RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 PHAXQ9H814 394 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-218ENST00000598907 SRRDQ9UH36 339 aa17.73■□□□□ 0.43
SHKBP1-218ENST00000598907 CPA4Q9UI42 421 aa17.73■□□□□ 0.43
SHKBP1-218ENST00000598907 LEMD3Q9Y2U8 911 aa17.73■□□□□ 0.43
SHKBP1-218ENST00000598907 CSADQ9Y600 493 aa17.73■□□□□ 0.43
SHKBP1-218ENST00000598907 MYPNQ86TC9 1320 aa17.72■□□□□ 0.43
SHKBP1-218ENST00000598907 FMNL1O95466 1100 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-218ENST00000598907 OSBPP22059 807 aa17.72■□□□□ 0.43
SHKBP1-218ENST00000598907 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.72■□□□□ 0.43
SHKBP1-218ENST00000598907 BTBD19C9JJ37 291 aa17.71■□□□□ 0.43
SHKBP1-218ENST00000598907 CHL1O00533 1208 aa17.71■□□□□ 0.43
SHKBP1-218ENST00000598907 UBXN2AP68543 259 aa17.71■□□□□ 0.43
SHKBP1-218ENST00000598907 TTLL11Q8NHH1 800 aa17.71■□□□□ 0.43
SHKBP1-218ENST00000598907 UNC93B1Q9H1C4 597 aa17.71■□□□□ 0.43
SHKBP1-218ENST00000598907 CD209Q9NNX6 404 aa17.71■□□□□ 0.43
SHKBP1-218ENST00000598907 IL16Q14005 1332 aa17.71■□□□□ 0.42
SHKBP1-218ENST00000598907 ARAP2Q8WZ64 1704 aa17.7■□□□□ 0.42
SHKBP1-218ENST00000598907 CETPP11597 493 aa17.7■□□□□ 0.42
SHKBP1-218ENST00000598907 IGHMBP2P38935 993 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-218ENST00000598907 MAP3K9P80192 1104 aa17.7■□□□□ 0.42
SHKBP1-218ENST00000598907 ALPK3Q96L96 1907 aa17.7■□□□□ 0.42
SHKBP1-218ENST00000598907 HOXB7P09629 217 aa17.69■□□□□ 0.42
SHKBP1-218ENST00000598907 TNFAIP1Q13829 316 aa17.69■□□□□ 0.42
SHKBP1-218ENST00000598907 DUSP27Q5VZP5 1158 aa17.69■□□□□ 0.42
SHKBP1-218ENST00000598907 MTMR10Q9NXD2 777 aa17.69■□□□□ 0.42
SHKBP1-218ENST00000598907 ZMYND8Q9ULU4 1186 aaPredicted RBP17.69■□□□□ 0.42
SHKBP1-218ENST00000598907 SPDYE5A6NIY4 337 aa17.68■□□□□ 0.42
SHKBP1-218ENST00000598907 TCP10L2B9ZVM9 353 aa17.68■□□□□ 0.42
SHKBP1-218ENST00000598907 SNAP23O00161 211 aa17.68■□□□□ 0.42
SHKBP1-218ENST00000598907 ZNF853P0CG23 659 aa17.68■□□□□ 0.42
SHKBP1-218ENST00000598907 HOXD10P28358 340 aa17.68■□□□□ 0.42
SHKBP1-218ENST00000598907 CALD1Q05682 793 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-218ENST00000598907 C7orf61Q8IZ16 206 aa17.68■□□□□ 0.42
SHKBP1-218ENST00000598907 TRMT2AQ8IZ69 625 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-218ENST00000598907 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.68■□□□□ 0.42
SHKBP1-218ENST00000598907 TMEM39BQ9GZU3 492 aa17.68■□□□□ 0.42
SHKBP1-218ENST00000598907 ANKRD2Q9GZV1 360 aa17.68■□□□□ 0.42
SHKBP1-218ENST00000598907 TDRD3Q9H7E2 651 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-218ENST00000598907 SPINK5Q9NQ38 1064 aaPredicted RBP17.68■□□□□ 0.42
SHKBP1-218ENST00000598907 ZNF70Q9UC06 446 aaPredicted RBP17.68■□□□□ 0.42
SHKBP1-218ENST00000598907 PRKCZQ05513 592 aa17.67■□□□□ 0.42
SHKBP1-218ENST00000598907 SLFN5Q08AF3 891 aa17.67■□□□□ 0.42
SHKBP1-218ENST00000598907 SPDYE2Q495Y8 402 aa17.67■□□□□ 0.42
SHKBP1-218ENST00000598907 GPR153Q6NV75 609 aa17.67■□□□□ 0.42
SHKBP1-218ENST00000598907 TEPSINQ96N21 525 aa17.67■□□□□ 0.42
SHKBP1-218ENST00000598907 SNCAIPQ9Y6H5 919 aa17.67■□□□□ 0.42
SHKBP1-218ENST00000598907 IRF6O14896 467 aa17.66■□□□□ 0.42
SHKBP1-218ENST00000598907 SGPL1O95470 568 aa17.66■□□□□ 0.42
SHKBP1-218ENST00000598907 BCAMP50895 628 aa17.66■□□□□ 0.42
SHKBP1-218ENST00000598907 SNAPC2Q13487 334 aa17.66■□□□□ 0.42
SHKBP1-218ENST00000598907 C17orf99Q6UX52 265 aa17.66■□□□□ 0.42
SHKBP1-218ENST00000598907 CDCA7LQ96GN5 454 aa17.66■□□□□ 0.42
SHKBP1-218ENST00000598907 MPHOSPH8Q99549 860 aa17.66■□□□□ 0.42
SHKBP1-218ENST00000598907 GDF15Q99988 308 aa17.66■□□□□ 0.42
SHKBP1-218ENST00000598907 METTL22Q9BUU2 404 aaPredicted RBP17.66■□□□□ 0.42
SHKBP1-218ENST00000598907 ZCCHC17Q9NP64 241 aaKnown RBP17.66■□□□□ 0.42
SHKBP1-218ENST00000598907 TFRCP02786 760 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-218ENST00000598907 CHRNDQ07001 517 aa17.65■□□□□ 0.42
SHKBP1-218ENST00000598907 DEFB118Q96PH6 123 aa17.65■□□□□ 0.42
SHKBP1-218ENST00000598907 WRNIP1Q96S55 665 aa17.65■□□□□ 0.42
SHKBP1-218ENST00000598907 IFT57Q9NWB7 429 aa17.65■□□□□ 0.42
SHKBP1-218ENST00000598907 A0A1B0GUL6 1792 aa17.64■□□□□ 0.41
SHKBP1-218ENST00000598907 E9PSI1 815 aa17.64■□□□□ 0.41
SHKBP1-218ENST00000598907 SYN1P17600 705 aa17.64■□□□□ 0.41
SHKBP1-218ENST00000598907 GNAI1P63096 354 aa17.64■□□□□ 0.41
SHKBP1-218ENST00000598907 ZNF804AQ7Z570 1209 aa17.64■□□□□ 0.41
SHKBP1-218ENST00000598907 SLAIN1Q8ND83 568 aa17.64■□□□□ 0.41
SHKBP1-218ENST00000598907 ZKSCAN4Q969J2 545 aaPredicted RBP17.64■□□□□ 0.41
SHKBP1-218ENST00000598907 PAWRQ96IZ0 340 aaKnown RBP17.64■□□□□ 0.41
SHKBP1-218ENST00000598907 TAF5LO75529 589 aa17.63■□□□□ 0.41
SHKBP1-218ENST00000598907 ELNP15502 786 aa17.63■□□□□ 0.41
SHKBP1-218ENST00000598907 ITGA6P23229 1130 aa17.63■□□□□ 0.41
SHKBP1-218ENST00000598907 ERO1BQ86YB8 467 aa17.63■□□□□ 0.41
SHKBP1-218ENST00000598907 HELBQ8NG08 1087 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-218ENST00000598907 DIS3LQ8TF46 1054 aaKnown RBP17.63■□□□□ 0.41
SHKBP1-218ENST00000598907 GABRQQ9UN88 632 aa17.63■□□□□ 0.41
SHKBP1-218ENST00000598907 MAP3K2Q9Y2U5 619 aa17.63■□□□□ 0.41
SHKBP1-218ENST00000598907 PDHXO00330 501 aa17.62■□□□□ 0.41
SHKBP1-218ENST00000598907 ELL2O00472 640 aaPredicted RBP17.62■□□□□ 0.41
SHKBP1-218ENST00000598907 INHAP05111 366 aa17.62■□□□□ 0.41
SHKBP1-218ENST00000598907 BMP8BP34820 402 aa17.62■□□□□ 0.41
SHKBP1-218ENST00000598907 TNNI2P48788 182 aa17.62■□□□□ 0.41
SHKBP1-218ENST00000598907 PPIL2Q13356 520 aa17.62■□□□□ 0.41
SHKBP1-218ENST00000598907 UBE3BQ7Z3V4 1068 aa17.62■□□□□ 0.41
SHKBP1-218ENST00000598907 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.62■□□□□ 0.41
SHKBP1-218ENST00000598907 TTF2Q9UNY4 1162 aaKnown RBP17.62■□□□□ 0.41
SHKBP1-218ENST00000598907 RPTORQ8N122 1335 aa17.62■□□□□ 0.41
SHKBP1-218ENST00000598907 ADGRA2Q96PE1 1338 aa17.62■□□□□ 0.41
SHKBP1-218ENST00000598907 IRS2Q9Y4H2 1338 aa17.62■□□□□ 0.41
SHKBP1-218ENST00000598907 MGAMO43451 1857 aa17.61■□□□□ 0.41
SHKBP1-218ENST00000598907 ADCY3O60266 1144 aa17.61■□□□□ 0.41
SHKBP1-218ENST00000598907 DDX58O95786 925 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-218ENST00000598907 IGKV5-2P06315 115 aa17.61■□□□□ 0.41
SHKBP1-218ENST00000598907 CACNB3P54284 484 aa17.61■□□□□ 0.41
SHKBP1-218ENST00000598907 FCGRTP55899 365 aa17.61■□□□□ 0.41
SHKBP1-218ENST00000598907 CWF19L2Q2TBE0 894 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-218ENST00000598907 LRIT3Q3SXY7 679 aa17.61■□□□□ 0.41
SHKBP1-218ENST00000598907 TDHQ8IZJ6 230 aa17.61■□□□□ 0.41
SHKBP1-218ENST00000598907 PRDM6Q9NQX0 595 aa17.61■□□□□ 0.41
SHKBP1-218ENST00000598907 TAOK2Q9UL54 1235 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms