST00000599808 COLQQ9Y215 455 aaPredicted RBP15.68■□□□□ 0.1
HOMER3-211ENST00000599808 GTF2A2P52657 109 aa15.67■□□□□ 0.1
HOMER3-211ENST00000599808 ARHGEF6Q15052 776 aa15.67■□□□□ 0.1
HOMER3-211ENST00000599808 LDHAL6AQ6ZMR3 332 aa15.67■□□□□ 0.1
HOMER3-211ENST00000599808 NBPF11Q86T75 865 aa15.67■□□□□ 0.1
HOMER3-211ENST00000599808 DZIP1LQ8IYY4 767 aaKnown RBP15.67■□□□□ 0.1
HOMER3-211ENST00000599808 TMEM39BQ9GZU3 492 aa15.67■□□□□ 0.1
HOMER3-211ENST00000599808 TCP10L2B9ZVM9 353 aa15.66■□□□□ 0.1
HOMER3-211ENST00000599808 F6X3S4 739 aa15.66■□□□□ 0.1
HOMER3-211ENST00000599808 MYCP01106 439 aaPredicted RBP15.66■□□□□ 0.1
HOMER3-211ENST00000599808 GYG1P46976 350 aa15.66■□□□□ 0.1
HOMER3-211ENST00000599808 MAP3K9P80192 1104 aa15.66■□□□□ 0.1
HOMER3-211ENST00000599808 CCDC57Q2TAC2 916 aa15.66■□□□□ 0.1
HOMER3-211ENST00000599808 SLC4A8Q2Y0W8 1093 aa15.66■□□□□ 0.1
HOMER3-211ENST00000599808 BEND3Q5T5X7 828 aa15.66■□□□□ 0.1
HOMER3-211ENST00000599808 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.66■□□□□ 0.1
HOMER3-211ENST00000599808 OTUD5Q96G74 571 aa15.66■□□□□ 0.1
HOMER3-211ENST00000599808 CNNM1Q9NRU3 951 aa15.66■□□□□ 0.1
HOMER3-211ENST00000599808 CRKP46108 304 aa15.65■□□□□ 0.1
HOMER3-211ENST00000599808 TAF7LQ5H9L4 462 aa15.65■□□□□ 0.1
HOMER3-211ENST00000599808 FAM84BQ96KN1 310 aaPredicted RBP15.65■□□□□ 0.1
HOMER3-211ENST00000599808 ARHGAP39Q9C0H5 1083 aa15.65■□□□□ 0.1
HOMER3-211ENST00000599808 IL16Q14005 1332 aa15.65■□□□□ 0.1
HOMER3-211ENST00000599808 VAMP4O75379 141 aa15.64■□□□□ 0.09
HOMER3-211ENST00000599808 HIBADHP31937 336 aaKnown RBP15.64■□□□□ 0.09
HOMER3-211ENST00000599808 UBE4AQ14139 1066 aa15.64■□□□□ 0.09
HOMER3-211ENST00000599808 GRIK5Q16478 980 aa15.64■□□□□ 0.09
HOMER3-211ENST00000599808 SH3TC2Q8TF17 1288 aa15.64■□□□□ 0.09
HOMER3-211ENST00000599808 CSADQ9Y600 493 aa15.64■□□□□ 0.09
HOMER3-211ENST00000599808 FANCIQ9NVI1 1328 aa15.64■□□□□ 0.09
HOMER3-211ENST00000599808 RANBP2P49792 3224 aaKnown RBP15.64■□□□□ 0.09
HOMER3-211ENST00000599808 SPDYE5A6NIY4 337 aa15.63■□□□□ 0.09
HOMER3-211ENST00000599808 H0YGN5 161 aa15.63■□□□□ 0.09
HOMER3-211ENST00000599808 TLR2O60603 784 aa15.63■□□□□ 0.09
HOMER3-211ENST00000599808 TNNI2P48788 182 aa15.63■□□□□ 0.09
HOMER3-211ENST00000599808 CCDC184Q52MB2 194 aa15.63■□□□□ 0.09
HOMER3-211ENST00000599808 SNCAIPQ9Y6H5 919 aa15.63■□□□□ 0.09
HOMER3-211ENST00000599808 GRM8O00222 908 aa15.62■□□□□ 0.09
HOMER3-211ENST00000599808 LACTBP83111 547 aaPredicted RBP15.62■□□□□ 0.09
HOMER3-211ENST00000599808 PUS3Q9BZE2 481 aaKnown RBP15.62■□□□□ 0.09
HOMER3-211ENST00000599808 BTBD19C9JJ37 291 aa15.61■□□□□ 0.09
HOMER3-211ENST00000599808 CETPP11597 493 aa15.61■□□□□ 0.09
HOMER3-211ENST00000599808 CACNB3P54284 484 aa15.61■□□□□ 0.09
HOMER3-211ENST00000599808 ERO1BQ86YB8 467 aa15.61■□□□□ 0.09
HOMER3-211ENST00000599808 ZKSCAN4Q969J2 545 aaPredicted RBP15.61■□□□□ 0.09
HOMER3-211ENST00000599808 ZCCHC17Q9NP64 241 aaKnown RBP15.61■□□□□ 0.09
HOMER3-211ENST00000599808 IQSEC3Q9UPP2 1182 aaPredicted RBP15.61■□□□□ 0.09
HOMER3-211ENST00000599808 IRF6O14896 467 aa15.6■□□□□ 0.09
HOMER3-211ENST00000599808 WDHD1O75717 1129 aaPredicted RBP15.6■□□□□ 0.09
HOMER3-211ENST00000599808 EXOSC9Q06265 439 aaKnown RBP15.6■□□□□ 0.09
HOMER3-211ENST00000599808 KIF22Q14807 665 aa15.6■□□□□ 0.09
HOMER3-211ENST00000599808 WRNIP1Q96S55 665 aa15.6■□□□□ 0.09
HOMER3-211ENST00000599808 C9orf78Q9NZ63 289 aaPredicted RBP15.6■□□□□ 0.09
HOMER3-211ENST00000599808 AK9Q5TCS8 1911 aa15.6■□□□□ 0.09
HOMER3-211ENST00000599808 ECM2O94769 699 aaPredicted RBP15.59■□□□□ 0.09
HOMER3-211ENST00000599808 GNRH1P01148 92 aa15.59■□□□□ 0.09
HOMER3-211ENST00000599808 CTGFP29279 349 aa15.59■□□□□ 0.09
HOMER3-211ENST00000599808 HDLBPQ00341 1268 aaKnown RBP15.59■□□□□ 0.09
HOMER3-211ENST00000599808 CHAF1AQ13111 956 aaPredicted RBP15.59■□□□□ 0.09
HOMER3-211ENST00000599808 SNAPC2Q13487 334 aa15.59■□□□□ 0.09
HOMER3-211ENST00000599808 FBXO33Q7Z6M2 555 aa15.59■□□□□ 0.09
HOMER3-211ENST00000599808 SHISA4Q96DD7 197 aa15.59■□□□□ 0.09
HOMER3-211ENST00000599808 RIPOR2Q9Y4F9 1068 aa15.59■□□□□ 0.09
HOMER3-211ENST00000599808 MYH13Q9UKX3 1938 aa15.58■□□□□ 0.09
HOMER3-211ENST00000599808 PRMT2P55345 433 aa15.58■□□□□ 0.08
HOMER3-211ENST00000599808 PPIL2Q13356 520 aa15.58■□□□□ 0.08
HOMER3-211ENST00000599808 MTFR1Q15390 333 aa15.58■□□□□ 0.08
HOMER3-211ENST00000599808 NCBP3Q53F19 620 aaKnown RBP15.58■□□□□ 0.08
HOMER3-211ENST00000599808 TEKT1Q969V4 418 aa15.58■□□□□ 0.08
HOMER3-211ENST00000599808 KAZALD1Q96I82 304 aa15.58■□□□□ 0.08
HOMER3-211ENST00000599808 SUCLG2Q96I99 432 aa15.58■□□□□ 0.08
HOMER3-211ENST00000599808 MGAMO43451 1857 aa15.57■□□□□ 0.08
HOMER3-211ENST00000599808 ALDH1L1O75891 902 aa15.57■□□□□ 0.08
HOMER3-211ENST00000599808 C17orf99Q6UX52 265 aa15.57■□□□□ 0.08
HOMER3-211ENST00000599808 CHRDL2Q6WN34 429 aa15.57■□□□□ 0.08
HOMER3-211ENST00000599808 FAM83AQ86UY5 434 aa15.57■□□□□ 0.08
HOMER3-211ENST00000599808 VPS37DQ86XT2 251 aa15.57■□□□□ 0.08
HOMER3-211ENST00000599808 TBC1D22AQ8WUA7 517 aa15.57■□□□□ 0.08
HOMER3-211ENST00000599808 ZDHHC15Q96MV8 337 aa15.57■□□□□ 0.08
HOMER3-211ENST00000599808 MROH5Q6ZUA9 1318 aa15.57■□□□□ 0.08
HOMER3-211ENST00000599808 FKBP1CQ5VVH2 108 aa15.56■□□□□ 0.08
HOMER3-211ENST00000599808 APOBEC3HQ6NTF7 200 aaKnown RBP15.56■□□□□ 0.08
HOMER3-211ENST00000599808 TRIM47Q96LD4 638 aa15.56■□□□□ 0.08
HOMER3-211ENST00000599808 MRIQ9BWK5 157 aa15.56■□□□□ 0.08
HOMER3-211ENST00000599808 TMOD2Q9NZR1 351 aa15.56■□□□□ 0.08
HOMER3-211ENST00000599808 SRRDQ9UH36 339 aa15.56■□□□□ 0.08
HOMER3-211ENST00000599808 CPA4Q9UI42 421 aa15.56■□□□□ 0.08
HOMER3-211ENST00000599808 RPAP1Q9BWH6 1393 aaPredicted RBP15.55■□□□□ 0.08
HOMER3-211ENST00000599808 ADGRA2Q96PE1 1338 aa15.55■□□□□ 0.08
HOMER3-211ENST00000599808 FRAT2O75474 233 aaPredicted RBP15.55■□□□□ 0.08
HOMER3-211ENST00000599808 NBPF7P0C2Y1 421 aaPredicted RBP15.55■□□□□ 0.08
HOMER3-211ENST00000599808 PSMC4P43686 418 aa15.55■□□□□ 0.08
HOMER3-211ENST00000599808 PPATQ06203 517 aa15.55■□□□□ 0.08
HOMER3-211ENST00000599808 LRRC24Q50LG9 513 aa15.55■□□□□ 0.08
HOMER3-211ENST00000599808 SLC4A10Q6U841 1118 aa15.55■□□□□ 0.08
HOMER3-211ENST00000599808 WDR63Q8IWG1 891 aa15.55■□□□□ 0.08
HOMER3-211ENST00000599808 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.55■□□□□ 0.08
HOMER3-211ENST00000599808 DPF3Q92784 378 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms