RNA–Protein interactions for RNA: ENST00000599421.1

LINC00649-210, long intergenic non-protein coding RNA 649, humanhuman

TSL 2

Gene LINC00649, Length 728 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-210ENST00000599421 SLC4A2P04920 1241 aa12.02□□□□□ -0.49
LINC00649-210ENST00000599421 FLIIQ13045 1269 aa12.02□□□□□ -0.49
LINC00649-210ENST00000599421 GCKRQ14397 625 aa12.02□□□□□ -0.49
LINC00649-210ENST00000599421 TAF1CQ15572 869 aaPredicted RBP12.02□□□□□ -0.49
LINC00649-210ENST00000599421 BRI3BPQ8WY22 251 aa12.02□□□□□ -0.49
LINC00649-210ENST00000599421 ZFYVE28Q9HCC9 887 aa12.02□□□□□ -0.49
LINC00649-210ENST00000599421 CCL15-CCL14A0A0B4J2E2 113 aa12.01□□□□□ -0.49
LINC00649-210ENST00000599421 CSF1RP07333 972 aa12.01□□□□□ -0.49
LINC00649-210ENST00000599421 CT47B1P0C2W7 299 aaPredicted RBP12.01□□□□□ -0.49
LINC00649-210ENST00000599421 IL1R1P14778 569 aa12.01□□□□□ -0.49
LINC00649-210ENST00000599421 TNFAIP1Q13829 316 aa12.01□□□□□ -0.49
LINC00649-210ENST00000599421 CCL15Q16663 113 aa12.01□□□□□ -0.49
LINC00649-210ENST00000599421 GTF2A2P52657 109 aa12□□□□□ -0.49
LINC00649-210ENST00000599421 FKBP5Q13451 457 aaPredicted RBP12□□□□□ -0.49
LINC00649-210ENST00000599421 SPDYE2Q495Y8 402 aa12□□□□□ -0.49
LINC00649-210ENST00000599421 CHRDL2Q6WN34 429 aa12□□□□□ -0.49
LINC00649-210ENST00000599421 PPP1R3FQ6ZSY5 799 aaPredicted RBP12□□□□□ -0.49
LINC00649-210ENST00000599421 ZNF804AQ7Z570 1209 aa12□□□□□ -0.49
LINC00649-210ENST00000599421 SH3TC2Q8TF17 1288 aa12□□□□□ -0.49
LINC00649-210ENST00000599421 CNKSR2Q8WXI2 1034 aa12□□□□□ -0.49
LINC00649-210ENST00000599421 F6X3S4 739 aa11.99□□□□□ -0.49
LINC00649-210ENST00000599421 TAF5LO75529 589 aa11.99□□□□□ -0.49
LINC00649-210ENST00000599421 MYCP01106 439 aaPredicted RBP11.99□□□□□ -0.49
LINC00649-210ENST00000599421 RBM5P52756 815 aaKnown RBP eCLIP11.99□□□□□ -0.49
LINC00649-210ENST00000599421 VGLL4Q14135 290 aa11.99□□□□□ -0.49
LINC00649-210ENST00000599421 FAM43AQ8N2R8 423 aa11.99□□□□□ -0.49
LINC00649-210ENST00000599421 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.99□□□□□ -0.49
LINC00649-210ENST00000599421 DNAAF4Q8WXU2 420 aa11.99□□□□□ -0.49
LINC00649-210ENST00000599421 TEPSINQ96N21 525 aa11.99□□□□□ -0.49
LINC00649-210ENST00000599421 MYH13Q9UKX3 1938 aa11.99□□□□□ -0.49
LINC00649-210ENST00000599421 ANKRD18BA2A2Z9 1011 aa11.98□□□□□ -0.49
LINC00649-210ENST00000599421 TLR2O60603 784 aa11.98□□□□□ -0.49
LINC00649-210ENST00000599421 VAMP4O75379 141 aa11.98□□□□□ -0.49
LINC00649-210ENST00000599421 WDHD1O75717 1129 aaPredicted RBP11.98□□□□□ -0.49
LINC00649-210ENST00000599421 GNRH1P01148 92 aa11.98□□□□□ -0.49
LINC00649-210ENST00000599421 MAP3K9P80192 1104 aa11.98□□□□□ -0.49
LINC00649-210ENST00000599421 LACTBP83111 547 aaPredicted RBP11.98□□□□□ -0.49
LINC00649-210ENST00000599421 FOXO4P98177 505 aa11.98□□□□□ -0.49
LINC00649-210ENST00000599421 EXOSC9Q06265 439 aaKnown RBP11.98□□□□□ -0.49
LINC00649-210ENST00000599421 EPHA10Q5JZY3 1008 aa11.98□□□□□ -0.49
LINC00649-210ENST00000599421 CDAN1Q8IWY9 1227 aa11.98□□□□□ -0.49
LINC00649-210ENST00000599421 HELBQ8NG08 1087 aaPredicted RBP11.98□□□□□ -0.49
LINC00649-210ENST00000599421 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.98□□□□□ -0.49
LINC00649-210ENST00000599421 ZCCHC17Q9NP64 241 aaKnown RBP11.98□□□□□ -0.49
LINC00649-210ENST00000599421 RBM27Q9P2N5 1060 aaKnown RBP11.98□□□□□ -0.49
LINC00649-210ENST00000599421 ZNF70Q9UC06 446 aaPredicted RBP11.98□□□□□ -0.49
LINC00649-210ENST00000599421 JAG2Q9Y219 1238 aa11.98□□□□□ -0.49
LINC00649-210ENST00000599421 CSADQ9Y600 493 aa11.98□□□□□ -0.49
LINC00649-210ENST00000599421 FAM205AQ6ZU69 1335 aa11.97□□□□□ -0.49
LINC00649-210ENST00000599421 PRMT2P55345 433 aa11.97□□□□□ -0.49
LINC00649-210ENST00000599421 KIF22Q14807 665 aa11.97□□□□□ -0.49
LINC00649-210ENST00000599421 LINS1Q8NG48 757 aa11.97□□□□□ -0.49
LINC00649-210ENST00000599421 SHISA4Q96DD7 197 aa11.97□□□□□ -0.49
LINC00649-210ENST00000599421 ARHGAP39Q9C0H5 1083 aa11.97□□□□□ -0.49
LINC00649-210ENST00000599421 TDRD3Q9H7E2 651 aaKnown RBP11.97□□□□□ -0.49
LINC00649-210ENST00000599421 SERPINA10Q9UK55 444 aa11.97□□□□□ -0.49
LINC00649-210ENST00000599421 SPDYE5A6NIY4 337 aa11.96□□□□□ -0.49
LINC00649-210ENST00000599421 RRP1P56182 461 aaKnown RBP11.96□□□□□ -0.49
LINC00649-210ENST00000599421 IFIT5Q13325 482 aaKnown RBP11.96□□□□□ -0.49
LINC00649-210ENST00000599421 MFSD14BQ5SR56 506 aa11.96□□□□□ -0.49
LINC00649-210ENST00000599421 ERICH6BQ5W0A0 696 aa11.96□□□□□ -0.49
LINC00649-210ENST00000599421 DPF3Q92784 378 aa11.96□□□□□ -0.49
LINC00649-210ENST00000599421 ZNF594Q96JF6 807 aaPredicted RBP11.96□□□□□ -0.49
LINC00649-210ENST00000599421 TMEM39BQ9GZU3 492 aa11.96□□□□□ -0.49
LINC00649-210ENST00000599421 TTF2Q9UNY4 1162 aaKnown RBP11.96□□□□□ -0.49
LINC00649-210ENST00000599421 MGAMO43451 1857 aa11.95□□□□□ -0.5
LINC00649-210ENST00000599421 TCP10L2B9ZVM9 353 aa11.95□□□□□ -0.5
LINC00649-210ENST00000599421 BTBD19C9JJ37 291 aa11.95□□□□□ -0.5
LINC00649-210ENST00000599421 DLL1O00548 723 aa11.95□□□□□ -0.5
LINC00649-210ENST00000599421 CETPP11597 493 aa11.95□□□□□ -0.5
LINC00649-210ENST00000599421 TNNI2P48788 182 aa11.95□□□□□ -0.5
LINC00649-210ENST00000599421 MTFR1Q15390 333 aa11.95□□□□□ -0.5
LINC00649-210ENST00000599421 BEND3Q5T5X7 828 aa11.95□□□□□ -0.5
LINC00649-210ENST00000599421 DZIP1LQ8IYY4 767 aaKnown RBP11.95□□□□□ -0.5
LINC00649-210ENST00000599421 NKX2-3Q8TAU0 364 aa11.95□□□□□ -0.5
LINC00649-210ENST00000599421 PRO3102Q9H379 93 aa11.95□□□□□ -0.5
LINC00649-210ENST00000599421 AK9Q5TCS8 1911 aa11.94□□□□□ -0.5
LINC00649-210ENST00000599421 SNAPC2Q13487 334 aa11.94□□□□□ -0.5
LINC00649-210ENST00000599421 UBE2Q1Q7Z7E8 422 aa11.94□□□□□ -0.5
LINC00649-210ENST00000599421 ERO1BQ86YB8 467 aa11.94□□□□□ -0.5
LINC00649-210ENST00000599421 SLC17A8Q8NDX2 589 aa11.94□□□□□ -0.5
LINC00649-210ENST00000599421 TDRD7Q8NHU6 1098 aaKnown RBP11.94□□□□□ -0.5
LINC00649-210ENST00000599421 HTATIP2Q9BUP3 242 aa11.94□□□□□ -0.5
LINC00649-210ENST00000599421 CHMP3Q9Y3E7 222 aa11.94□□□□□ -0.5
LINC00649-210ENST00000599421 SNCAIPQ9Y6H5 919 aa11.94□□□□□ -0.5
LINC00649-210ENST00000599421 DOCK3Q8IZD9 2030 aa11.94□□□□□ -0.5
LINC00649-210ENST00000599421 IRF6O14896 467 aa11.93□□□□□ -0.5
LINC00649-210ENST00000599421 CRKP46108 304 aa11.93□□□□□ -0.5
LINC00649-210ENST00000599421 GJA8P48165 433 aa11.93□□□□□ -0.5
LINC00649-210ENST00000599421 RARSP54136 660 aaKnown RBP11.93□□□□□ -0.5
LINC00649-210ENST00000599421 LMBR1LQ6UX01 489 aa11.93□□□□□ -0.5
LINC00649-210ENST00000599421 C17orf99Q6UX52 265 aa11.93□□□□□ -0.5
LINC00649-210ENST00000599421 SRRDQ9UH36 339 aa11.93□□□□□ -0.5
LINC00649-210ENST00000599421 GRM8O00222 908 aa11.92□□□□□ -0.5
LINC00649-210ENST00000599421 PLIN1O60240 522 aa11.92□□□□□ -0.5
LINC00649-210ENST00000599421 GJB1P08034 283 aa11.92□□□□□ -0.5
LINC00649-210ENST00000599421 CTGFP29279 349 aa11.92□□□□□ -0.5
LINC00649-210ENST00000599421 GRK4P32298 578 aa11.92□□□□□ -0.5
LINC00649-210ENST00000599421 PPIL2Q13356 520 aa11.92□□□□□ -0.5
LINC00649-210ENST00000599421 ALDH1L2Q3SY69 923 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms