RNA–Protein interactions for RNA: ENST00000599339.1

EBI3-202, Transcript of Epstein-Barr virus induced 3, humanhuman

TSL 2

Gene EBI3, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-202ENST00000599339 USP2O75604 605 aaPredicted RBP18.32■□□□□ 0.52
EBI3-202ENST00000599339 HDLBPQ00341 1268 aaKnown RBP18.32■□□□□ 0.52
EBI3-202ENST00000599339 CHAF1AQ13111 956 aaPredicted RBP18.32■□□□□ 0.52
EBI3-202ENST00000599339 IFIT1P09914 478 aaKnown RBP18.31■□□□□ 0.52
EBI3-202ENST00000599339 SLFN5Q08AF3 891 aa18.31■□□□□ 0.52
EBI3-202ENST00000599339 ALDH1L2Q3SY69 923 aa18.31■□□□□ 0.52
EBI3-202ENST00000599339 USP44Q9H0E7 712 aa18.31■□□□□ 0.52
EBI3-202ENST00000599339 IQSEC3Q9UPP2 1182 aaPredicted RBP18.31■□□□□ 0.52
EBI3-202ENST00000599339 PDE4DIPQ5VU43 2346 aa18.31■□□□□ 0.52
EBI3-202ENST00000599339 MAST3O60307 1309 aa18.3■□□□□ 0.52
EBI3-202ENST00000599339 KIF16BQ96L93 1317 aa18.3■□□□□ 0.52
EBI3-202ENST00000599339 TCP10L2B9ZVM9 353 aa18.3■□□□□ 0.52
EBI3-202ENST00000599339 PUM3Q15397 648 aaKnown RBP18.3■□□□□ 0.52
EBI3-202ENST00000599339 VGLL2Q8N8G2 317 aa18.3■□□□□ 0.52
EBI3-202ENST00000599339 TEKT1Q969V4 418 aa18.3■□□□□ 0.52
EBI3-202ENST00000599339 TMOD2Q9NZR1 351 aa18.3■□□□□ 0.52
EBI3-202ENST00000599339 LAMB1P07942 1786 aa18.3■□□□□ 0.52
EBI3-202ENST00000599339 IGF2BP3O00425 579 aaKnown RBP eCLIP18.29■□□□□ 0.52
EBI3-202ENST00000599339 R3HDMLQ9H3Y0 253 aa18.29■□□□□ 0.52
EBI3-202ENST00000599339 SMC4Q9NTJ3 1288 aa18.29■□□□□ 0.52
EBI3-202ENST00000599339 SUGT1Q9Y2Z0 365 aa18.29■□□□□ 0.52
EBI3-202ENST00000599339 KLHDC4Q8TBB5 520 aa18.28■□□□□ 0.52
EBI3-202ENST00000599339 TEPSINQ96N21 525 aa18.28■□□□□ 0.52
EBI3-202ENST00000599339 MRIQ9BWK5 157 aa18.28■□□□□ 0.52
EBI3-202ENST00000599339 ELP3Q9H9T3 547 aa18.28■□□□□ 0.52
EBI3-202ENST00000599339 EYA2O00167 538 aa18.27■□□□□ 0.52
EBI3-202ENST00000599339 SLC5A1P13866 664 aa18.27■□□□□ 0.52
EBI3-202ENST00000599339 BCAMP50895 628 aa18.27■□□□□ 0.52
EBI3-202ENST00000599339 MAP3K9P80192 1104 aa18.27■□□□□ 0.52
EBI3-202ENST00000599339 OPTNQ96CV9 577 aa18.27■□□□□ 0.52
EBI3-202ENST00000599339 HOOK2Q96ED9 719 aa18.27■□□□□ 0.52
EBI3-202ENST00000599339 ERO1AQ96HE7 468 aa18.27■□□□□ 0.52
EBI3-202ENST00000599339 TMEM39BQ9GZU3 492 aa18.27■□□□□ 0.52
EBI3-202ENST00000599339 HDAC5Q9UQL6 1122 aa18.27■□□□□ 0.52
EBI3-202ENST00000599339 TRIM17Q9Y577 477 aa18.27■□□□□ 0.52
EBI3-202ENST00000599339 CSADQ9Y600 493 aa18.27■□□□□ 0.52
EBI3-202ENST00000599339 OTOFQ9HC10 1997 aa18.26■□□□□ 0.51
EBI3-202ENST00000599339 TESPA1A2RU30 521 aaPredicted RBP18.26■□□□□ 0.51
EBI3-202ENST00000599339 CT47B1P0C2W7 299 aaPredicted RBP18.26■□□□□ 0.51
EBI3-202ENST00000599339 GJA5P36382 358 aa18.26■□□□□ 0.51
EBI3-202ENST00000599339 GRIK5Q16478 980 aa18.26■□□□□ 0.51
EBI3-202ENST00000599339 LPIN2Q92539 896 aa18.26■□□□□ 0.51
EBI3-202ENST00000599339 ZDHHC15Q96MV8 337 aa18.26■□□□□ 0.51
EBI3-202ENST00000599339 UBTFL1P0CB47 393 aaPredicted RBP18.25■□□□□ 0.51
EBI3-202ENST00000599339 FGFR2P21802 821 aa18.25■□□□□ 0.51
EBI3-202ENST00000599339 CRHR2Q13324 411 aa18.25■□□□□ 0.51
EBI3-202ENST00000599339 FKBP1CQ5VVH2 108 aa18.25■□□□□ 0.51
EBI3-202ENST00000599339 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.25■□□□□ 0.51
EBI3-202ENST00000599339 FAM83AQ86UY5 434 aa18.25■□□□□ 0.51
EBI3-202ENST00000599339 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.25■□□□□ 0.51
EBI3-202ENST00000599339 WDR66Q8TBY9 1149 aa18.25■□□□□ 0.51
EBI3-202ENST00000599339 FBXO3Q9UK99 471 aa18.25■□□□□ 0.51
EBI3-202ENST00000599339 RFX5P48382 616 aaPredicted RBP18.24■□□□□ 0.51
EBI3-202ENST00000599339 GTF2A2P52657 109 aa18.24■□□□□ 0.51
EBI3-202ENST00000599339 VGLL4Q14135 290 aa18.24■□□□□ 0.51
EBI3-202ENST00000599339 HHIPL2Q6UWX4 724 aa18.24■□□□□ 0.51
EBI3-202ENST00000599339 CDAN1Q8IWY9 1227 aa18.24■□□□□ 0.51
EBI3-202ENST00000599339 TNRC18O15417 2968 aaPredicted RBP18.24■□□□□ 0.51
EBI3-202ENST00000599339 WDHD1O75717 1129 aaPredicted RBP18.23■□□□□ 0.51
EBI3-202ENST00000599339 SLC34A2O95436 690 aa18.23■□□□□ 0.51
EBI3-202ENST00000599339 CACNB3P54284 484 aa18.23■□□□□ 0.51
EBI3-202ENST00000599339 OTOP1Q7RTM1 612 aa18.23■□□□□ 0.51
EBI3-202ENST00000599339 CDCA7LQ96GN5 454 aa18.23■□□□□ 0.51
EBI3-202ENST00000599339 PTPN18Q99952 460 aa18.23■□□□□ 0.51
EBI3-202ENST00000599339 API5Q9BZZ5 524 aaKnown RBP18.23■□□□□ 0.51
EBI3-202ENST00000599339 GNL3LQ9NVN8 582 aaKnown RBP18.23■□□□□ 0.51
EBI3-202ENST00000599339 MYH13Q9UKX3 1938 aa18.22■□□□□ 0.51
EBI3-202ENST00000599339 CCL15-CCL14A0A0B4J2E2 113 aa18.22■□□□□ 0.51
EBI3-202ENST00000599339 CIAO1O76071 339 aa18.22■□□□□ 0.51
EBI3-202ENST00000599339 SP3Q02447 781 aa18.22■□□□□ 0.51
EBI3-202ENST00000599339 ARHGEF6Q15052 776 aa18.22■□□□□ 0.51
EBI3-202ENST00000599339 CCL15Q16663 113 aa18.22■□□□□ 0.51
EBI3-202ENST00000599339 DCAF15Q66K64 600 aa18.22■□□□□ 0.51
EBI3-202ENST00000599339 INTS3Q68E01 1043 aaKnown RBP18.22■□□□□ 0.51
EBI3-202ENST00000599339 OTUD5Q96G74 571 aa18.22■□□□□ 0.51
EBI3-202ENST00000599339 MS4A4AQ96JQ5 239 aa18.22■□□□□ 0.51
EBI3-202ENST00000599339 CEP126Q9P2H0 1117 aa18.22■□□□□ 0.51
EBI3-202ENST00000599339 RPAP1Q9BWH6 1393 aaPredicted RBP18.21■□□□□ 0.51
EBI3-202ENST00000599339 SPDYE5A6NIY4 337 aa18.21■□□□□ 0.51
EBI3-202ENST00000599339 TAF1CQ15572 869 aaPredicted RBP18.21■□□□□ 0.51
EBI3-202ENST00000599339 ATP2B3Q16720 1220 aa18.21■□□□□ 0.51
EBI3-202ENST00000599339 APOBEC3HQ6NTF7 200 aaKnown RBP18.21■□□□□ 0.51
EBI3-202ENST00000599339 TRMT2AQ8IZ69 625 aaKnown RBP18.21■□□□□ 0.51
EBI3-202ENST00000599339 CD99L2Q8TCZ2 262 aa18.21■□□□□ 0.51
EBI3-202ENST00000599339 EFCC1Q9HA90 598 aa18.21■□□□□ 0.51
EBI3-202ENST00000599339 ZFYVE28Q9HCC9 887 aa18.21■□□□□ 0.51
EBI3-202ENST00000599339 ATG9AQ7Z3C6 839 aa18.2■□□□□ 0.5
EBI3-202ENST00000599339 ERO1BQ86YB8 467 aa18.2■□□□□ 0.5
EBI3-202ENST00000599339 CNKSR2Q8WXI2 1034 aa18.2■□□□□ 0.5
EBI3-202ENST00000599339 BRI3BPQ8WY22 251 aa18.2■□□□□ 0.5
EBI3-202ENST00000599339 WRNIP1Q96S55 665 aa18.2■□□□□ 0.5
EBI3-202ENST00000599339 SIL1Q9H173 461 aa18.2■□□□□ 0.5
EBI3-202ENST00000599339 NOB1Q9ULX3 412 aaKnown RBP18.2■□□□□ 0.5
EBI3-202ENST00000599339 PTPN22Q9Y2R2 807 aa18.2■□□□□ 0.5
EBI3-202ENST00000599339 CETPP11597 493 aa18.19■□□□□ 0.5
EBI3-202ENST00000599339 IL15P40933 162 aaPredicted RBP18.19■□□□□ 0.5
EBI3-202ENST00000599339 PRPF38BQ5VTL8 546 aaKnown RBP18.19■□□□□ 0.5
EBI3-202ENST00000599339 ZNF341Q9BYN7 854 aa18.19■□□□□ 0.5
EBI3-202ENST00000599339 SNCAIPQ9Y6H5 919 aa18.19■□□□□ 0.5
EBI3-202ENST00000599339 SEMA3EO15041 775 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms