RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-222ENST00000599144 PTPN22Q9Y2R2 807 aa24.28■■□□□ 1.48
IRF3-222ENST00000599144 RIPOR2Q9Y4F9 1068 aa24.28■■□□□ 1.48
IRF3-222ENST00000599144 ANP32CO43423 234 aa24.27■■□□□ 1.48
IRF3-222ENST00000599144 KLHDC4Q8TBB5 520 aa24.27■■□□□ 1.48
IRF3-222ENST00000599144 BRI3BPQ8WY22 251 aa24.27■■□□□ 1.48
IRF3-222ENST00000599144 ERO1AQ96HE7 468 aa24.27■■□□□ 1.48
IRF3-222ENST00000599144 MS4A4AQ96JQ5 239 aa24.27■■□□□ 1.48
IRF3-222ENST00000599144 TESPA1A2RU30 521 aaPredicted RBP24.26■■□□□ 1.47
IRF3-222ENST00000599144 TNFAIP1Q13829 316 aa24.26■■□□□ 1.47
IRF3-222ENST00000599144 VGLL4Q14135 290 aa24.26■■□□□ 1.47
IRF3-222ENST00000599144 EFCC1Q9HA90 598 aa24.26■■□□□ 1.47
IRF3-222ENST00000599144 SP3Q02447 781 aa24.25■■□□□ 1.47
IRF3-222ENST00000599144 OTUD7BQ6GQQ9 843 aa24.25■■□□□ 1.47
IRF3-222ENST00000599144 FBXO33Q7Z6M2 555 aa24.25■■□□□ 1.47
IRF3-222ENST00000599144 ANKRD44Q8N8A2 993 aa24.25■■□□□ 1.47
IRF3-222ENST00000599144 CCL15-CCL14A0A0B4J2E2 113 aa24.24■■□□□ 1.47
IRF3-222ENST00000599144 UNCXA6NJT0 531 aa24.24■■□□□ 1.47
IRF3-222ENST00000599144 CCL15Q16663 113 aa24.24■■□□□ 1.47
IRF3-222ENST00000599144 METTL24Q5JXM2 366 aa24.24■■□□□ 1.47
IRF3-222ENST00000599144 VPS37DQ86XT2 251 aa24.24■■□□□ 1.47
IRF3-222ENST00000599144 OTUD5Q96G74 571 aa24.24■■□□□ 1.47
IRF3-222ENST00000599144 FAM43AQ8N2R8 423 aa24.23■■□□□ 1.47
IRF3-222ENST00000599144 ECM29Q5VYK3 1845 aa24.23■■□□□ 1.47
IRF3-222ENST00000599144 MROH5Q6ZUA9 1318 aa24.22■■□□□ 1.47
IRF3-222ENST00000599144 FRAT2O75474 233 aaPredicted RBP24.22■■□□□ 1.47
IRF3-222ENST00000599144 ECM2O94769 699 aaPredicted RBP24.22■■□□□ 1.47
IRF3-222ENST00000599144 EN2P19622 333 aaPredicted RBP24.22■■□□□ 1.47
IRF3-222ENST00000599144 BCAMP50895 628 aa24.22■■□□□ 1.47
IRF3-222ENST00000599144 MAP3K9P80192 1104 aa24.22■■□□□ 1.47
IRF3-222ENST00000599144 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.22■■□□□ 1.474e-6■■■■□ 20.6
IRF3-222ENST00000599144 OTOFQ9HC10 1997 aa24.22■■□□□ 1.47
IRF3-222ENST00000599144 UTYO14607 1347 aa24.21■■□□□ 1.47
IRF3-222ENST00000599144 MYCP01106 439 aaPredicted RBP24.21■■□□□ 1.47
IRF3-222ENST00000599144 TAF1CQ15572 869 aaPredicted RBP24.21■■□□□ 1.47
IRF3-222ENST00000599144 PCDH10Q9P2E7 1040 aa24.21■■□□□ 1.47
IRF3-222ENST00000599144 TNNI2P48788 182 aa24.2■■□□□ 1.46
IRF3-222ENST00000599144 RABL6Q3YEC7 729 aaPredicted RBP24.2■■□□□ 1.46
IRF3-222ENST00000599144 MRPL50Q8N5N7 158 aaKnown RBP24.2■■□□□ 1.46
IRF3-222ENST00000599144 VGLL2Q8N8G2 317 aa24.2■■□□□ 1.46
IRF3-222ENST00000599144 ZKSCAN4Q969J2 545 aaPredicted RBP24.19■■□□□ 1.46
IRF3-222ENST00000599144 ARMC5Q96C12 935 aa24.19■■□□□ 1.46
IRF3-222ENST00000599144 CSADQ9Y600 493 aa24.19■■□□□ 1.46
IRF3-222ENST00000599144 PTCH2Q9Y6C5 1203 aa24.19■■□□□ 1.46
IRF3-222ENST00000599144 SNCAIPQ9Y6H5 919 aa24.19■■□□□ 1.46
IRF3-222ENST00000599144 HTTP42858 3142 aa24.18■■□□□ 1.46
IRF3-222ENST00000599144 CAVIN4Q5BKX8 364 aa24.18■■□□□ 1.46
IRF3-222ENST00000599144 INTS3Q68E01 1043 aaKnown RBP24.18■■□□□ 1.46
IRF3-222ENST00000599144 TEKT1Q969V4 418 aa24.18■■□□□ 1.46
IRF3-222ENST00000599144 ARHGAP39Q9C0H5 1083 aa24.18■■□□□ 1.46
IRF3-222ENST00000599144 PDE8BO95263 885 aa24.17■■□□□ 1.46
IRF3-222ENST00000599144 GTF2A2P52657 109 aa24.17■■□□□ 1.46
IRF3-222ENST00000599144 ZFYVE28Q9HCC9 887 aa24.17■■□□□ 1.46
IRF3-222ENST00000599144 APOBEC3HQ6NTF7 200 aaKnown RBP24.16■■□□□ 1.46
IRF3-222ENST00000599144 WRNIP1Q96S55 665 aa24.16■■□□□ 1.46
IRF3-222ENST00000599144 CACNA1FO60840 1977 aa24.15■■□□□ 1.46
IRF3-222ENST00000599144 SPDYE5A6NIY4 337 aa24.15■■□□□ 1.46
IRF3-222ENST00000599144 MIGA2Q7L4E1 593 aa24.15■■□□□ 1.46
IRF3-222ENST00000599144 ZNF521Q96K83 1311 aa24.14■■□□□ 1.46
IRF3-222ENST00000599144 BTBD19C9JJ37 291 aa24.14■■□□□ 1.45
IRF3-222ENST00000599144 TBC1D22AQ8WUA7 517 aa24.14■■□□□ 1.45
IRF3-222ENST00000599144 ZNF333Q96JL9 665 aa24.14■■□□□ 1.45
IRF3-222ENST00000599144 LAMB1P07942 1786 aa24.14■■□□□ 1.45
IRF3-222ENST00000599144 ARAP2Q8WZ64 1704 aa24.13■■□□□ 1.45
IRF3-222ENST00000599144 IRF6O14896 467 aa24.13■■□□□ 1.45
IRF3-222ENST00000599144 HDLBPQ00341 1268 aaKnown RBP24.13■■□□□ 1.45
IRF3-222ENST00000599144 SSH1Q8WYL5 1049 aa24.13■■□□□ 1.45
IRF3-222ENST00000599144 ZDHHC15Q96MV8 337 aa24.13■■□□□ 1.45
IRF3-222ENST00000599144 USP44Q9H0E7 712 aa24.13■■□□□ 1.45
IRF3-222ENST00000599144 TMOD2Q9NZR1 351 aa24.13■■□□□ 1.45
IRF3-222ENST00000599144 FGFR2P21802 821 aa24.12■■□□□ 1.45
IRF3-222ENST00000599144 INPP5BP32019 993 aa24.12■■□□□ 1.45
IRF3-222ENST00000599144 SH3TC2Q8TF17 1288 aa24.12■■□□□ 1.45
IRF3-222ENST00000599144 ZNF316A6NFI3 1004 aaPredicted RBP24.11■■□□□ 1.45
IRF3-222ENST00000599144 RFX5P48382 616 aaPredicted RBP24.11■■□□□ 1.45
IRF3-222ENST00000599144 PUM3Q15397 648 aaKnown RBP24.11■■□□□ 1.45
IRF3-222ENST00000599144 SLC9C1Q4G0N8 1177 aa24.11■■□□□ 1.45
IRF3-222ENST00000599144 HABP4Q5JVS0 413 aaKnown RBP24.11■■□□□ 1.45
IRF3-222ENST00000599144 ERO1BQ86YB8 467 aa24.11■■□□□ 1.45
IRF3-222ENST00000599144 TMEM106CQ9BVX2 250 aa24.11■■□□□ 1.45
IRF3-222ENST00000599144 IFIT1P09914 478 aaKnown RBP24.1■■□□□ 1.45
IRF3-222ENST00000599144 CETPP11597 493 aa24.1■■□□□ 1.45
IRF3-222ENST00000599144 TCP10Q12799 353 aa24.1■■□□□ 1.45
IRF3-222ENST00000599144 DIXDC1Q155Q3 683 aa24.1■■□□□ 1.45
IRF3-222ENST00000599144 SLC4A8Q2Y0W8 1093 aa24.09■■□□□ 1.45
IRF3-222ENST00000599144 FAM83AQ86UY5 434 aa24.09■■□□□ 1.45
IRF3-222ENST00000599144 ZSWIM8A7E2V4 1837 aa24.08■■□□□ 1.45
IRF3-222ENST00000599144 EYA2O00167 538 aa24.08■■□□□ 1.45
IRF3-222ENST00000599144 TLR2O60603 784 aa24.08■■□□□ 1.45
IRF3-222ENST00000599144 NFIAQ12857 509 aa24.08■■□□□ 1.45
IRF3-222ENST00000599144 SNAPC2Q13487 334 aa24.08■■□□□ 1.45
IRF3-222ENST00000599144 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.08■■□□□ 1.45
IRF3-222ENST00000599144 SIL1Q9H173 461 aa24.08■■□□□ 1.45
IRF3-222ENST00000599144 CPA4Q9UI42 421 aa24.08■■□□□ 1.45
IRF3-222ENST00000599144 PTPRCP08575 1304 aa24.08■■□□□ 1.44
IRF3-222ENST00000599144 CTGFP29279 349 aa24.07■■□□□ 1.44
IRF3-222ENST00000599144 LACTBP83111 547 aaPredicted RBP24.07■■□□□ 1.44
IRF3-222ENST00000599144 PPIL2Q13356 520 aa24.07■■□□□ 1.44
IRF3-222ENST00000599144 HHIPL2Q6UWX4 724 aa24.07■■□□□ 1.44
IRF3-222ENST00000599144 GCC1Q96CN9 775 aa24.07■■□□□ 1.44
IRF3-222ENST00000599144 ZNF341Q9BYN7 854 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms