RNA–Protein interactions for RNA: ENST00000598969.5

COPE-208, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 5

Gene COPE, Length 1,770 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-208ENST00000598969 NIM1KQ8IY84 436 aa25.18■■□□□ 1.62
COPE-208ENST00000598969 NSUN4Q96CB9 384 aaKnown RBP25.18■■□□□ 1.62
COPE-208ENST00000598969 MXD3Q9BW11 206 aa25.18■■□□□ 1.62
COPE-208ENST00000598969 C22orf23Q9BZE7 217 aa25.18■■□□□ 1.62
COPE-208ENST00000598969 HELLSQ9NRZ9 838 aa25.18■■□□□ 1.62
COPE-208ENST00000598969 LDHBP07195 334 aaKnown RBP25.18■■□□□ 1.62
COPE-208ENST00000598969 MECOMQ03112 1051 aa25.18■■□□□ 1.62
COPE-208ENST00000598969 MCMDC2Q4G0Z9 681 aa25.18■■□□□ 1.62
COPE-208ENST00000598969 DACT2Q5SW24 774 aa25.18■■□□□ 1.62
COPE-208ENST00000598969 ZNF589Q86UQ0 364 aaPredicted RBP25.18■■□□□ 1.62
COPE-208ENST00000598969 IPO9Q96P70 1041 aaKnown RBP25.18■■□□□ 1.62
COPE-208ENST00000598969 USP17L3A6NCW0 530 aa25.17■■□□□ 1.62
COPE-208ENST00000598969 USP17L4A6NCW7 530 aa25.17■■□□□ 1.62
COPE-208ENST00000598969 USP17L1Q7RTZ2 530 aa25.17■■□□□ 1.62
COPE-208ENST00000598969 PUS7LQ9H0K6 701 aaKnown RBP25.17■■□□□ 1.62
COPE-208ENST00000598969 ZNRF3Q9ULT6 936 aa25.17■■□□□ 1.62
COPE-208ENST00000598969 MAST3O60307 1309 aa25.17■■□□□ 1.62
COPE-208ENST00000598969 MAST2Q6P0Q8 1798 aa25.16■■□□□ 1.62
COPE-208ENST00000598969 M0R2C6 588 aa25.16■■□□□ 1.62
COPE-208ENST00000598969 IGSF3O75054 1194 aa25.16■■□□□ 1.62
COPE-208ENST00000598969 PSME4Q14997 1843 aa25.16■■□□□ 1.62
COPE-208ENST00000598969 CCDC129Q6ZRS4 1044 aa25.16■■□□□ 1.62
COPE-208ENST00000598969 ADGRA1Q86SQ6 560 aa25.16■■□□□ 1.62
COPE-208ENST00000598969 CYP7A1P22680 504 aa25.15■■□□□ 1.62
COPE-208ENST00000598969 FKBP1AP62942 108 aaKnown RBP25.15■■□□□ 1.62
COPE-208ENST00000598969 NAA16Q6N069 864 aaPredicted RBP25.15■■□□□ 1.62
COPE-208ENST00000598969 CCDC88AQ3V6T2 1871 aa25.15■■□□□ 1.62
COPE-208ENST00000598969 DZIP1Q86YF9 867 aaKnown RBP25.14■■□□□ 1.62
COPE-208ENST00000598969 JDP2Q8WYK2 163 aa25.14■■□□□ 1.62
COPE-208ENST00000598969 SUGT1Q9Y2Z0 365 aa25.14■■□□□ 1.62
COPE-208ENST00000598969 RAD17O75943 681 aa25.13■■□□□ 1.61
COPE-208ENST00000598969 REC8O95072 547 aa25.13■■□□□ 1.61
COPE-208ENST00000598969 LSG1Q9H089 658 aaKnown RBP25.13■■□□□ 1.61
COPE-208ENST00000598969 CCDC171Q6TFL3 1326 aa25.13■■□□□ 1.61
COPE-208ENST00000598969 TMED8Q6PL24 325 aaPredicted RBP25.12■■□□□ 1.61
COPE-208ENST00000598969 ANO2Q9NQ90 1003 aa25.12■■□□□ 1.61
COPE-208ENST00000598969 PSMD14O00487 310 aa25.11■■□□□ 1.61
COPE-208ENST00000598969 VIL1P09327 827 aaKnown RBP25.11■■□□□ 1.61
COPE-208ENST00000598969 RBM25P49756 843 aaKnown RBP25.11■■□□□ 1.61
COPE-208ENST00000598969 CXCL9Q07325 125 aa25.11■■□□□ 1.61
COPE-208ENST00000598969 DIXDC1Q155Q3 683 aa25.11■■□□□ 1.61
COPE-208ENST00000598969 USP26Q9BXU7 913 aa25.11■■□□□ 1.61
COPE-208ENST00000598969 SBF1O95248 1867 aa25.11■■□□□ 1.61
COPE-208ENST00000598969 LMNB1P20700 586 aa25.1■■□□□ 1.61
COPE-208ENST00000598969 PTH1RQ03431 593 aa25.1■■□□□ 1.61
COPE-208ENST00000598969 GPAA1O43292 621 aa25.1■■□□□ 1.61
COPE-208ENST00000598969 MIGA1Q8NAN2 632 aa25.1■■□□□ 1.61
COPE-208ENST00000598969 F8W031 263 aaPredicted RBP25.09■■□□□ 1.61
COPE-208ENST00000598969 FZD9O00144 591 aa25.09■■□□□ 1.61
COPE-208ENST00000598969 GPR162Q16538 588 aa25.09■■□□□ 1.61
COPE-208ENST00000598969 RSBN1LQ6PCB5 846 aaPredicted RBP25.09■■□□□ 1.61
COPE-208ENST00000598969 MBD4O95243 580 aa25.08■■□□□ 1.61
COPE-208ENST00000598969 GSTO1P78417 241 aa25.08■■□□□ 1.61
COPE-208ENST00000598969 KIAA1211Q6ZU35 1233 aa25.08■■□□□ 1.61
COPE-208ENST00000598969 STRBPQ96SI9 672 aaKnown RBP25.08■■□□□ 1.61
COPE-208ENST00000598969 RIOK1Q9BRS2 568 aaKnown RBP25.08■■□□□ 1.61
COPE-208ENST00000598969 TTF2Q9UNY4 1162 aaKnown RBP25.08■■□□□ 1.61
COPE-208ENST00000598969 DICER1Q9UPY3 1922 aaKnown RBP25.08■■□□□ 1.61
COPE-208ENST00000598969 VPS53Q5VIR6 699 aa25.08■■□□□ 1.6
COPE-208ENST00000598969 AIDAQ96BJ3 306 aa25.08■■□□□ 1.6
COPE-208ENST00000598969 GMLQ99445 158 aa25.08■■□□□ 1.6
COPE-208ENST00000598969 MYH2Q9UKX2 1941 aa25.07■■□□□ 1.6
COPE-208ENST00000598969 MROH7-TTC4A0A0A0MT08 1334 aa25.07■■□□□ 1.6
COPE-208ENST00000598969 FOXP2O15409 715 aa25.07■■□□□ 1.6
COPE-208ENST00000598969 CIAPIN1Q6FI81 312 aa25.07■■□□□ 1.6
COPE-208ENST00000598969 KIAA0825Q8IV33 1275 aa25.07■■□□□ 1.6
COPE-208ENST00000598969 LCORLQ8N3X6 602 aa25.07■■□□□ 1.6
COPE-208ENST00000598969 FAM163AQ96GL9 167 aaPredicted RBP25.07■■□□□ 1.6
COPE-208ENST00000598969 ARMT1Q9H993 441 aa25.07■■□□□ 1.6
COPE-208ENST00000598969 GAKO14976 1311 aa25.06■■□□□ 1.6
COPE-208ENST00000598969 MAGEB6P1A0A0J9YX57 407 aa25.06■■□□□ 1.6
COPE-208ENST00000598969 LDHCP07864 332 aa25.06■■□□□ 1.6
COPE-208ENST00000598969 DYNLL1P63167 89 aaKnown RBP25.06■■□□□ 1.6
COPE-208ENST00000598969 MYO3BQ8WXR4 1341 aa25.06■■□□□ 1.6
COPE-208ENST00000598969 EPB41L2O43491 1005 aaKnown RBP25.05■■□□□ 1.6
COPE-208ENST00000598969 SCNN1DP51172 638 aa25.05■■□□□ 1.6
COPE-208ENST00000598969 MAP4K1Q92918 833 aa25.05■■□□□ 1.6
COPE-208ENST00000598969 DAXXQ9UER7 740 aaPredicted RBP25.05■■□□□ 1.6
COPE-208ENST00000598969 ZBTB12Q9Y330 459 aaPredicted RBP25.05■■□□□ 1.6
COPE-208ENST00000598969 HSPD1P10809 573 aaKnown RBP25.05■■□□□ 1.6
COPE-208ENST00000598969 SLF2Q8IX21 1173 aa25.04■■□□□ 1.6
COPE-208ENST00000598969 DSCC1Q9BVC3 393 aa25.04■■□□□ 1.6
COPE-208ENST00000598969 AATFQ9NY61 560 aaKnown RBP eCLIP25.04■■□□□ 1.6
COPE-208ENST00000598969 DAGLAQ9Y4D2 1042 aa25.04■■□□□ 1.6
COPE-208ENST00000598969 ZNF541Q9H0D2 1346 aa25.04■■□□□ 1.6
COPE-208ENST00000598969 GPR75-ASB3A0A0A6YYF3 556 aa25.03■■□□□ 1.6
COPE-208ENST00000598969 EIF6P56537 245 aaKnown RBP25.03■■□□□ 1.6
COPE-208ENST00000598969 TNIP1Q15025 636 aa25.03■■□□□ 1.6
COPE-208ENST00000598969 MRIQ9BWK5 157 aa25.03■■□□□ 1.6
COPE-208ENST00000598969 UTRNP46939 3433 aa25.03■■□□□ 1.6
COPE-208ENST00000598969 PPP4CP60510 307 aa25.03■■□□□ 1.6
COPE-208ENST00000598969 HHIPL2Q6UWX4 724 aa25.03■■□□□ 1.6
COPE-208ENST00000598969 AGBL3Q8NEM8 1001 aa25.03■■□□□ 1.6
COPE-208ENST00000598969 RNF181Q9P0P0 153 aa25.03■■□□□ 1.6
COPE-208ENST00000598969 ADAMTSL1Q8N6G6 1762 aa25.02■■□□□ 1.6
COPE-208ENST00000598969 PRKAB2O43741 272 aa25.02■■□□□ 1.6
COPE-208ENST00000598969 GRIN3BO60391 1043 aa25.02■■□□□ 1.6
COPE-208ENST00000598969 HDLBPQ00341 1268 aaKnown RBP25.02■■□□□ 1.6
COPE-208ENST00000598969 RBM8AQ9Y5S9 174 aaKnown RBP25.02■■□□□ 1.6
COPE-208ENST00000598969 BTDP43251 543 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms