RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 ADM5C9JUS6 153 aa21.72■■□□□ 1.07
USHBP1-209ENST00000598570 CRKP46108 304 aa21.72■■□□□ 1.07
USHBP1-209ENST00000598570 AAMPQ13685 434 aa21.72■■□□□ 1.07
USHBP1-209ENST00000598570 SAPCD2Q86UD0 394 aa21.72■■□□□ 1.07
USHBP1-209ENST00000598570 APOBEC3FQ8IUX4 373 aaKnown RBP21.72■■□□□ 1.07
USHBP1-209ENST00000598570 RHPN1Q8TCX5 695 aa21.72■■□□□ 1.07
USHBP1-209ENST00000598570 NEUROD6Q96NK8 337 aa21.72■■□□□ 1.07
USHBP1-209ENST00000598570 HMG20BQ9P0W2 317 aa21.72■■□□□ 1.07
USHBP1-209ENST00000598570 DBNLQ9UJU6 430 aaKnown RBP21.72■■□□□ 1.07
USHBP1-209ENST00000598570 MAST3O60307 1309 aa21.72■■□□□ 1.07
USHBP1-209ENST00000598570 F8W031 263 aaPredicted RBP21.71■■□□□ 1.07
USHBP1-209ENST00000598570 CELF2O95319 508 aaKnown RBP21.71■■□□□ 1.07
USHBP1-209ENST00000598570 UQCRFS1P1P0C7P4 283 aa21.71■■□□□ 1.07
USHBP1-209ENST00000598570 SPDYE2Q495Y8 402 aa21.71■■□□□ 1.07
USHBP1-209ENST00000598570 APOBEC3HQ6NTF7 200 aaKnown RBP21.71■■□□□ 1.07
USHBP1-209ENST00000598570 DBNDD2Q9BQY9 259 aa21.71■■□□□ 1.07
USHBP1-209ENST00000598570 DCTPP1Q9H773 170 aa21.71■■□□□ 1.07
USHBP1-209ENST00000598570 OS9Q13438 667 aaPredicted RBP21.7■■□□□ 1.06
USHBP1-209ENST00000598570 FKBP1CQ5VVH2 108 aa21.7■■□□□ 1.06
USHBP1-209ENST00000598570 ZGPATQ8N5A5 531 aaKnown RBP21.7■■□□□ 1.06
USHBP1-209ENST00000598570 SPATA5Q8NB90 893 aa21.7■■□□□ 1.06
USHBP1-209ENST00000598570 TEKT1Q969V4 418 aa21.7■■□□□ 1.06
USHBP1-209ENST00000598570 KIF1BPQ96EK5 621 aa21.7■■□□□ 1.06
USHBP1-209ENST00000598570 CDCA5Q96FF9 252 aa21.7■■□□□ 1.06
USHBP1-209ENST00000598570 PCDHB15Q9Y5E8 787 aa21.7■■□□□ 1.06
USHBP1-209ENST00000598570 PPP2R3BQ9Y5P8 575 aa21.7■■□□□ 1.06
USHBP1-209ENST00000598570 PRDX5P30044 214 aa21.69■■□□□ 1.06
USHBP1-209ENST00000598570 MCAMP43121 646 aa21.69■■□□□ 1.06
USHBP1-209ENST00000598570 FKBP1BP68106 108 aa21.69■■□□□ 1.06
USHBP1-209ENST00000598570 ZNF70Q9UC06 446 aaPredicted RBP21.68■■□□□ 1.06
USHBP1-209ENST00000598570 GAKO14976 1311 aa21.67■■□□□ 1.06
USHBP1-209ENST00000598570 MYO1BO43795 1136 aa21.67■■□□□ 1.06
USHBP1-209ENST00000598570 LDHBP07195 334 aaKnown RBP21.67■■□□□ 1.06
USHBP1-209ENST00000598570 DEFB115Q30KQ5 88 aa21.67■■□□□ 1.06
USHBP1-209ENST00000598570 SPTY2D1Q68D10 685 aaPredicted RBP21.67■■□□□ 1.06
USHBP1-209ENST00000598570 ZNF384Q8TF68 577 aa21.67■■□□□ 1.06
USHBP1-209ENST00000598570 DEFB129Q9H1M3 183 aa21.67■■□□□ 1.06
USHBP1-209ENST00000598570 TLR7Q9NYK1 1049 aaKnown RBP21.67■■□□□ 1.06
USHBP1-209ENST00000598570 PCNTO95613 3336 aa21.67■■□□□ 1.06
USHBP1-209ENST00000598570 CCDC158Q5M9N0 1113 aa21.66■■□□□ 1.06
USHBP1-209ENST00000598570 GORABQ5T7V8 394 aa21.66■■□□□ 1.06
USHBP1-209ENST00000598570 CRBNQ96SW2 442 aa21.66■■□□□ 1.06
USHBP1-209ENST00000598570 GBA2Q9HCG7 927 aaPredicted RBP21.66■■□□□ 1.06
USHBP1-209ENST00000598570 CCDC8Q9H0W5 538 aaPredicted RBP21.65■■□□□ 1.06
USHBP1-209ENST00000598570 TDRD3Q9H7E2 651 aaKnown RBP21.65■■□□□ 1.06
USHBP1-209ENST00000598570 DAGLAQ9Y4D2 1042 aa21.65■■□□□ 1.06
USHBP1-209ENST00000598570 VEGFBP49765 207 aa21.64■■□□□ 1.05
USHBP1-209ENST00000598570 MAP3K11Q16584 847 aa21.64■■□□□ 1.05
USHBP1-209ENST00000598570 PI16Q6UXB8 463 aa21.64■■□□□ 1.05
USHBP1-209ENST00000598570 FAM83AQ86UY5 434 aa21.64■■□□□ 1.05
USHBP1-209ENST00000598570 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.64■■□□□ 1.05
USHBP1-209ENST00000598570 TEPSINQ96N21 525 aa21.64■■□□□ 1.05
USHBP1-209ENST00000598570 PAPPA2Q9BXP8 1791 aa21.64■■□□□ 1.05
USHBP1-209ENST00000598570 MYH2Q9UKX2 1941 aa21.63■■□□□ 1.05
USHBP1-209ENST00000598570 THSD7BQ9C0I4 1608 aa21.63■■□□□ 1.05
USHBP1-209ENST00000598570 RBM5P52756 815 aaKnown RBP eCLIP21.63■■□□□ 1.05
USHBP1-209ENST00000598570 AACSQ86V21 672 aa21.63■■□□□ 1.05
USHBP1-209ENST00000598570 CLASRPQ8N2M8 674 aaKnown RBP21.63■■□□□ 1.05
USHBP1-209ENST00000598570 C2orf69Q8N8R5 385 aa21.63■■□□□ 1.05
USHBP1-209ENST00000598570 SCAF8Q9UPN6 1271 aaKnown RBP21.63■■□□□ 1.05
USHBP1-209ENST00000598570 UNCXA6NJT0 531 aa21.62■■□□□ 1.05
USHBP1-209ENST00000598570 CYP2E1P05181 493 aaPredicted RBP21.62■■□□□ 1.05
USHBP1-209ENST00000598570 HDAC1Q13547 482 aaPredicted RBP21.62■■□□□ 1.05
USHBP1-209ENST00000598570 TNFAIP1Q13829 316 aa21.62■■□□□ 1.05
USHBP1-209ENST00000598570 DIXDC1Q155Q3 683 aa21.62■■□□□ 1.05
USHBP1-209ENST00000598570 TMED8Q6PL24 325 aaPredicted RBP21.62■■□□□ 1.05
USHBP1-209ENST00000598570 NSUN4Q96CB9 384 aaKnown RBP21.62■■□□□ 1.05
USHBP1-209ENST00000598570 IL1RAPL2Q9NP60 686 aa21.62■■□□□ 1.05
USHBP1-209ENST00000598570 MKRN1Q9UHC7 482 aaKnown RBP21.62■■□□□ 1.05
USHBP1-209ENST00000598570 ABT1Q9ULW3 272 aaKnown RBP21.62■■□□□ 1.05
USHBP1-209ENST00000598570 SSC5DA1L4H1 1573 aa21.61■■□□□ 1.05
USHBP1-209ENST00000598570 GPR75-ASB3A0A0A6YYF3 556 aa21.61■■□□□ 1.05
USHBP1-209ENST00000598570 CLRN2A0PK11 232 aa21.61■■□□□ 1.05
USHBP1-209ENST00000598570 MAP4K4O95819 1239 aaPredicted RBP21.61■■□□□ 1.05
USHBP1-209ENST00000598570 MECOMQ03112 1051 aa21.61■■□□□ 1.05
USHBP1-209ENST00000598570 RASA3Q14644 834 aa21.61■■□□□ 1.05
USHBP1-209ENST00000598570 TTC39AQ5SRH9 613 aa21.61■■□□□ 1.05
USHBP1-209ENST00000598570 LDLRAD1Q5T700 205 aa21.61■■□□□ 1.05
USHBP1-209ENST00000598570 PRAMEF18Q5VWM3 479 aa21.61■■□□□ 1.05
USHBP1-209ENST00000598570 SLF2Q8IX21 1173 aa21.61■■□□□ 1.05
USHBP1-209ENST00000598570 FAM155AB1AL88 458 aaPredicted RBP21.6■■□□□ 1.05
USHBP1-209ENST00000598570 NPM3O75607 178 aaKnown RBP21.6■■□□□ 1.05
USHBP1-209ENST00000598570 CDC42EP5Q6NZY7 148 aa21.6■■□□□ 1.05
USHBP1-209ENST00000598570 TBC1D9Q6ZT07 1266 aa21.6■■□□□ 1.05
USHBP1-209ENST00000598570 ERICH6Q7L0X2 663 aa21.6■■□□□ 1.05
USHBP1-209ENST00000598570 IDI2Q9BXS1 227 aa21.6■■□□□ 1.05
USHBP1-209ENST00000598570 LRRCC1Q9C099 1032 aa21.6■■□□□ 1.05
USHBP1-209ENST00000598570 RFX7Q2KHR2 1363 aa21.6■■□□□ 1.05
USHBP1-209ENST00000598570 WDR33Q9C0J8 1336 aaKnown RBP21.59■■□□□ 1.05
USHBP1-209ENST00000598570 MAP2K2P36507 400 aa21.59■■□□□ 1.05
USHBP1-209ENST00000598570 SUPT20HL1Q3ZLR7 823 aa21.59■■□□□ 1.05
USHBP1-209ENST00000598570 ABCF2Q9UG63 623 aa21.59■■□□□ 1.05
USHBP1-209ENST00000598570 SUPT16HQ9Y5B9 1047 aaKnown RBP21.59■■□□□ 1.05
USHBP1-209ENST00000598570 RPAP1Q9BWH6 1393 aaPredicted RBP21.59■■□□□ 1.05
USHBP1-209ENST00000598570 MYO5AQ9Y4I1 1855 aaKnown RBP21.58■■□□□ 1.05
USHBP1-209ENST00000598570 ATP5JP18859 108 aa21.58■■□□□ 1.05
USHBP1-209ENST00000598570 ECE1P42892 770 aa21.58■■□□□ 1.05
USHBP1-209ENST00000598570 ZAP70P43403 619 aa21.58■■□□□ 1.05
USHBP1-209ENST00000598570 HUNKP57058 714 aa21.58■■□□□ 1.05
USHBP1-209ENST00000598570 CAPNS2Q96L46 248 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms