RNA–Protein interactions for RNA: ENST00000599362.5

SNRPA-206, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-206ENST00000599362 NBPF12Q5TAG4 269 aaPredicted RBP23.21■■□□□ 1.31
SNRPA-206ENST00000599362 DIEXFQ68CQ4 756 aaKnown RBP23.21■■□□□ 1.31
SNRPA-206ENST00000599362 MRIQ9BWK5 157 aa23.21■■□□□ 1.31
SNRPA-206ENST00000599362 TDRD3Q9H7E2 651 aaKnown RBP23.21■■□□□ 1.31
SNRPA-206ENST00000599362 COPRSQ9NQ92 184 aa23.21■■□□□ 1.31
SNRPA-206ENST00000599362 UNCXA6NJT0 531 aa23.2■■□□□ 1.3
SNRPA-206ENST00000599362 PPP1R12BO60237 982 aaPredicted RBP23.2■■□□□ 1.3
SNRPA-206ENST00000599362 TNFAIP1Q13829 316 aa23.2■■□□□ 1.3
SNRPA-206ENST00000599362 SIL1Q9H173 461 aa23.2■■□□□ 1.3
SNRPA-206ENST00000599362 FZD1Q9UP38 647 aa23.2■■□□□ 1.3
SNRPA-206ENST00000599362 BCAR3O75815 825 aa23.19■■□□□ 1.3
SNRPA-206ENST00000599362 GNAI3P08754 354 aa23.19■■□□□ 1.3
SNRPA-206ENST00000599362 TRIM27P14373 513 aa23.19■■□□□ 1.3
SNRPA-206ENST00000599362 IL15P40933 162 aaPredicted RBP23.19■■□□□ 1.3
SNRPA-206ENST00000599362 ATF7IPQ6VMQ6 1270 aa23.19■■□□□ 1.3
SNRPA-206ENST00000599362 CEP126Q9P2H0 1117 aa23.19■■□□□ 1.3
SNRPA-206ENST00000599362 MTX1Q13505 466 aa23.18■■□□□ 1.3
SNRPA-206ENST00000599362 SPRYD7Q5W111 196 aa23.18■■□□□ 1.3
SNRPA-206ENST00000599362 MCOLN1Q9GZU1 580 aa23.18■■□□□ 1.3
SNRPA-206ENST00000599362 PA2G4Q9UQ80 394 aaKnown RBP23.18■■□□□ 1.3
SNRPA-206ENST00000599362 ZBTB22O15209 634 aa23.17■■□□□ 1.3
SNRPA-206ENST00000599362 ATP2B3Q16720 1220 aa23.17■■□□□ 1.3
SNRPA-206ENST00000599362 TEKT1Q969V4 418 aa23.17■■□□□ 1.3
SNRPA-206ENST00000599362 ZDHHC15Q96MV8 337 aa23.17■■□□□ 1.3
SNRPA-206ENST00000599362 TEPSINQ96N21 525 aa23.17■■□□□ 1.3
SNRPA-206ENST00000599362 MAST3O60307 1309 aa23.16■■□□□ 1.3
SNRPA-206ENST00000599362 USP2O75604 605 aaPredicted RBP23.16■■□□□ 1.3
SNRPA-206ENST00000599362 HNRNPUQ00839 825 aaKnown RBP eCLIP23.16■■□□□ 1.3
SNRPA-206ENST00000599362 WDR66Q8TBY9 1149 aa23.16■■□□□ 1.3
SNRPA-206ENST00000599362 SLC10A4Q96EP9 437 aa23.16■■□□□ 1.3
SNRPA-206ENST00000599362 TNNQ9UQP3 1299 aa23.16■■□□□ 1.3
SNRPA-206ENST00000599362 SREBF2Q12772 1141 aa23.15■■□□□ 1.3
SNRPA-206ENST00000599362 MKRN3Q13064 507 aaKnown RBP23.15■■□□□ 1.3
SNRPA-206ENST00000599362 DGKZQ13574 1117 aa23.15■■□□□ 1.3
SNRPA-206ENST00000599362 CLMNQ96JQ2 1002 aa23.15■■□□□ 1.3
SNRPA-206ENST00000599362 TCP10L2B9ZVM9 353 aa23.14■■□□□ 1.29
SNRPA-206ENST00000599362 ZBTB48P10074 688 aaPredicted RBP23.14■■□□□ 1.29
SNRPA-206ENST00000599362 IREB2P48200 963 aaKnown RBP23.14■■□□□ 1.29
SNRPA-206ENST00000599362 APOBEC3HQ6NTF7 200 aaKnown RBP23.14■■□□□ 1.29
SNRPA-206ENST00000599362 HHIPL2Q6UWX4 724 aa23.14■■□□□ 1.29
SNRPA-206ENST00000599362 FRAT1Q92837 279 aaPredicted RBP23.14■■□□□ 1.29
SNRPA-206ENST00000599362 CFHR5Q9BXR6 569 aa23.14■■□□□ 1.29
SNRPA-206ENST00000599362 SRGAP3O43295 1099 aa23.13■■□□□ 1.29
SNRPA-206ENST00000599362 TNNI2P48788 182 aa23.13■■□□□ 1.29
SNRPA-206ENST00000599362 NOM1Q5C9Z4 860 aaKnown RBP23.13■■□□□ 1.29
SNRPA-206ENST00000599362 CDAN1Q8IWY9 1227 aa23.13■■□□□ 1.29
SNRPA-206ENST00000599362 WNK4Q96J92 1243 aa23.13■■□□□ 1.29
SNRPA-206ENST00000599362 MYH13Q9UKX3 1938 aa23.13■■□□□ 1.29
SNRPA-206ENST00000599362 LAMB1P07942 1786 aa23.12■■□□□ 1.29
SNRPA-206ENST00000599362 MANSC4A6NHS7 340 aaPredicted RBP23.12■■□□□ 1.29
SNRPA-206ENST00000599362 SEMA3EO15041 775 aa23.12■■□□□ 1.29
SNRPA-206ENST00000599362 FKBP1CQ5VVH2 108 aa23.12■■□□□ 1.29
SNRPA-206ENST00000599362 ANKRD13AQ8IZ07 590 aa23.12■■□□□ 1.29
SNRPA-206ENST00000599362 TMEM39BQ9GZU3 492 aa23.12■■□□□ 1.29
SNRPA-206ENST00000599362 GNL3LQ9NVN8 582 aaKnown RBP23.12■■□□□ 1.29
SNRPA-206ENST00000599362 SALL1Q9NSC2 1324 aa23.11■■□□□ 1.29
SNRPA-206ENST00000599362 TBC1D8O95759 1140 aa23.11■■□□□ 1.29
SNRPA-206ENST00000599362 PHKA1P46020 1223 aa23.11■■□□□ 1.29
SNRPA-206ENST00000599362 INHBEP58166 350 aa23.11■■□□□ 1.29
SNRPA-206ENST00000599362 GNAI2P04899 355 aa23.1■■□□□ 1.29
SNRPA-206ENST00000599362 ZKSCAN2Q63HK3 967 aa23.1■■□□□ 1.29
SNRPA-206ENST00000599362 FAM83AQ86UY5 434 aa23.1■■□□□ 1.29
SNRPA-206ENST00000599362 CLUAP1Q96AJ1 413 aa23.1■■□□□ 1.29
SNRPA-206ENST00000599362 DENND2AQ9ULE3 1009 aa23.1■■□□□ 1.29
SNRPA-206ENST00000599362 ADORA1P30542 326 aa23.09■■□□□ 1.29
SNRPA-206ENST00000599362 GJA5P36382 358 aa23.09■■□□□ 1.29
SNRPA-206ENST00000599362 CACNB3P54284 484 aa23.09■■□□□ 1.29
SNRPA-206ENST00000599362 CCDC102BQ68D86 513 aa23.09■■□□□ 1.29
SNRPA-206ENST00000599362 TMOD2Q9NZR1 351 aa23.09■■□□□ 1.29
SNRPA-206ENST00000599362 OTOFQ9HC10 1997 aa23.09■■□□□ 1.29
SNRPA-206ENST00000599362 CCDC85CA6NKD9 419 aa23.08■■□□□ 1.29
SNRPA-206ENST00000599362 ALDH1A1P00352 501 aa23.08■■□□□ 1.29
SNRPA-206ENST00000599362 PRDX5P30044 214 aa23.08■■□□□ 1.29
SNRPA-206ENST00000599362 TMEM57Q8N5G2 664 aa23.08■■□□□ 1.29
SNRPA-206ENST00000599362 ZNF296Q8WUU4 475 aaPredicted RBP23.08■■□□□ 1.29
SNRPA-206ENST00000599362 GPR25O00155 361 aa23.07■■□□□ 1.28
SNRPA-206ENST00000599362 TIMM10P62072 90 aa23.07■■□□□ 1.28
SNRPA-206ENST00000599362 TFCP2Q12800 502 aa23.07■■□□□ 1.28
SNRPA-206ENST00000599362 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.07■■□□□ 1.28
SNRPA-206ENST00000599362 CTU1Q7Z7A3 348 aaKnown RBP23.07■■□□□ 1.28
SNRPA-206ENST00000599362 IFNL1Q8IU54 200 aa23.07■■□□□ 1.28
SNRPA-206ENST00000599362 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.07■■□□□ 1.283e-7■□□□□ 8
SNRPA-206ENST00000599362 AKAP2Q9Y2D5 859 aa23.07■■□□□ 1.28
SNRPA-206ENST00000599362 DAGLAQ9Y4D2 1042 aa23.07■■□□□ 1.28
SNRPA-206ENST00000599362 PDS5AQ29RF7 1337 aaKnown RBP23.07■■□□□ 1.28
SNRPA-206ENST00000599362 ZBED9Q6R2W3 1325 aa23.07■■□□□ 1.28
SNRPA-206ENST00000599362 RPAP1Q9BWH6 1393 aaPredicted RBP23.06■■□□□ 1.28
SNRPA-206ENST00000599362 PNMA6EA0A0J9YXQ4 647 aa23.06■■□□□ 1.28
SNRPA-206ENST00000599362 A0A1B0GUL7 405 aa23.06■■□□□ 1.28
SNRPA-206ENST00000599362 LDHBP07195 334 aaKnown RBP23.06■■□□□ 1.28
SNRPA-206ENST00000599362 MAP3K9P80192 1104 aa23.06■■□□□ 1.28
SNRPA-206ENST00000599362 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.06■■□□□ 1.28
SNRPA-206ENST00000599362 TESPA1A2RU30 521 aaPredicted RBP23.05■■□□□ 1.28
SNRPA-206ENST00000599362 IGF2BP3O00425 579 aaKnown RBP eCLIP23.05■■□□□ 1.28
SNRPA-206ENST00000599362 DIXDC1Q155Q3 683 aa23.05■■□□□ 1.28
SNRPA-206ENST00000599362 XAGE2Q96GT9 111 aa23.05■■□□□ 1.28
SNRPA-206ENST00000599362 R3HDMLQ9H3Y0 253 aa23.05■■□□□ 1.28
SNRPA-206ENST00000599362 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.05■■□□□ 1.28
SNRPA-206ENST00000599362 RGS19P49795 217 aa23.04■■□□□ 1.28
SNRPA-206ENST00000599362 RASGRF1Q13972 1273 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms