RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 USP25Q9UHP3 1055 aa16.93■□□□□ 0.3
SYMPK-213ENST00000599460 LMOD1P29536 600 aaPredicted RBP16.92■□□□□ 0.3
SYMPK-213ENST00000599460 MRPS27Q92552 414 aaKnown RBP16.92■□□□□ 0.3
SYMPK-213ENST00000599460 PTCH1Q13635 1447 aa16.92■□□□□ 0.3
SYMPK-213ENST00000599460 CHRNDQ07001 517 aa16.92■□□□□ 0.3
SYMPK-213ENST00000599460 DIP2BQ9P265 1576 aa16.92■□□□□ 0.3
SYMPK-213ENST00000599460 BCAMP50895 628 aa16.92■□□□□ 0.3
SYMPK-213ENST00000599460 RAB3GAP1Q15042 981 aa16.92■□□□□ 0.3
SYMPK-213ENST00000599460 TRIM75PA6NK02 468 aa16.92■□□□□ 0.3
SYMPK-213ENST00000599460 SFPQP23246 707 aaKnown RBP eCLIP16.92■□□□□ 0.3
SYMPK-213ENST00000599460 COPRSQ9NQ92 184 aa16.92■□□□□ 0.3
SYMPK-213ENST00000599460 PUS3Q9BZE2 481 aaKnown RBP16.91■□□□□ 0.3
SYMPK-213ENST00000599460 CLIP2Q9UDT6 1046 aa16.91■□□□□ 0.3
SYMPK-213ENST00000599460 PTPRMP28827 1452 aa16.91■□□□□ 0.3
SYMPK-213ENST00000599460 TOP1P11387 765 aaKnown RBP16.91■□□□□ 0.3
SYMPK-213ENST00000599460 SEPT12Q8IYM1 358 aa16.91■□□□□ 0.3
SYMPK-213ENST00000599460 AFMP43652 599 aa16.91■□□□□ 0.3
SYMPK-213ENST00000599460 CERS3Q8IU89 383 aa16.91■□□□□ 0.3
SYMPK-213ENST00000599460 ERMNQ8TAM6 284 aa16.91■□□□□ 0.3
SYMPK-213ENST00000599460 SPTLC2O15270 562 aa16.91■□□□□ 0.3
SYMPK-213ENST00000599460 LIG1P18858 919 aa16.91■□□□□ 0.3
SYMPK-213ENST00000599460 ZNF165P49910 485 aa16.91■□□□□ 0.3
SYMPK-213ENST00000599460 NCAPD2Q15021 1401 aa16.91■□□□□ 0.3
SYMPK-213ENST00000599460 STAT6P42226 847 aa16.91■□□□□ 0.3
SYMPK-213ENST00000599460 ANGEL1Q9UNK9 670 aaKnown RBP16.91■□□□□ 0.3
SYMPK-213ENST00000599460 USP31Q70CQ4 1352 aa16.9■□□□□ 0.3
SYMPK-213ENST00000599460 LRRC27Q9C0I9 530 aa16.9■□□□□ 0.3
SYMPK-213ENST00000599460 EIF6P56537 245 aaKnown RBP16.9■□□□□ 0.3
SYMPK-213ENST00000599460 TBC1D22AQ8WUA7 517 aa16.9■□□□□ 0.3
SYMPK-213ENST00000599460 MPHOSPH6Q99547 160 aaKnown RBP16.9■□□□□ 0.3
SYMPK-213ENST00000599460 MYCNP04198 464 aaPredicted RBP16.9■□□□□ 0.3
SYMPK-213ENST00000599460 NLGN1Q8N2Q7 840 aa16.9■□□□□ 0.3
SYMPK-213ENST00000599460 SYT1P21579 422 aa16.9■□□□□ 0.3
SYMPK-213ENST00000599460 GTF2IP78347 998 aa16.9■□□□□ 0.3
SYMPK-213ENST00000599460 KIAA1328Q86T90 577 aa16.9■□□□□ 0.3
SYMPK-213ENST00000599460 MAPKAPK5Q8IW41 473 aa16.9■□□□□ 0.3
SYMPK-213ENST00000599460 PKNOX2Q96KN3 472 aa16.9■□□□□ 0.3
SYMPK-213ENST00000599460 HAUS7Q99871 368 aa16.9■□□□□ 0.3
SYMPK-213ENST00000599460 DSCC1Q9BVC3 393 aa16.9■□□□□ 0.3
SYMPK-213ENST00000599460 C1orf167Q5SNV9 1468 aa16.89■□□□□ 0.3
SYMPK-213ENST00000599460 HSPA4P34932 840 aa16.89■□□□□ 0.29
SYMPK-213ENST00000599460 C2CD5Q86YS7 1000 aa16.89■□□□□ 0.29
SYMPK-213ENST00000599460 TGFBRAP1Q8WUH2 860 aa16.89■□□□□ 0.29
SYMPK-213ENST00000599460 ACBD3Q9H3P7 528 aa16.89■□□□□ 0.29
SYMPK-213ENST00000599460 DLC1Q96QB1 1528 aa16.89■□□□□ 0.29
SYMPK-213ENST00000599460 SPDYE3A6NKU9 549 aa16.89■□□□□ 0.29
SYMPK-213ENST00000599460 CACNA2D4Q7Z3S7 1137 aa16.89■□□□□ 0.29
SYMPK-213ENST00000599460 DACT1Q9NYF0 836 aa16.89■□□□□ 0.29
SYMPK-213ENST00000599460 GNA11P29992 359 aa16.89■□□□□ 0.29
SYMPK-213ENST00000599460 PLS1Q14651 629 aa16.89■□□□□ 0.29
SYMPK-213ENST00000599460 FBXO3Q9UK99 471 aa16.89■□□□□ 0.29
SYMPK-213ENST00000599460 CPSF1Q10570 1443 aaKnown RBP16.89■□□□□ 0.29
SYMPK-213ENST00000599460 BRAPQ7Z569 592 aa16.89■□□□□ 0.29
SYMPK-213ENST00000599460 NCOA5Q9HCD5 579 aaKnown RBP16.89■□□□□ 0.29
SYMPK-213ENST00000599460 MED14O60244 1454 aa16.89■□□□□ 0.29
SYMPK-213ENST00000599460 A0A0D9SFI3 127 aa16.88■□□□□ 0.29
SYMPK-213ENST00000599460 PATL2C9JE40 543 aaKnown RBP16.88■□□□□ 0.29
SYMPK-213ENST00000599460 PPIP5K2O43314 1243 aa16.88■□□□□ 0.29
SYMPK-213ENST00000599460 MTIF2P46199 727 aaKnown RBP16.88■□□□□ 0.29
SYMPK-213ENST00000599460 CCDC181Q5TID7 509 aa16.88■□□□□ 0.29
SYMPK-213ENST00000599460 GPCPD1Q9NPB8 672 aa16.88■□□□□ 0.29
SYMPK-213ENST00000599460 PALLDQ8WX93 1383 aa16.88■□□□□ 0.29
SYMPK-213ENST00000599460 MFSD14BQ5SR56 506 aa16.88■□□□□ 0.29
SYMPK-213ENST00000599460 EXOC1Q9NV70 894 aa16.88■□□□□ 0.29
SYMPK-213ENST00000599460 CIAO1O76071 339 aa16.88■□□□□ 0.29
SYMPK-213ENST00000599460 ATP2B4P23634 1241 aa16.88■□□□□ 0.29
SYMPK-213ENST00000599460 PDE8BO95263 885 aa16.88■□□□□ 0.29
SYMPK-213ENST00000599460 MCM7P33993 719 aa16.88■□□□□ 0.29
SYMPK-213ENST00000599460 ERFEQ4G0M1 354 aa16.88■□□□□ 0.29
SYMPK-213ENST00000599460 NLRP10Q86W26 655 aa16.87■□□□□ 0.29
SYMPK-213ENST00000599460 CPLX3Q8WVH0 158 aa16.87■□□□□ 0.29
SYMPK-213ENST00000599460 ARHGAP29Q52LW3 1261 aa16.87■□□□□ 0.29
SYMPK-213ENST00000599460 CCDC112Q8NEF3 446 aa16.87■□□□□ 0.29
SYMPK-213ENST00000599460 RMND1Q9NWS8 449 aa16.87■□□□□ 0.29
SYMPK-213ENST00000599460 ERVV-1B6SEH8 477 aa16.87■□□□□ 0.29
SYMPK-213ENST00000599460 TCP10Q12799 353 aa16.87■□□□□ 0.29
SYMPK-213ENST00000599460 NIM1KQ8IY84 436 aa16.87■□□□□ 0.29
SYMPK-213ENST00000599460 SEC62Q99442 399 aaKnown RBP16.87■□□□□ 0.29
SYMPK-213ENST00000599460 TBCAO75347 108 aaKnown RBP16.87■□□□□ 0.29
SYMPK-213ENST00000599460 RDXP35241 583 aaKnown RBP16.87■□□□□ 0.29
SYMPK-213ENST00000599460 LRSAM1Q6UWE0 723 aa16.87■□□□□ 0.29
SYMPK-213ENST00000599460 NUP88Q99567 741 aaPredicted RBP16.87■□□□□ 0.29
SYMPK-213ENST00000599460 ESPNB1AK53 854 aa16.87■□□□□ 0.29
SYMPK-213ENST00000599460 E7EWF7 191 aa16.87■□□□□ 0.29
SYMPK-213ENST00000599460 CCDC40Q4G0X9 1142 aa16.87■□□□□ 0.29
SYMPK-213ENST00000599460 MYO6Q9UM54 1294 aa16.87■□□□□ 0.29
SYMPK-213ENST00000599460 ADORA1P30542 326 aa16.86■□□□□ 0.29
SYMPK-213ENST00000599460 STXBP4Q6ZWJ1 553 aa16.86■□□□□ 0.29
SYMPK-213ENST00000599460 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.86■□□□□ 0.291e-6■■■■■ 166.9
SYMPK-213ENST00000599460 RRAGBQ5VZM2 374 aa16.86■□□□□ 0.29
SYMPK-213ENST00000599460 SH2D4AQ9H788 454 aa16.86■□□□□ 0.29
SYMPK-213ENST00000599460 TLR7Q9NYK1 1049 aaKnown RBP16.86■□□□□ 0.29
SYMPK-213ENST00000599460 ADAMTS13Q76LX8 1427 aa16.86■□□□□ 0.29
SYMPK-213ENST00000599460 DHX58Q96C10 678 aa16.86■□□□□ 0.29
SYMPK-213ENST00000599460 SEC31BQ9NQW1 1179 aa16.86■□□□□ 0.29
SYMPK-213ENST00000599460 SETD1BQ9UPS6 1966 aaKnown RBP16.86■□□□□ 0.29
SYMPK-213ENST00000599460 DEXIO95424 95 aa16.86■□□□□ 0.29
SYMPK-213ENST00000599460 HSP90B2PQ58FF3 399 aa16.86■□□□□ 0.29
SYMPK-213ENST00000599460 SYCP3Q8IZU3 236 aa16.86■□□□□ 0.29
SYMPK-213ENST00000599460 MYL10Q9BUA6 226 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms