RNA–Protein interactions for RNA: ENST00000598229.1

LINC00343-205, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-205ENST00000598229 BCAMP50895 628 aa12.12□□□□□ -0.47
LINC00343-205ENST00000598229 NBR1Q14596 966 aa12.12□□□□□ -0.47
LINC00343-205ENST00000598229 SLC10A4Q96EP9 437 aa12.12□□□□□ -0.47
LINC00343-205ENST00000598229 PCGF6Q9BYE7 350 aa12.12□□□□□ -0.47
LINC00343-205ENST00000598229 TAF1P21675 1872 aa12.12□□□□□ -0.47
LINC00343-205ENST00000598229 SCN9AQ15858 1988 aa12.11□□□□□ -0.47
LINC00343-205ENST00000598229 MAP3K11Q16584 847 aa12.11□□□□□ -0.47
LINC00343-205ENST00000598229 OTUD7BQ6GQQ9 843 aa12.11□□□□□ -0.47
LINC00343-205ENST00000598229 EFCC1Q9HA90 598 aa12.11□□□□□ -0.47
LINC00343-205ENST00000598229 SCAF8Q9UPN6 1271 aaKnown RBP12.11□□□□□ -0.47
LINC00343-205ENST00000598229 XDHP47989 1333 aa12.11□□□□□ -0.47
LINC00343-205ENST00000598229 MYO3BQ8WXR4 1341 aa12.11□□□□□ -0.47
LINC00343-205ENST00000598229 DLL1O00548 723 aa12.1□□□□□ -0.47
LINC00343-205ENST00000598229 MAP3K7O43318 606 aa12.1□□□□□ -0.47
LINC00343-205ENST00000598229 ATP2B4P23634 1241 aa12.1□□□□□ -0.47
LINC00343-205ENST00000598229 ARHGEF6Q15052 776 aa12.1□□□□□ -0.47
LINC00343-205ENST00000598229 E2F4Q16254 413 aa12.1□□□□□ -0.47
LINC00343-205ENST00000598229 DACT2Q5SW24 774 aa12.1□□□□□ -0.47
LINC00343-205ENST00000598229 NBPF11Q86T75 865 aa12.1□□□□□ -0.47
LINC00343-205ENST00000598229 APOBEC3FQ8IUX4 373 aaKnown RBP12.1□□□□□ -0.47
LINC00343-205ENST00000598229 ZNF333Q96JL9 665 aa12.1□□□□□ -0.47
LINC00343-205ENST00000598229 WDR70Q9NW82 654 aa12.1□□□□□ -0.47
LINC00343-205ENST00000598229 KIAA0100Q14667 2235 aaKnown RBP12.1□□□□□ -0.47
LINC00343-205ENST00000598229 ATP5J2-PTCD1G3V325 749 aa12.09□□□□□ -0.47
LINC00343-205ENST00000598229 H0YGN5 161 aa12.09□□□□□ -0.47
LINC00343-205ENST00000598229 IGF2BP3O00425 579 aaKnown RBP eCLIP12.09□□□□□ -0.47
LINC00343-205ENST00000598229 SP3Q02447 781 aa12.09□□□□□ -0.47
LINC00343-205ENST00000598229 CCDC152Q4G0S7 254 aa12.09□□□□□ -0.47
LINC00343-205ENST00000598229 STRIP1Q5VSL9 837 aa12.09□□□□□ -0.47
LINC00343-205ENST00000598229 ZBTB38Q8NAP3 1195 aaPredicted RBP12.09□□□□□ -0.47
LINC00343-205ENST00000598229 CD99L2Q8TCZ2 262 aa12.09□□□□□ -0.47
LINC00343-205ENST00000598229 SEC31BQ9NQW1 1179 aa12.09□□□□□ -0.47
LINC00343-205ENST00000598229 SEPT9Q9UHD8 586 aaPredicted RBP12.09□□□□□ -0.47
LINC00343-205ENST00000598229 ANGEL1Q9UNK9 670 aaKnown RBP12.09□□□□□ -0.47
LINC00343-205ENST00000598229 RBBP6Q7Z6E9 1792 aaKnown RBP12.09□□□□□ -0.47
LINC00343-205ENST00000598229 HOXB7P09629 217 aa12.08□□□□□ -0.48
LINC00343-205ENST00000598229 PACS2Q86VP3 889 aa12.08□□□□□ -0.48
LINC00343-205ENST00000598229 ZBED3Q96IU2 234 aaPredicted RBP12.08□□□□□ -0.48
LINC00343-205ENST00000598229 DBF4Q9UBU7 674 aaPredicted RBP12.08□□□□□ -0.48
LINC00343-205ENST00000598229 ARIH1Q9Y4X5 557 aaPredicted RBP12.08□□□□□ -0.48
LINC00343-205ENST00000598229 MAPK8IP3Q9UPT6 1336 aa12.08□□□□□ -0.48
LINC00343-205ENST00000598229 COL4A1P02462 1669 aa12.07□□□□□ -0.48
LINC00343-205ENST00000598229 TESPA1A2RU30 521 aaPredicted RBP12.07□□□□□ -0.48
LINC00343-205ENST00000598229 PPP1R12BO60237 982 aaPredicted RBP12.07□□□□□ -0.48
LINC00343-205ENST00000598229 CRHR2Q13324 411 aa12.07□□□□□ -0.48
LINC00343-205ENST00000598229 PRKG1Q13976 671 aa12.07□□□□□ -0.48
LINC00343-205ENST00000598229 RTL5Q5HYW3 569 aaPredicted RBP12.07□□□□□ -0.48
LINC00343-205ENST00000598229 SLC17A8Q8NDX2 589 aa12.07□□□□□ -0.48
LINC00343-205ENST00000598229 ZNF428Q96B54 188 aa12.07□□□□□ -0.48
LINC00343-205ENST00000598229 WNK4Q96J92 1243 aa12.07□□□□□ -0.48
LINC00343-205ENST00000598229 DEFB129Q9H1M3 183 aa12.07□□□□□ -0.48
LINC00343-205ENST00000598229 HYPKQ9NX55 129 aa12.07□□□□□ -0.48
LINC00343-205ENST00000598229 CHPF2Q9P2E5 772 aa12.07□□□□□ -0.48
LINC00343-205ENST00000598229 CHL1O00533 1208 aa12.06□□□□□ -0.48
LINC00343-205ENST00000598229 PDE8AO60658 829 aa12.06□□□□□ -0.48
LINC00343-205ENST00000598229 RIPK4P57078 832 aa12.06□□□□□ -0.48
LINC00343-205ENST00000598229 LMOD3Q0VAK6 560 aa12.06□□□□□ -0.48
LINC00343-205ENST00000598229 ANKRD18AQ8IVF6 992 aa12.06□□□□□ -0.48
LINC00343-205ENST00000598229 COA1Q9GZY4 146 aa12.06□□□□□ -0.48
LINC00343-205ENST00000598229 PPP2R3BQ9Y5P8 575 aa12.06□□□□□ -0.48
LINC00343-205ENST00000598229 COL1A1P02452 1464 aaPredicted RBP12.06□□□□□ -0.48
LINC00343-205ENST00000598229 CENPFP49454 3210 aa12.06□□□□□ -0.48
LINC00343-205ENST00000598229 TRIOBPQ9H2D6 2365 aa12.06□□□□□ -0.48
LINC00343-205ENST00000598229 DLG5Q8TDM6 1919 aa12.05□□□□□ -0.48
LINC00343-205ENST00000598229 MED23Q9ULK4 1368 aa12.05□□□□□ -0.48
LINC00343-205ENST00000598229 A0A0C4DFX4 3053 aa12.05□□□□□ -0.48
LINC00343-205ENST00000598229 SASH1O94885 1247 aa12.05□□□□□ -0.48
LINC00343-205ENST00000598229 PCCAP05165 728 aaPredicted RBP12.05□□□□□ -0.48
LINC00343-205ENST00000598229 SLC4A8Q2Y0W8 1093 aa12.05□□□□□ -0.48
LINC00343-205ENST00000598229 SUPT20HL1Q3ZLR7 823 aa12.05□□□□□ -0.48
LINC00343-205ENST00000598229 SLC9C1Q4G0N8 1177 aa12.05□□□□□ -0.48
LINC00343-205ENST00000598229 LRCH3Q96II8 777 aa12.05□□□□□ -0.48
LINC00343-205ENST00000598229 CLMNQ96JQ2 1002 aa12.05□□□□□ -0.48
LINC00343-205ENST00000598229 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.05□□□□□ -0.48
LINC00343-205ENST00000598229 PSME4Q14997 1843 aa12.04□□□□□ -0.48
LINC00343-205ENST00000598229 CEP290O15078 2479 aa12.04□□□□□ -0.48
LINC00343-205ENST00000598229 TSR1Q2NL82 804 aaKnown RBP12.04□□□□□ -0.48
LINC00343-205ENST00000598229 HDGFL1Q5TGJ6 251 aa12.04□□□□□ -0.48
LINC00343-205ENST00000598229 TTLL5Q6EMB2 1281 aa12.04□□□□□ -0.48
LINC00343-205ENST00000598229 MTMR14Q8NCE2 650 aa12.04□□□□□ -0.48
LINC00343-205ENST00000598229 CCDC191Q8NCU4 936 aa12.04□□□□□ -0.48
LINC00343-205ENST00000598229 PTPN18Q99952 460 aa12.04□□□□□ -0.48
LINC00343-205ENST00000598229 MXD3Q9BW11 206 aa12.04□□□□□ -0.48
LINC00343-205ENST00000598229 BSDC1Q9NW68 430 aaPredicted RBP12.04□□□□□ -0.48
LINC00343-205ENST00000598229 SZT2Q5T011 3432 aa12.04□□□□□ -0.48
LINC00343-205ENST00000598229 WTIPA6NIX2 430 aaPredicted RBP12.03□□□□□ -0.48
LINC00343-205ENST00000598229 CAP1Q01518 475 aa12.03□□□□□ -0.48
LINC00343-205ENST00000598229 CDC5LQ99459 802 aaKnown RBP12.03□□□□□ -0.48
LINC00343-205ENST00000598229 RBM27Q9P2N5 1060 aaKnown RBP12.03□□□□□ -0.48
LINC00343-205ENST00000598229 TSR3Q9UJK0 312 aaKnown RBP12.03□□□□□ -0.48
LINC00343-205ENST00000598229 MINPP1Q9UNW1 487 aa12.03□□□□□ -0.48
LINC00343-205ENST00000598229 LEMD3Q9Y2U8 911 aa12.03□□□□□ -0.48
LINC00343-205ENST00000598229 TMPOP42166 694 aaKnown RBP12.02□□□□□ -0.49
LINC00343-205ENST00000598229 IREB2P48200 963 aaKnown RBP12.02□□□□□ -0.49
LINC00343-205ENST00000598229 CCT4P50991 539 aaKnown RBP12.02□□□□□ -0.49
LINC00343-205ENST00000598229 DLGAP5Q15398 846 aa12.02□□□□□ -0.49
LINC00343-205ENST00000598229 KRT24Q2M2I5 525 aa12.02□□□□□ -0.49
LINC00343-205ENST00000598229 RIC3Q7Z5B4 369 aa12.02□□□□□ -0.49
LINC00343-205ENST00000598229 ANKRD13AQ8IZ07 590 aa12.02□□□□□ -0.49
LINC00343-205ENST00000598229 PRO3102Q9H379 93 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms